Dendroctonus ponderosae (mountain pine beetle): 109538532
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Entry
109538532 CDS
T04899
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109538532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpa03036
]
109538532
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
109538532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
Herpes_UL7
PHDvar_NSD
WSD
Motif
Other DBs
NCBI-GeneID:
109538532
NCBI-ProteinID:
XP_048526419
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MASEADASCEEDPNFAVICAFFEKFGQLIGITDVDFCELRSMLENTYEVSQYLIDLHIKL
LRKIKRTASPPEKWEKFLIKFCHTFSSLEAWQVERFGYKKAKLATKVRVLKELLEAQFDF
NSKFKIEVNKLSSKELRAEPLGRDKFGHAYWFQSDENYQIRVYKEDLDDEKWTLVAKDRG
GLLSLIATLSEGETKLSSDSAGNEDSNSLSEKPIIDTGQQDTDSKKTSDDEDLALDNKEI
EPAKDESPVEAVAKDEAPESKSPEPDSEETVLRKFKIKTLEVSLSDINAKEAVAEGAIQE
PVMRIEGEGSGADNESFIIGDIIEEGVMYFQGRGSGEDCQTGNSSEETENGPTKSETETH
DQVKELESKAVEAQEETLDKPAKDELDANKAPENTEPQSNGESKQATAGNNSEEITASEE
PVALKPTADLEEAPEAVINEPKCEKKQAYTCGKEEENGKQTPVVEIVDVSNNGHLEELEV
VKDSGSPHSSNGKSQEQDPLADDQPVAGNDSESLQTANEPKALKGASAESSITNSPSETV
EENSPISMVELTPGESCDGPRETTLNAPPSEEPEAAKLVPEKNILSFSLDFKDSPSPPAD
SVQKPSPMRAVRKRGLEASATKAQESDDNPGKRMKLKGRRQVDAALRKSVEQRIEQLHGS
SSDSKESEEESQEPKKAGRFAKKKPSKAEESDDSSSKKSAKKAGKKHSRMLLGLQIGDDS
FSEERPQLRQSRRIAQLKIREQSQQKYATNAVSDEGKKDKDETWKMSKKSVDLDSEPEEA
KVGRKRKKKKEKPANQIFNEHRPWQSSSEDSEEVAEEEDDEEIEDEDDAPLGPLKSDHEF
SPESEDDDDEEWQPVKRARTARKESDSEEVDDLPCQKCMKNDHPEWILLCDKCDNGWHCS
CLRPPLLGIPEGDWFCPPCEHIILLERLQAKLVEYDKKLSKKSIEDRRKERLAYVGISLN
NVLPNKAHLEHRKKKRRHSSEGLSGSWSESESERSASESDSDEPIYQLRQRRQTKSYKFN
EYDEMIKDAIGEDTEQPEDTAGNLGRGKDIQTIVKGLEEEPEPAPKDESVVKNEEENRPS
AVHLKKMLRKKHRKLNSLDFDSEEEDISDEDFKGSSDDSDEEEEEELSENSEDSDDYVGR
KRRKAAPTRRSTRARTRRFEDEDFINDDTDDEAPKRKRKKSSWDESETDESDLSGYGRSS
KAKQKKKKLGQKESATKKSRPRIQYGGLTSSDEEEMGRGRRTRGKKATYVDALGSESDEE
PVSRNNPRKILSDDDDDDFVANEDDEPDEEDKDSEDKPEPEDEDDEDNSEEEELPVKPRL
IVPKIYIKKPLSNKTAAGPLENSKAAQFKPKPSNPIIAANDGAPTKGILSLESNVRDGEV
GGLDKPAAKRPRKPSIVHEPIVSNVSALIKNDIENDDLSEPPGISLPMFDELDSSHPKDL
LDDSPRKRKARGALKKKLEATGAASVKFTQPAIEIAAPPQPFLQAQPAPSVITRMLQTKP
GASVYPVGRIRPKQFATMRDDDSDESSPKHSPASSPSIGQIGGVSTVYNLAGAPQGNAPL
PYRHSGPPHPGMNHYPRGPLGMAAPAYHRGMDPSPSGGSVISFSDAPAAAPSGSAPISAP
DNLNRRPQVNQRYPPPTGAALGTPRPPLHLYRPPPPGNSGTPVGAPYVPPLGATNGPPPS
HPPYHVAGAVNGPLPPPQPYPSPPVAANVPPAVLPYPPSVPAAPNIGAQPAHSQYVPPQP
PVSDGAPPSGHPPEGYYGSYPPSTANEDALQPSSYGGLPPETGPPYQEPYGSEGAPNAPA
GPAKAFEEESGGEFAGLASYFSSQREDDLDS
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgaagctgatgcttcctgtgaagaggaccccaatttcgctgttatttgtgcg
tttttcgagaaattcgggcaactcattggtataacggatgtcgacttttgcgagctccgg
tccatgctggagaacacttatgaagtctcacaatacctgatcgacctgcacattaagctt
ctaaggaaaattaagcgaaccgcctctccgccggaaaaatgggagaaatttctcatcaaa
