Dendroctonus ponderosae (mountain pine beetle): 109538955
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Entry
109538955 CDS
T04899
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109538955
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
109538955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
LTN1_E3_ligase_5th
Motif
Other DBs
NCBI-GeneID:
109538955
NCBI-ProteinID:
XP_019761965
UniProt:
A0AAR5PLQ8
LinkDB
All DBs
Position
Unknown
AA seq
2164 aa
AA seq
DB search
MTHPSFQTNGASLEDCHTNFFALTELSGIKWRKLTWSEPGGGSHGPGHGIHHVVPGEPLD
DPVLRSYSRCLAADILCVWRRVSGCSGSARPPPDAFEPPPPPAQPPPLSLASAKELWIFW
YGEEPDLNELVAPELNMTDCEQGSWESGLSYECRSLLFKALHNLIERSLLSRDFVRLGKW
FVQPYDYPAPRFDPSDPDNPNGIGPEAYATPPHNASHLSFAFAFFVHGESSVCASIDVRQ
HPAVRRLTRWHMQEAQASTGGINVILAPHGLAGTLTGQSFRPPETTAKFIDDWGHFYPLD
KSSSLTDSSVVEVIVKGSKMRYPSCYVLVTDLDDYTNPMFSSFGCCHVNLTRANESIPKS
NCINPNESIPITVVTPPPSPIQINSRVPQPGAHTVSVENINSMSRDQTAAQILAEQTWQQ
CLYSGAFLDKASKEDGCWDYVEPTRKTICTCLKPRKYVSSSSSKWLQSSSSLGSSLQLGT
SPRPQKLSKNRVPFHRRSPTPKPEPRPSQTSPIRGTSQPPQTTDSRSCLGGSYTPQGGPP
SYPRTQESMIVNSVGSPASVAPSPLQGPHSQPASVPPADATMPTLSPNPPISDQSPSLAR
DKSHTPPDSVRLPPKSVDSPVISPVEGKCDSENKMGEQRATDDGDKSNSLLNLKRPLLFT
KEYEVALGEEEHTLDMLYDYSTQEAWLNLPVKRFKPDSKDSRFGKRVDLYTLYHHNGISQ
CSDINNMNNTIKMEIKQEPGTMSEMDSSRSMQQSHGIKRPGDPYEFEEDGSNPNCKIDGF
IRTPPIKEEPKDKKDILFTSEGLQPSYKDLEQIFDNSDYTSSDEACFPQIQIQTPPGSAG
PTTNHHLLHHDDTIPTKRLSGHGQTNLGGCPNVGMPPELSKMFPTPPSLEHNPIASPCGQ
LDLGQQDYPDITIVRVKQENIYPMMGSPQEENIDDWSYVFKPSLCCKMVGSSKYAPLNNL
PSQVQPLSVPGNCTYKPSWVQHMENNKQHQQNSNNNNTTSSNNNNNTSNNLNSRNRTPTP
SMANNIHPNAGIFPPSPLHPPGFRPPPPPYELPSPANSTTSSYLNKNINSVEPVPTPQPN
HRTPEASSLVLNILLTDTAFNIFRDHNFDSCTLCVCNASPKVVGNIRGADSGIYLLNSHS
DKLHASAQPTSPYPGLGQPPPYGSMMSPQHHGASEEDQIRCSCGFSAVVNRRLAYGSGLF
YEDEMEITGIAEDPGERKKSSLASLLTSLNCLKSDATIDRDQLESIPHNVVNLICDQLVF
IPSTANALCRAARYVKHSKGAVYSNPLHYLEYSDSNEVTSIALEQSKNLLENLGMCKMEN
DKHSKLNNSFGVHKWPYLRAPGPQCNQDIVRVMKSLQPLLQDAIQKKCQTRLWEAPSAVK
GPLTWRQFHRLAGRGTDDRCEPQPIPSVIVGHDKDWLCLSPYALQQWESLMLEPYSYSRD
VAYVVVAPDNEAILPRVKTFFKELSASYEICKLGRHSPITKVLRDGILRVGKTAKMKIGN
EPVEEWFNLLGDGEASEMLKLYAQVCKHHLAPHLQQVPMDKTLLDPPSDNISERPAPSPM
PPPSTPDPNNSSQSFSSQDKAPSTPKSDQDGDGLKDIPSFGNSISDMLHDDDEREAPSVI
VYLVEPFSLSSTHPDMQRLAVLALLRCFQSVLAAVPENIRSNIGVQIISLESIVELNKSR
