Dendroctonus ponderosae (mountain pine beetle): 109537658
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Entry
109537658 CDS
T04899
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109537658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109537658
03041 Spliceosome [BR:
dpa03041
]
109537658
03036 Chromosome and associated proteins [BR:
dpa03036
]
109537658
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109537658
Spliceosome [BR:
dpa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109537658
Complex B
109537658
Complex C
U2 SnRNP specific factors
109537658
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109537658
TFTC complex
109537658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
WDR55
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
109537658
NCBI-ProteinID:
XP_019760025
UniProt:
N6U8X0
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MYLYNLTLQRATSITHAVHGNFSGQKSQEIVIARGKSIELLRPDPNTGKMHTLLTIEIFG
VVRSMMAFRLTGGTKDYVVIGSDSGRIVILEYQPQKNNFEKIHQETFGKSGCRRIVPGQY
LATDPRGRAVMIGAIEKQKLTYILNRDDHARLTISSPQEAHKSNTLVYHMVGVDVAYDNP
IFACLEIDYEEADIDPSGEAAQKTQQTLTFYELDLGVNHMVRKYSEPLEEHANFLVMVPG
GEDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLEVDRGMVTEIKLKYFDTVPVATSMSVLKTGFLFVACEFGNHYLYQ
IAHLGDDDDELEFSSAMPLEEGDTFFFAPRTLRNLVLVDEIESLSPILSSRVADLAGEDT
PQLYMLCGRGPRSSLRVLRHGLEVSEMAVSGLPGNPIAVWTVKKRSDDEFDAFIIVSFVN
ATLVLSIGETVEEVHDSGFQGITPTLSCSALADDALLQVYPDGMSHICANKRVNKWNAGK
KAIVECAVNQRQVVIALAGGELVYFEMDPTGSLHEYEKRKRMNSDVLCMALGSVPPGEQR
SWFLAVGLSDSTVRIISLDPADCLAERAMQPLPNCAQSLCVVEMGGGHETEGSGNQGGST
LYLYIGLQNGALLRTVLDPVTGDLTDTRTRYLGSRPVKLFKIRMQNSEAVLAMSSRSWLS
YYYQSRFYLTPLSYESLEYASGFSSPQCPEGIVAISTNKLRILALEKLGAVFNQISFPLE
YTPRKFIIHPESNNLMILETEHNAYTDDTKKQRRLQMAEEMKEAAGEDEQELAKEMADAF
LNEDLPENVFSAPKAGHGMWASQLKIMDPVTGHLYKLIKLEQNEAAMSLTLVKFHGQPEH
QWFLVLGVAKDFQLNPRVCNQGFLDTYKVDPMGKELELVHRTMVGEVPTALCAYNGRLLA
GVGRMLRLYDMGKKKLLRKCENKHIPNAIVNIQAIGKRIFVADVQESVFMVRYKRAENQL
IIFADDTHPRWITSTCILDYDSIATADKFGNISILRLPPNVTDDVEEDPTGNKALWDRGL
LNGASQKANTIATFQVGEAVTWLQKTTLIPGGSESLIYTTLSGTVGVLVPFTSHDDHDFF
QHLEMHMRSENSPLCGRDHLSFRSYYFPVKNVIDGDMCEQYNSLEPAKQKSIANDLDKTA
AEVSKKLEDIRTRYAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgtacaacttgaccctgcaaagggcgacctccattactcatgcggtgcacggc
aacttttccggccagaaatcgcaagaaattgtaattgctcgcggcaagagcattgagctg
ttgcgacccgatcctaataccggaaaaatgcacacgctgcttaccattgaaatttttggc
gttgtaaggtcgatgatggcttttcgactaactggcggaactaaagactatgtggtgatt
ggctcggacagcggccgcattgttatcctcgaataccaaccgcagaagaataactttgaa
aagattcatcaggagacgtttggcaaaagcggctgcaggcggatcgtccctggacagtat
ttggcaacagacccgcgggggcgggctgtaatgattggcgccattgaaaaacagaagctg
acctacattttgaaccgagatgaccacgcccgcttgaccatctcttcgcctcaggaggcg
cacaagagcaacaccctggtctaccacatggtgggggtagatgtcgcctacgacaatccc
atatttgcctgtttggaaatcgactacgaagaagccgatatcgatccgtccggcgaagcc
gcgcaaaagacccagcaaaccttgacgttctacgagctggacctgggggttaaccatatg
gtgcgcaagtattccgagccgttggaggagcacgccaatttcctagttatggtgcctggg
ggcgaagatggtccctccggggtgctgatttgctcagaaaattatctgacctataaaaac
ctgggagaccagcacgatatccgttgcccaatcccgcgccgccgtaatgacctggacgat
