Dendroctonus ponderosae (mountain pine beetle): 109538451
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Entry
109538451 CDS
T04899
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109538451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109538451
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109538451
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
109538451
NCBI-ProteinID:
XP_019761253
UniProt:
A0AAR5PJP1
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MEQACTYKDLLLRKLSYAVTSSVFSQLFILQFYVFLFNTNVFYPLEWMQRTFRTMTSIST
WIFMVPFLAIIFAQCVICAKDYVVKSSYCSTRFQKFLRAFSLHNIILLLLHIIVGATSTW
LFLSISDGQYNNLTEVCKGNAYCLNEGSFFLILSGLWTGFYFFLKVYVAEKNLAFPVIHQ
RKFLQLKSQLGPIIRESAHLSFWPSFYFGLIYFIVGDLLASIFKDAFALLDREERPTALI
YSHLWFFSALYYFNMNLMRFYFNLFLTEPVQFPVVNAQLGTSLTLQDSITNYDWPIVQNL
ACLDLHLLSRWSPVRRQAFFALSNPGGHPHNWNSLVENVLKLVTEYTQLLNKTIDLPEKK
VVPPIIQAPIIQGPDKFRNLRNMALLDEDCYSYIDISKSAPVEFSFKPNVLDGISAKLKS
IWNFLKLITGVNFLFGELPQANVRKCLANGNLIIWSSQGISDIIAASLDEDKFGIVQKDL
PVIISSLVQLKQSLDKLNKVPALTRKMVGYDDFNYRMKGAVTTAVRRSLFNICRSFNDYL
RDIPLSKDIFQYLQVQIICKS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcttgtacctacaaggatttgctgctcaggaaactgtcctatgctgtaacg
tccagtgtgttttcccaactgttcatattgcagttctacgtgttcctgttcaacaccaac
gtgttttatccgctagaatggatgcaaagaacgtttcgaaccatgacgtccatcagcaca
tggattttcatggtgccatttctggcaattatctttgctcagtgcgtgatttgtgctaaa
gactatgtagtgaaatcgtcatattgttcaacaagattccagaagtttttacgtgccttt
tccttgcacaacatcatcttactgctgctgcacattatagttggagccacttcgacctgg
ctgtttttgtccatatccgatggacaatataataatttgactgaggtatgcaagggaaac
gcttactgccttaacgagggatcgtttttcctcattctaagtggtctgtggacaggattt
tactttttccttaaagtgtatgtcgccgagaagaatctagcatttccagttatccaccag
agaaagtttctgcaattgaaatcacaattgggaccgataatccgtgagtctgcacatcta
tctttctggccgtcattctactttggcttgatatatttcatcgttggagacctgcttgcc
agtatttttaaagacgcatttgcattgctagaccgtgaagagagacccacagctttaatt
tacagccatctgtggttcttcagtgctctttactacttcaatatgaatttaatgaggttt
tatttcaatttattcttgacagaaccagtgcagtttccagtcgttaatgcccagttagga
acaagcttaacattacaagacagcatcacgaactatgattggccaattgtgcaaaatttg
gcctgtttagatctgcatttgctgtcgcgatggtcgcctgtaaggagacaagctttcttc
gctttatcaaaccctgggggacatccacataattggaattctttggtggagaatgttttg
aagcttgttactgaatatacccaattgttgaataaaaccatcgatctgcccgagaagaaa
gtcgtgccaccgatcattcaggctccgataattcaaggtccggataaattcaggaatttg
aggaatatggctttacttgacgaggactgttatagttatattgatatttccaagagcgct
cctgtagaattctcctttaagccaaacgttctggacggcatttcggcaaaactgaaatct
atctggaacttcctcaaactaataacgggagtaaactttctatttggtgaactgccacaa
gccaacgttagaaaatgcctggcaaatggtaacttaattatttggtcctcgcaaggcatt
tcggatatcattgccgcctctttggacgaagataagttcggcatagtccaaaaggatcta
ccagtgataatttctagtttggttcaactaaagcaaagcctggacaagctgaataaagtg
ccagcccttacaaggaaaatggtcggatatgatgactttaactacagaatgaaaggcgcg
gtaactacagcagttagaagaagcctttttaatatatgcaggagtttcaatgactattta
cgagacattcccctaagcaaggacatttttcaatacttgcaagtgcaaattatttgtaaa
agctag
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