Dendroctonus ponderosae (mountain pine beetle): 109538839
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Entry
109538839 CDS
T04899
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109538839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109538839
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
109538839
Prokaryotic type
Archaeal type
TFE
109538839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
109538839
NCBI-ProteinID:
XP_019761801
UniProt:
N6UBP6
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MSEERLVTEVPSSLKQLARLVVRGFYTIEDALIVDMLVRNPCMKEDDICELLKFERKMLR
ARIAILKNDKFLQVRLRMETGADGKAQKINYYFINYKSFVNVVKYKLDLMRKRLETEERD
ATSRASFKCLACLKTFTDLEADQLFDFMSGEFRCTYCREVVEEDSSALPKKDSRLLLAKF
NEQLDPLYILLRQVEGIKLAPEVLEPEPVDISTIRGLDKKSAMQSGQEWSGEATRSAGFA
VEETRVDITIGDDSSATATTAHKEAPIWMTESTVITSAAPDDSKNGADQKETLTSPSTKN
DDIMSVLLAHEKRPTNQTSSAVKGLGTNDSDSDSDDSNEEKVGLEDVETMESEDEDDSTV
PQVNVGNKTYLITAINDGIISEMTQAEKEIYVQVFQDYYSHMNY
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggagcgtctggttaccgaggtgcccagtagcctaaagcaactagcccgattg
gtggttcgcggtttttacacaatcgaagacgccctcattgtcgacatgctggtgcgaaac
ccgtgcatgaaagaggacgatatttgcgaactgctgaagttcgagcgaaaaatgttgcgt
gcccgcatcgccatcctgaagaacgacaaattccttcaggtgcgactgaggatggagacg
ggcgctgacggcaaggcccagaagatcaactactacttcatcaactacaagagtttcgtc
aacgtggtgaagtacaagctggatctgatgagaaaacgcctggaaacggaagaacgcgac
gccactagtcgagccagcttcaaatgtttagcttgcctgaaaacgttcaccgacctcgaa
gctgaccagctattcgacttcatgtcgggcgagttcaggtgcacatactgccgtgaggtg
gtcgaagaagactcgtccgccttgccgaaaaaggactcacgcctgttactagcgaaattc
aacgagcagctggacccactctacattttgctcaggcaagtggagggcatcaagctggcc
ccagaagtgctcgagcccgaaccagtggacatcagcaccatccggggcttggacaaaaag
agcgcaatgcagtccggccaggaatggtcaggcgaagcgaccagaagcgccggattcgcc
gtggaggaaacccgagtggacatcaccattggggacgactccagcgcaacagccaccact
gcgcacaaagaggccccgatctggatgaccgagtccacagtcattaccagtgcggctcca
gacgactcaaagaacggcgcggatcagaaggagacgctcaccagtccgagcacaaagaac
gacgacattatgagcgtgttgctggcgcatgagaagcgaccaaccaaccaaacatccagc
gcagttaaaggtttggggaccaacgactcagattcggactcagacgactccaacgaggaa
aaggtcggcttggaggacgtcgaaacaatggagagcgaggatgaagacgacagcactgta
ccccaagtcaatgtgggcaataagacctacttgattaccgcaattaatgacggcataatc
agcgaaatgactcaggcagagaaggaaatttatgtgcaagtgttccaggattattactct
cacatgaactactga
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