ccagaaagagggatgattttcgtgtgctcagccacccacaagaccaaatccatgttcttc
ttcctggcccaaaccgagcagggcgacatcttcaaaatcaccctggaagtagatcgggga
atggtcacggaaatcaagctaaagtacttcgacactgtgccagtggccacctcgatgtct
gtgttgaaaaccggcttcctctttgtggcctgtgagtttggcaaccactacctataccaa
atcgcccatttgggcgacgacgacgacgagctggagttcagctcggccatgccactagaa
gagggtgacacatttttcttcgccccgcgaacgctccgcaacttggtgttggtcgacgaa
atcgaaagtttatcgcccatcctttcgtcgagagtcgcggacttggcaggcgaagacacg
ccgcagctctacatgttatgcggccgcgggcccagatcctccctaagggtgctaagacac
ggcctggaagtgtctgaaatggccgtgtccggattgcccggcaatcccatcgccgtctgg
acggtgaagaagcgcagcgacgacgagttcgacgcctttatcatcgtctccttcgtcaac
gccactctggtgctctccatcggcgaaaccgtggaagaggttcacgacagcggctttcaa
ggcatcacccccacattgtcgtgttccgccctcgcggacgacgccctactgcaagtctac
cccgacgggatgagtcacatctgcgcaaacaaacgcgttaacaaatggaatgccgggaaa
aaggccatagtggaatgcgcagtcaatcagcgccaggtcgtcattgccctggccgggggc
gaactagtctacttcgaaatggaccccacagggtctttgcacgaatacgaaaagcgcaaa
cgaatgaactcggatgtgctctgcatggccttaggcagcgtcccccctggggagcaacgc
tcttggttcctagctgtaggcctttcggatagcacagtccggattatatccctggatcca
gcggattgtttggctgagcgcgccatgcagccgttgcccaactgcgcccagtcgctctgt
gtcgtggaaatgggcggcgggcacgagactgaaggctccggcaatcagggcggcagcacc
ctttacctgtacatcgggctgcagaacggcgccctcttgaggactgtgttggacccggtg
actggtgatctaaccgacacacgaacccgatacttgggctcccggccagtgaaactgttc
aagatccgcatgcaaaactccgaagcggtgctggccatgagcagccgctcttggctcagc
tactactaccagagccgcttctatctcactcctttgtcctatgagagtctggaatacgct
tccgggttcagctcgccgcagtgcccggagggcatcgttgcgatctccaccaataagttg
aggattctggccttggagaaactaggggcggtgttcaaccagatttcattccccttggag
tacacgccgcgcaagttcatcatccaccccgaatcgaacaacttgatgatcctcgaaact
gagcacaacgcctatacggacgacacgaaaaaacagcgccggctgcagatggccgaagag
atgaaggaggcggccggggaagacgagcaggagctagcaaaggagatggctgatgcgttt
ctcaacgaggacctgccggagaatgtcttctccgcccccaaagccgggcatggcatgtgg
gcttcccagctgaagataatggaccccgtgacgggccatttgtacaagctgatcaagctc
gagcagaacgaagccgctatgtcgctcaccttggtgaagtttcacggacagccggaacac
caatggttcctggtgctgggagtggcaaaggatttccaactcaacccccgcgtatgcaac
caggggttcttggacacctacaaagtggaccccatgggcaaggagcttgagctggtgcac
cgcacaatggtgggagaggtcccgacggcactctgcgcatacaacggccgcctactagct
ggggtggggcgcatgttgcgcctctacgacatgggaaaaaagaaattgctacgcaagtgt
gagaacaagcacattcccaacgccattgtcaacatccaggcgatcggaaagagaatcttt
gtggctgatgttcaagagtcagtgttcatggtgcgctacaagcgcgcagagaatcaactg
attatctttgctgatgacacgcacccccgatggatcaccagcacctgcattctggactac
gactcgattgccactgcggataagttcggcaacatttcgatcctgcggctgcctcccaat
gtgacggacgatgtggaggaggatccgacgggcaacaaggccttatgggaccgcgggctg
ttaaacggcgcctcgcaaaaggccaacacgatcgccacctttcaagtaggcgaggcggtc
acttggctgcaaaaaaccacgctgataccgggaggcagcgagagtttgatctataccacg
ctgtcggggacggtgggggtcttggtgcccttcacctcccatgacgatcacgacttcttc
cagcacctggagatgcacatgaggagcgagaactcgccgctgtgtgggcgcgatcacttg
tctttccgcagctactactttccggtaaaaaatgtgattgatggggacatgtgcgagcag
tacaactcgctggagccggccaagcagaagagcattgctaacgatctggataagacagcg
gcggaggtctccaagaagctggaggatattcggacgcggtacgcgttctaa
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integrated database retrieval system