ERMRHSDHMRALALNIFSQCRRLLMHSNNVKSLTGFGTAATADLFLKSKDEKNRAPYRLF
TPPYVLAPMREKVEASEAFGKGSQDQSSVLYISYCLSEDQSWLLAVGTDERGEIFENVTI
NIDIPNRSRRKKASARRVALEKLMTFILGIMSQSVRPWRLVVSRLGRIGHGELKGWSWLL
SKPNLVKASRHLKEICNQCSMLYPSAVPCIISACLVSIEPDSCLRLMPDQFTPDERFSQA
SVNSQLSTPQDVSCTHILVFPTSATTQSSQTAFQEQHISGDLGDDELFKAFGDDMAVEVD
NDISEIFNGWDQIGYQSPNGSPRREDAGVGSPSGGVAGGMEGNLGAPGGAPKGQESNEEV
GVVLQQPLALGYLVSTAPTGRMPRWFWTSCPHLEGVCPVFLKNALHLHSPNIQQNSDDLF
QQAAQVSSHPLDSQYTTDVLRYVLEGYNALSWLSFDSNTKDRLSCLPVHMQVLVQLYHTA
AALL
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaccccagttttcaaactaacggagctagtttagaagattgccacacaaatttc
tttgctttgactgagctctctggaataaaatggcgtaaactgacctggtcggaaccggga
ggcggcagtcacggtccaggtcatgggattcatcatgttgttcctggagaacctctggac
gatcccgttttacgtagctactcgcgatgtttggcggcagatattttgtgcgtgtggcga
cgcgtttcgggttgttctggatcagcacggccgccccctgacgcctttgagccgcctcct
ccgccggcacaaccgccgcccttgagcctggctagtgctaaagagctgtggattttttgg
tacggcgaggaaccggatttaaatgaattggtggcaccagagttgaatatgactgattgt
gaacagggctcctgggaaagtggcctatcctatgaatgtagatctctactgttcaaggca
ttacataatttaattgaacgaagtttattgtcaagggactttgttcgcttgggcaaatgg
tttgtacaaccatacgactacccggctcctcgtttcgatccttccgatccggacaatccg
aatgggatcggtccagaagcatatgccactccgccccataatgccagtcatctgtctttt
gcatttgcattctttgtgcatggagaaagttcagtatgcgcaagtatagatgtgaggcag
catcctgccgtgcgcaggttaactaggtggcatatgcaagaagcgcaagccagtactgga
ggaatcaatgttattttggcccctcacggacttgcaggaacattgacgggacaaagtttc
aggccaccagagacaaccgcaaaatttatagacgactggggtcatttttatccacttgac
aagagttcatcgcttaccgatagtagcgtggtggaagtgattgttaagggttcaaaaatg
agatatccatcgtgctatgtcttggtgaccgacttggacgattatacaaatccgatgttt
agttccttcggttgctgtcatgttaacttaactagagcgaatgaaagcatacccaagtcg
aactgcattaacccaaacgaatccatccccattactgtggtgacgccaccaccatctcca
attcaaataaacagtcgagtaccacaacctggagcgcataccgtttcagtagaaaatatt
aatagtatgtcaagggatcaaaccgccgctcaaattcttgctgaacaaacgtggcagcag
tgcctttacagtggtgcttttctcgataaagctagcaaggaagatggttgctgggattat
gtagagccaacacggaaaacgatctgtacctgtttaaagcctaggaaatatgtctcttca
tcgagctcaaaatggctgcagtcctcgtctagcttgggctccagtctccagttgggtaca
tcaccgagaccacaaaaactatcaaaaaatcgtgttccttttcacaggagatcgcccact
cctaagccggagcccaggccatctcagacatccccaatcagggggacgtctcaaccaccg
caaaccacagactcaagatcatgcctaggtgggtcatatacgccgcaaggaggacctcca
tcctatcctcgaactcaagaaagcatgattgtgaattctgtaggaagtcctgcttcagtt
