Dendroctonus ponderosae (mountain pine beetle): 109537576
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Entry
109537576 CDS
T04899
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109537576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109537576
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109537576
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
109537576
NCBI-ProteinID:
XP_019759929
UniProt:
J3JWL2
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MVLFKDMSSQQSPSNSTFEREKVFQWILELTSPETRENALFELSKKREIVADLAPMLWNS
FGTIAALLQEILIIYPAINPPTLTAHESNRVCNALALLQCVASHPETRSNFLVAHIPLFL
YPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMETGSELSK
TVATFILQKILLDESGLSYICQTYDRFSHVAMILGKMVLSLAKDPSARLLKHVVRCYLRL
SDNPRAREALRQCLPDQLRDSTFNNCLQEDKSTKHWLQQLIRNLDSTAASDPRQVGMSPL
ATQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggtgttattcaaagacatgagttcccaacagagtccatcaaattcaacgtttgagcgt
gagaaagtgtttcaatggattttggagttgaccagtccagagactagagaaaatgccctg
tttgaacttagtaagaaaagagaaattgtggccgacttggctccaatgctatggaacagc
tttggaacgattgccgctttgctgcaagagattctcatcatctatccagcgattaatcct
cccacgttgacggcgcatgaatccaatagggtttgcaatgctttggcccttctgcaatgt
gtagcgtcgcatccagagaccagatccaactttttagtggcgcatatcccgctctttctt
tatccatttttgcacaccgtgtccaaaaccagaccatttgagtacttgcgcttaacaagt
ctgggcgttattggcgctttagttaagaccgatgaacaagaagtgattacttttctgttg
acgacggaaattattccactgtgtctcaggataatggaaacgggatcggaactcagcaag
acagtagctacgttcatcttacagaagattcttttggacgagagcggattgtcttacatt
tgtcagacctatgatcgatttagtcacgtggcaatgatcttgggcaaaatggttctatct
ttagccaaggacccttctgcacgattgttgaagcatgttgtcaggtgttacttgcgacta
tccgataacccaagagcacgtgaagctcttcggcaatgtcttcctgatcagttgcgggac
agcacgttcaacaactgccttcaagaagacaagtctactaagcattggctgcagcagtta
ataaggaacttagactcaacagcagctagtgatcccagacaagtgggcatgtcgccattg
gctacacagtaa
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