ttctgtcacacgttctcctcattggaagcctggcaggtggaacgattcggctacaagaaa
gcgaaactggctactaaagtgcgagttttaaaggaactgcttgaagctcagtttgatttt
aactcaaagttcaaaatcgaagtgaataaactgtcctcgaaggagttgagagcggagccg
ctgggcagggacaagtttgggcacgcttattggtttcaaagcgacgaaaactaccagatc
agggtctacaaggaggatttggatgacgagaagtggacgcttgtggctaaggatcggggt
gggttgctttcgttgatcgccactttgagcgaaggtgagactaaactaagctcggattcg
gctggcaatgaagacagcaacagtttatcggagaagccgattattgatactggccaacaa
gacactgattcgaagaaaacgtcggatgatgaagatttggctttggacaataaggagatt
gagccagcaaaagacgaatcccctgtagaggccgttgcgaaagacgaagcgcctgagtca
aaatcccccgagccagacagtgaagaaacagtgcttcgtaagtttaaaataaaaacttta
gaagtttcactctctgatataaatgccaaggaagcggttgcagagggcgcaatccaggag
ccagtgatgagaatagagggcgaaggctcaggagcggacaacgagagttttattattggg
gacattattgaagaaggcgtgatgtattttcaaggcagaggaagtggagaggattgccag
actggcaattcatcagaagagactgaaaatggaccaacaaaatccgaaactgaaactcat
gatcaggtcaaagagcttgaatcaaaagctgtagaggcgcaggaggagactttggataaa
cctgctaaagatgagctggatgccaataaagcgccagagaacaccgagcctcaaagcaac
ggcgaatccaagcaggcgacagccggcaataatagcgaggaaatcacggccagtgaagag
ccggtggctttgaagccaacggcagaccttgaagaagcaccagaggctgtaattaatgag
ccaaaatgtgaaaaaaagcaggcgtatacgtgcggcaaagaggaggaaaacggcaaacaa
acaccagtggtggaaatcgtggatgtgtccaacaacggccatctagaagagctagaggtg
gttaaagactcaggatcgccgcactcgtccaacgggaaaagtcaagagcaggatcctttg
gcagatgatcagccagtggcgggcaatgattctgagagtcttcaaactgccaatgagcct
aaagctctgaaaggagcaagcgccgagtcttcaatcaccaactctcctagtgagactgtt
gaagaaaacagccccatttcaatggtcgaactcacgcctggtgaaagctgcgatggaccg
cgcgagactactttaaacgccccacctagtgaagaacctgaagctgctaagctggttccc
gagaaaaacatcttgtcgttttccttggacttcaaagactctccctcgccgcctgccgat
tcagttcaaaagccctcacctatgagggctgtgcgcaagcgaggtttggaagcatcagct
accaaggctcaggagtctgacgacaatcctgggaagcgaatgaagctgaaagggcgccgc
caagttgacgcagctctgcggaagagcgtagagcaacgcatagagcagctgcatggcagc
agcagcgacagcaaggagagcgaagaagaatcacaggaaccgaaaaaagctggccgcttt
gccaaaaaaaagccaagcaaagctgaagagtcggacgactccagctcgaagaagtctgcg
aagaaggcggggaagaaacatagcagaatgttgctcggcctgcaaattggcgatgattca
ttcagtgaggagcggcctcaattgagacagtcgcgtcgcattgcccagctgaagatcagg
gaacagtcccagcaaaagtacgcgaccaacgctgtgtcggatgaaggcaaaaaagacaag
gatgagacgtggaaaatgagcaaaaaatccgtggacctcgactcggaacctgaggaagcc
aaggtggggcgaaagcgcaagaagaaaaaggaaaaacctgccaatcaaatatttaacgaa
catcgcccgtggcagtcgagtagtgaagacagcgaagaagtagctgaggaagaggatgat
gaggaaatagaggacgaagacgacgctcctctgggccccttgaagtccgaccacgaattc
tcgcccgagagcgaggacgatgacgacgaagaatggcagccagtgaagcgagccagaact
gcaagaaaagagtcggatagtgaggaggtcgacgatttgccgtgccaaaagtgtatgaaa
aacgaccatcctgaatggatcttgctgtgcgacaaatgtgataacgggtggcattgttcc
tgtttgcgcccaccgcttctgggtattccagaaggagactggttttgcccgccctgcgaa
cacattatcctgttggagcgtctgcaggccaaactggtcgaatacgacaagaagctgagc
aaaaaatccatcgaagaccggcggaaagagcgtctggcttatgtgggcatcagtctgaat
