Dendroctonus ponderosae (mountain pine beetle): 109538622
Help
Entry
109538622 CDS
T04899
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109538622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109538622
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109538622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Ig-like_CATSPERD
Motif
Other DBs
NCBI-GeneID:
109538622
NCBI-ProteinID:
XP_019761500
UniProt:
A0AAR5PKD9
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MEESEKQTAEDLDNDDQWLYGDGEPDGADDSEGKDEADEAPAEKSPEPAEEPPEPAEAAP
TEPTVPIEPSPINYPDDQFDDDGPPGVDAPDENDNEEIENEREDGELKQNGDDDEDLDDD
SDDGVNVVIGNIKTTTSYPAQQQQQQQQQQQQQQQHSIKRGGISTAIVDKSKQIPQPGKF
QIEEFEQIGTINGMSSCDYNLDSLEDKPWRKPGSDITDYFNYGFNEDTWKAYCERQKRIR
INESGVGIIPLNSIGLPRGSMDNKYGNQNFIQPLSRSMGTPMLKMGDSPKINTIQVLTAD
RREYSRKPGFPDVTLPPPINYPDPFIGQADFGFNPEPEPFYGGGYEPTQDSQWMEGQPNP
NWQPVDIKTLGGGSPPRGAHMMGPPSRRSPGRRSLSRERDRDRERSKSLRPRDTEREKSR
RRERSKSRSRRHKSRSRSPSHRPHKKKKSRRHEDSD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatccgaaaaacaaacggctgaagacttagacaatgatgaccagtggctctac
ggggatggagagcctgatggtgccgacgactccgagggaaaggatgaggcagatgaagct
cccgccgaaaagagtcctgagccagctgaagagccacccgaacccgctgaagcggctcca
acggagccaaccgtccccatagaaccttctccaataaactatccagacgatcaatttgac
gacgatggacctcctggggtggatgcaccagatgagaatgataacgaggagattgaaaat
gaaagagaagatggagaattgaagcaaaacggtgacgatgatgaggatctggatgacgac
agtgatgacggcgttaatgtggtcattggaaatatcaaaaccaccacttcatatccagct
caacagcaacagcagcagcagcagcaacaacaacaacagcaacagcatagtattaagcga
ggcggcatttcgacagcaatcgtcgataaaagcaagcaaatcccacagcccggtaagttc
caaattgaagaatttgagcaaattgggaccatcaatgggatgtcgtcgtgcgactacaat
ttggatagtctagaagataaaccctggagaaaacccggctcggatattaccgattatttc
aactatggctttaacgaggacacctggaaagcttactgtgaaaggcaaaagcgaattcgt
attaacgagtctggagtcggcattatacccttgaattccattggcctgccaaggggttca
atggataataagtatgggaatcagaacttcatacagcccttatctagatcaatgggaaca
cccatgctgaaaatgggcgactctccaaagataaacactattcaggtgttaactgccgat
agaagggaatacagccggaaaccaggttttccagatgtaactttgccgcctcccattaat
tatcccgatccgttcattgggcaagcggactttggcttcaaccccgaacccgagccattt
tacggcggcgggtatgaacccacgcaggattcacaatggatggagggacaaccgaatccc
aattggcaaccggtggatataaaaacattaggaggcggaagcccgcccaggggggcccac
atgatgggccctccttccagacgatccccagggcgacgaagtctttcgagggagcgcgac
cgcgaccgtgaaaggagcaaatcgctacgtccaagggacacagagagggaaaaatccagg
aggagagagagatccaaaagcagatcccgacggcacaaatccagatctagaagccccagc
caccggccgcacaagaagaagaagtctaggcgacatgaagacagcgattga
DBGET
integrated database retrieval system