gctccatcaccgttacaaggtcctcattcacagccagcatcggtgccaccagcggatgcc
actatgccaactctttcacctaatcctcccatatcagatcaatcaccatctttggctcga
gacaagtcacatactcctcctgatagtgtgcgattgccacctaaaagtgtggacagtcca
gttattagccctgttgaaggaaaatgtgactcggagaacaaaatgggagagcaaagagca
accgatgacggtgataagagcaacagtttgttaaacttaaagcgacctttgctttttact
aaagagtatgaagtagcgcttggtgaagaggaacatacattagatatgctatatgactat
tcaacccaggaggcatggttgaatcttccagtgaaacgattcaagcctgatagcaaagac
agcagatttggaaaaagagttgatctatacacgttgtaccatcataatggaattagtcaa
tgtagcgatataaataacatgaataataccattaagatggaaattaagcaagaaccagga
acgatgtccgaaatggattcatcgagatctatgcaacaatcgcacggaattaagcgtccg
ggtgatccctacgagtttgaagaagatggaagtaatcccaactgtaaaattgacggcttt
attcgaactccccctatcaaagaagaacccaaagacaagaaagatattttgtttacgagt
gagggattgcaaccttcctacaaagatttggagcagatctttgataattctgattatacc
agtagcgacgaggcctgctttccgcagatacaaattcagacgcctcccggctcagcgggt
cccacaaccaaccaccatctgctgcatcatgatgataccattccgactaaacgcctctca
ggtcatggtcagaccaacttaggaggttgtcctaatgttggtatgccccctgagcttagt
aaaatgtttccaactccacccagtttggaacacaatccaattgcttccccgtgtggccaa
ctggacttgggccagcaagattatcctgatataacaatagtgagagtaaaacaagaaaat
atttatcctatgatgggtagtcctcaagaggagaatatagatgattggagttatgttttt
aaaccttcattgtgctgtaagatggtcggaagtagtaaatacgcacctttgaataatctt
cccagtcaagtacaaccactttctgttcccggcaattgtacatacaaaccttcatgggta
caacatatggaaaataacaaacagcaccaacaaaactcgaacaataataacacaactagt
agtaataacaacaataatacttcgaataatctcaatagcaggaatcgaacacctacgcct
tcaatggccaataatattcatccaaatgctggaatatttccacctagtccattacaccca
cctggtttcagaccacctccaccaccttatgagttgccgtcgccagctaattcaaccaca
tcttcctatctcaataagaatattaattctgtggaacccgtaccgacacctcaaccaaac
caccgtacaccagaggccagttcattggtacttaatattcttctgacagacaccgctttc
aatatcttcagggatcacaatttcgatagttgtacgctctgcgtttgtaatgcaagtcct
aaggtcgttggaaatattcgtggagcagattcgggcatttatctgctcaattcacatagt
gataagctccatgcaagtgcacaacccactagtccgtatccaggtttagggcaaccgcct
ccctatggaagtatgatgtctcctcaacatcacggcgcttcagaggaagaccagatccga
tgtagttgtggtttttcagctgttgttaatcggcgacttgcttacggaagcggtttgttt
tacgaagatgaaatggaaataacaggaatagcagaagaccccggcgaacggaagaagtcc
tcgttggcgtctctgctaacttcgctgaactgcttgaaatcggatgcaacaatagatcgt
gaccaattggaatctataccacataacgttgtcaatttaatctgtgaccaactggtgttc
ataccaagtacggcgaatgctttgtgtcgagctgcgcgctatgttaaacattcgaaagga
gcagtgtactctaatcctcttcattatttggaatactcggacagtaacgaggttaccagc