aatgtactgcccaataaggcacatttggagcatcggaagaaaaagcgccggcattcatcg
gaaggtctttcgggcagctggagcgaatcggagtcggaacgatcggcgtccgaaagcgac
agcgacgagccgatttatcagctgaggcagcgcaggcaaacgaaaagctacaaattcaac
gaatacgatgaaatgatcaaggacgcgataggagaggacactgaacagccggaagatacg
gcaggcaacttggggcgagggaaggacattcaaaccatcgtcaaaggattggaagaagag
ccggaacccgcacctaaagatgaaagcgtggtgaagaacgaagaggaaaaccggccatcg
gctgtgcatttgaagaaaatgctgaggaagaaacatcgcaagctgaatagcctggacttt
gatagcgaagaggaagatatatccgatgaggacttcaagggatcgagcgatgactcggat
gaggaagaggaggaagaactgtcggaaaacagcgaagatagtgacgattatgtgggcagg
aagcggcggaaagccgccccaactaggcgttcgactagggcgagaactagaaggtttgaa
gatgaggattttatcaacgatgacactgacgatgaagcgccaaagcggaaacgaaagaaa
tccagttgggacgaatcggagacggatgaatccgatctctcgggctatggacggtcatcc
aaagcgaagcagaagaaaaagaaactgggccaaaaggagtcagcgacgaaaaaatcgcgt
ccccgaatacagtatggcggactaacgtcgagcgatgaagaagaaatggggcgagggcgc
cgaaccaggggaaaaaaagccacttacgttgacgctttggggtcggaaagcgatgaagaa
cccgtatcgagaaacaatcccagaaaaatcttgagcgatgatgatgatgacgactttgtg
gccaatgaagatgatgagccagacgaagaggacaaggacagcgaagacaaaccagaacct
gaagatgaagatgacgaagacaactccgaggaggaggaactgccagtaaaaccgcgactg
attgtgccgaagatttacattaaaaaaccactgagcaacaaaaccgctgctggccctttg
gagaactccaaagccgctcaattcaagccgaaaccctcaaaccctataatagcagctaac
gatggggcgccaactaaagggattttgagcttggaaagcaacgtgagagatggggaagtc
ggaggattggacaagccagcagccaaaaggccgagaaaaccgagtattgtccacgagccg
attgtcagcaacgtatcggcgctgattaaaaatgatattgagaacgatgatctttcggag
ccgccaggcatttcgctgccaatgtttgacgagctggattccagccatcccaaagacctt
ttggacgactcgccgcggaagcggaaagcacgaggggctctaaagaagaagctggaggcg
actggggctgcgtcagtcaagttcacgcaacccgcaatcgaaattgcggcgccacctcag
cccttcttgcaagcccagccggccccttcagttatcaccaggatgttgcagacaaaaccg
ggtgcttcggtttatccagttgggcggatccgtcccaaacagtttgcaactatgcgagat
gatgattcggacgaatccagtcccaaacactcaccagcttcgtcaccgtccatcgggcag
attggcggagtttccacagtgtacaacttggcaggggctccacaaggcaatgccccgctg
ccatatcgccattctgggcctccgcatccaggaatgaaccattatccccgaggtcctctg
ggaatggccgctccggcgtatcatcgggggatggatccctccccatctgggggctctgtt
atcagcttctctgatgctccagcagcagcacccagtggctccgccccaatcagcgcgccg
gataacctcaataggcgcccccaagtcaatcaaagatacccgccccctacaggggcggct
ttaggcaccccccgtccgcctctgcatttgtaccggccgccgcccccgggcaatagtgga
acccctgtgggggccccctacgtgccgcccttgggggccaccaatgggccgcctccttcg
caccctccatatcatgtggcgggggcagtaaatgggccgctgccgcccccccagccgtat
ccgtcgccaccggtcgccgccaatgtaccacccgcagtactcccctacccgccttccgtt
ccagctgcccccaacattggggcgcagcccgcccactcgcaatatgtgccgccgcagccg
cctgtttcggacggtgcgcccccatcaggccacccacctgaggggtattatggcagttat
ccaccttctacggccaatgaagacgccttgcaaccgtcttcgtatggaggattgccgcca
gaaacaggtcctccatatcaggagccgtatggaagtgaaggagccccgaatgcgccggcc
ggccctgcaaaagcgttcgaagaagagtccggaggcgagtttgctggcttggcatcgtat
ttttctagccaaagagaggacgacttggactcatag
DBGET
integrated database retrieval system
