Dendroctonus ponderosae (mountain pine beetle): 109537318
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Entry
109537318 CDS
T04899
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2
KO
K03231
elongation factor 1-alpha
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109537318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109537318
03016 Transfer RNA biogenesis [BR:
dpa03016
]
109537318
03012 Translation factors [BR:
dpa03012
]
109537318
04131 Membrane trafficking [BR:
dpa04131
]
109537318
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpa04147
]
109537318
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109537318
Transfer RNA biogenesis [BR:
dpa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109537318
Translation factors [BR:
dpa03012
]
Eukaryotic type
Elongation factors
109537318
Membrane trafficking [BR:
dpa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109537318
Exosome [BR:
dpa04147
]
Exosomal proteins
Proteins found in most exosomes
109537318
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GRIP
CCDC39
ATG16
ADIP
SlyX
ANG-1
CCDC89
GTP_EFTU_D4
Imm27
Motif
Other DBs
NCBI-GeneID:
109537318
NCBI-ProteinID:
XP_048520691
LinkDB
All DBs
Position
Unknown
AA seq
1768 aa
AA seq
DB search
MEPTEGKKINLEDLPKEDLVKKCKSLISLAQKAKTSKESLQEEINSLKKQLNQATQNDAT
IELIESLTSEKLQLVNQIEDLKVKNHSLNSKLKSFEEKVTDLETENTSYQRQAKRLTDEN
EQLISDLSTLETQIAELHKLGVEQKGQLLELEKSNTNSIKDLQSKLAISVEEVQKLNANL
ASKEQQISGLTQELQALKIIKNTSLQESDTSCDSYIKEIDELKIRNDGYITELSSIKDVN
EKLKEKVTLYHSKLKKFALNIKEVKNEKNGIIELFKACTEQIHEWKVQLLKASAELIKLV
NQLQDENQKLKQNAENPEIKLELDKCNQQLISQNEDIQRLNAELAEKVKISENLARIAHE
NENLNNVCLTYKEKLEILNQELKESQCKYEAENNLLIASKEEVNKLNEALRQSVNTEKRL
AEESSEEILRLARSNKSLEEQLQELQEKLSLKESKVHVDSSVQANEDTSSSQNSADENSI
QDLKREHVELLQEMNEMNQALKERGETISKLEAHCEEIKKKLQLYETQANKNVEFITAKD
ETIKELSKELDSLRNNNPPVESNASRELEIANLKSEIEALRSKLQNNMDTSYAESETMST
STISRYEETNRLKELEGSWEERYGKLRTLAIKLKANIRDQANAIKEHEKVREDLLKTQSN
NLKIIQSLQAEIDKLQDDLEKANAEKKQYLNKLNSTAENISKDKQLLAANEETISQLKKE
IAMLNAGQQQVDNWKKQVSAKVQTLRKDAEAKNILLKELEGKVSKLESDVESKAVQLKNE
QESHRQTKSLLEQTSSERKKNSVLSLEMQDYERSVKELSQKIDKHVSEISNLQTQLDSQR
NTVNVLREQNKILEARIKQEENNGQSSSLEVASCRRNIANLEDLIQQKEQKIVDVTKQLE
IARSDNEELSTELSKVIAEHQKTLSNTKAERDQLRNQQSGLQQNVRELKDTLKLREDELS
AIKGDYESYKVRAQSVLKKSQNRDLGLEEKLSEELTTARSLNTNLSDELKESREKLQRDE
EINKALATEKDRLSKKVTELETEVQDLKNYNEQLEAKHQKTVSEHAETVRNLKVHAETLS
QCYRQQISDQEVRHNREIIELQSQLDKTPSPLDTLPEHPNMPREDGEGSESIESTHLSSS
VHPIPLERLLDSRSDDEILLLKKSLSEQESKVVHLTALLSDTEQDLAKHVQMNKVLKEEI
RRQQRSVEREKHADNLEYLKNVVFKFVTLSTGDERSRLVPVLNTILKLSPEETQKLTMVA
KGDPGLKGWTSYLPTWSSPNKPQYCLNLAPHSNPSLIRKLKSCLLLNMGREKTHINIVVI
GHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI
DIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
REHALLAVTLGVKQLIVGVNKMDSTEPPYSEVRFEEIKHEVCSYIKKIGFNPNGVPFVPI
SGWHGDNMLEPSEKMPWFKGWSIERKEGKADGKTLIEALDAILPPSRPTEKALRLPLQDV
YKIGGIGTVPVGRVETGILKPGMVVTFAPVGLTTEVKSVEMHHEALQEAVPGDNVGFNVK
NVSVKELRRGFVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA
EIKEKCDRRSGKVTEENPKFIKTGDAAFVNLVPSKPMCVESFQEFPPLGRFAVRDMRQTV
AVGVIKQVNFKDTAGKVTKAAEKAQKKK
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaccgaaggcaaaaaaataaacttggaagacttgccaaaggaggatttagtt
aaaaagtgcaaatcgttaatatccttggctcaaaaagctaaaacctctaaagagagcttg
caggaagaaatcaacagtctgaaaaagcaactcaatcaggcaactcaaaacgatgccacc
attgaacttatcgaaagtctaaccagtgaaaaattacagctggtgaaccaaattgaagat
ctaaaagtgaaaaaccacagcttgaactcaaaactgaaatcatttgaagaaaaagtcact
gatttggagacagaaaatacctcgtaccagaggcaagctaaaaggctaactgacgaaaac
gaacagctaatttccgatttatcaacccttgaaacgcaaatagcggagcttcacaagcta
ggcgtagaacagaagggccaattactagaattggagaaatcaaacaccaatagcatcaag
gatctacagagtaagttagcaattagtgtggaggaagtccaaaaactcaacgccaatcta
gcgagtaaagagcaacaaatatcaggattaactcaagagttgcaggctttaaaaattatt
aaaaacacttccttgcaggaaagcgatacaagttgtgatagttacattaaggaaatagat
gaacttaaaattaggaacgatggctatattacagaattgtcaagtattaaagatgttaac
gaaaaactgaaagaaaaggtcacattgtaccattcaaaactgaaaaaatttgccttgaac
atcaaggaagttaaaaatgagaaaaacggaattattgaactgttcaaagcctgcactgaa
cagattcatgaatggaaagtgcaactacttaaagcgagtgccgaacttatcaaactagtc
aatcagcttcaggatgaaaatcagaagcttaaacaaaacgcggaaaatccggaaatcaaa
ctggaattggataaatgcaaccaacaactaatcagccagaacgaagatatccaaaggctc
aatgcggaacttgctgaaaaggttaaaatctcggaaaatttggccaggattgcgcacgaa
aatgaaaacctcaacaatgtctgtctcacctacaaagaaaaactggaaatcctcaatcag
gaactgaaagaatcccaatgcaaatatgaagctgaaaataatttgcttatcgcctccaaa
gaggaagtgaataagttaaacgaagccctgagacaatcggtgaataccgagaaaaggtta
gcagaagagtctagtgaggaaattctcagattagctcgaagtaataaaagccttgaagaa
caacttcaagaacttcaagagaaactcagcttaaaagaaagcaaagtccacgtggatagc
tcggttcaagccaatgaagacacatcttcatcacagaattctgctgatgaaaatagtatt
caagatttgaagagagaacatgtcgaactgctacaagagatgaacgagatgaaccaagct
ctaaaagagcgaggagaaacaatatccaagctggaagctcactgtgaggaaatcaagaaa
aaacttcagctgtatgagacgcaggcaaataaaaacgtggaatttataacagcaaaagac
gaaactattaaggagctttcaaaggagctagattctttacgaaataataacccgcctgtt
gaaagcaacgcgagcagggagcttgaaattgcaaatttaaagtccgaaattgaggctcta
agaagcaaactacagaataacatggacacaagctatgcagaaagtgaaaccatgtcgacg
tcaactatatcaagatacgaagaaaccaatcggttgaaggaattggaaggctcttgggaa
gagagatatggaaaactcagaacattggccatcaaactgaaggcgaatattcgagatcaa
gcaaacgccataaaagagcatgaaaaagtgcgcgaggacttattgaaaacgcaatcaaac
aatctgaaaattatccaaagtttgcaggcagaaatcgacaaacttcaagacgacctggag
aaggcgaatgcagagaaaaagcaatacttaaacaagttaaattccacagccgaaaatata
tcgaaagacaaacaattgctggcagcaaatgaagaaacaatttcgcagttaaagaaggaa
attgcaatgcttaatgctggccagcaacaggtcgataactggaaaaagcaagttagcgct
aaggttcaaacattgagaaaagatgcagaagctaaaaacatcttattaaaagaactggaa
ggtaaggtgtcaaagttggaaagcgatgtggaaagcaaagccgttcaattgaagaacgaa
caggaaagccacaggcagacaaagagccttttggagcaaactagttcggagcgtaagaag
aactcggttctcagcctggaaatgcaggactatgagcgaagcgtgaaagaattgtcgcag
aagattgataaacacgttagtgaaattagcaatttgcagactcagctggattcgcagaga
aacacggtcaatgttttacgagagcagaataaaatcctagaagcaagaataaagcaggag
gaaaacaatggccaaagcagttcactagaagtggcaagttgcagaaggaatattgccaat
ttggaggatctaatacagcaaaaggagcaaaaaattgtcgatgtcactaagcaattagaa
atcgcacggtccgacaacgaagaactttccactgagttatccaaagttattgcagaacat
cagaagaccctcagtaatacaaaggctgaacgggaccagttgagaaatcagcaatcaggc
ctacagcagaatgtgagggagctaaaagacacactcaagttgagagaggatgaattaagt
gccattaagggggactatgaaagttacaaagtgcgagctcagagcgtactgaagaagagc
caaaatcgagacctggggctcgaagaaaaattgtctgaagaactcaccactgccagatcg
cttaatacgaacttgagcgatgagctaaaagagtctagagaaaagctccaaagggacgaa
gaaattaataaagcacttgcaacagaaaaagaccgattgagtaaaaaagtaaccgaacta
gaaacagaagtccaggacttgaagaactacaacgagcaactggaggctaaacaccaaaaa
acagtcagtgaacatgcggagactgtcaggaatttaaaggtgcacgcagagacgctatct
cagtgttaccgccagcagatctccgaccaagaggttcgacataatagggaaattatcgag
cttcaaagtcagctagataagacaccttcaccactggacactcttcccgagcatccgaac
atgcccagggaggacggcgagggctcggagagcatagaaagcactcacctctcaagcagt
gtacacccaattccattggaacgattacttgattccaggtcagacgatgaaatactgctt
ctgaagaaatcactttcagaacaggaatccaaagttgtgcatttaacagcgttgctatct
gatactgagcaggatttggctaagcatgtgcagatgaacaaggtgctgaaagaggagatt
cggaggcagcaaagatcggttgaacgagaaaaacatgccgacaatctggagtacttaaaa
aatgtagtttttaagtttgtgacgttaagtacgggagatgagagaagcaggttggtgcca
gtattgaatacgatcctaaagttgagtcctgaagaaacgcaaaaattaaccatggtggcc
aaaggcgatcctggacttaaaggatggaccagttacctgccgacttggtcgtcgcccaat
aaaccgcagtattgtttgaatttggcgccccatagcaacccttcgttaatcagaaaatta
aaatcgtgcttattgctcaacatgggtagagaaaaaacccatattaacattgtcgtgatt
ggccacgtggattctgggaaatccacctccactggccatttgatttacaaatgcggtggt
atcgataaacgtacaattgaaaagtttgaaaaggaagcccaagagatgggcaaaggatcc
ttcaagtatgcctgggtgctggataagctgaaggccgaaagggaaagaggcattaccatc
gatattgccttatggaagtttgaaactgctaagtactatgtcactattattgacgcccct
ggacatagggatttcatcaagaacatgattactgggacttcgcaagcggactgtgctgtt
cttattgtagccgctggcaccggggagtttgaggctgggatatcgaagaatggacagact
agagaacatgctttgctcgctgtcactctaggggtcaagcaacttattgtgggcgttaac
aaaatggacagcactgagcctccatattccgaagtgcgtttcgaagaaatcaaacacgag
gtgtgttcctacatcaagaaaattgggttcaatcccaacggtgttcctttcgtgccaatt
tctggatggcatggcgacaacatgcttgaacccagcgaaaagatgccttggttcaagggc
tggtcgattgaacgcaaagaagggaaagccgacggtaaaactctaattgaggccctcgac
gccatcctgcctccttctcggccaactgaaaaggccctcagattgcctcttcaggatgtt
tacaagattgggggcatcggcaccgtgccagtgggacgagtggaaacgggaattttgaag
ccaggaatggtggtgacgtttgctcctgtaggtctaactaccgaggtaaagtcagtcgag
atgcaccacgaagcattgcaagaagctgtaccgggagacaatgtgggattcaacgttaag
aacgtctcagtcaaggagttgaggcgcggatttgttgctggcgattcgaaaaataatcct
cccagaggtgctgctgatttcactgctcaggtcattgtgttgaatcatccaggacagata
tcaaatggttatactccggttctggattgtcacaccgctcatatcgcttgcaaatttgct
gagatcaaggaaaagtgcgatcgccgatctggaaaagttactgaagaaaaccccaagttt
attaaaacgggggacgccgcctttgtaaatttggtgccgtctaagcccatgtgtgttgag
tcgttccaggagtttccgccgttgggtcgtttcgccgtgcgcgacatgcgtcaaaccgta
gctgtgggggtgattaagcaggtgaactttaaagacaccgctggtaaagttacgaaggct
gccgagaaggcccaaaagaagaaataa
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integrated database retrieval system