atagcactggaacagagtaaaaacttgctagaaaatctgggcatgtgcaagatggagaac
gataaacattcaaaattgaacaactccttcggagtacataagtggccttatctgagagca
ccagggcctcagtgcaatcaagacattgtaagggtaatgaaatcgctccagcccttgttg
caagatgctattcaaaagaaatgccaaacaagattgtgggaagcaccttcggccgttaaa
ggtccattgacatggcgacaatttcatagattagctggaagaggtacggatgaccgttgt
gaacctcaaccaattccctcagtgatagtagggcatgacaaagattggctgtgtttatct
ccttatgctctgcaacagtgggaaagcttaatgttggagccatattcttactcccgggat
gtggcttacgtagtcgtggcccctgataacgaagctattttgcctcgagtaaagactttc
tttaaggaattatcagcgtcatacgaaatctgcaagcttggcaggcatagtcccattact
aaagtacttagggacggcattttaagagtcggtaaaacagcaaaaatgaaaattggcaat
gaaccagttgaagaatggttcaatttgcttggggatggtgaagccagcgaaatgcttaaa
ttgtatgcccaagtatgcaaacatcatctggctccacacctgcaacaagttcctatggat
aaaactctactagatccgcctagtgacaatatttcggaacggccagcgcctagtccgatg
cctccaccaagcactccggatccgaataatagttcacagtcattctcgtctcaggataag
gcaccatctacacctaaaagcgaccaagatggtgatggtttaaaagacatacccagcttc
ggtaacagtatatccgatatgttacatgatgatgacgagcgtgaagctccctcagttata
gtttatctagtggaacctttttctttgagctctacccatccagatatgcagcgtcttgca
gttctggcacttctcagatgttttcaaagcgttcttgctgcagtacctgaaaatattagg
agtaatatcggtgtacagataatttcattagagagcatagtggaattaaataaatctagg
gaaaggatgcgacatagcgatcatatgagagcattagcgttaaacatcttctcgcaatgc
cgccgactactgatgcattccaataatgttaagtctcttactggatttggtactgctgcc
acagcagacttatttttgaagagtaaagacgagaaaaatcgggctccatacagacttttt
actcccccatatgtgctggctcccatgagggaaaaagtcgaggcttcagaggcatttgga
aaaggctctcaagatcagtcctcagtattgtatatttcctattgtctgtcagaggatcaa
agctggttattggccgttggcaccgatgagcggggagaaattttcgagaatgttaccatt
aatattgatattcctaaccgaagtagacggaaaaaagcgtctgcccgacgggtggctctt
gaaaagttaatgacatttattctgggcattatgtcccagagtgtgagaccatggcgattg
gttgttagcagattagggagaattggacatggggaattgaaaggttggagttggctgttg
agcaaaccaaatctcgttaaagcatctagacatttaaaagaaatctgcaatcaatgttcg
atgctatatcccagcgcggtgccttgcataatatcggcttgtcttgtcagcatcgaacct
gattcttgcttaagattaatgcctgatcaatttacacctgatgaacggtttagtcaagct
agcgttaattcgcaattgtcgacgccgcaagatgtatcctgtacacatattttagtgttt
cctaccagcgctactacacagtcttcacagactgctttccaggagcaacatatttcgggc
gacttgggcgatgacgagctatttaaagcattcggcgatgatatggcagttgaagtcgat
aacgatatcagtgagatttttaatggctgggaccaaataggttaccagtcacccaacggc
agtcccagaagagaagatgctggtgtcggaagtcctagtggaggagtggctggtggaatg
gaaggaaacttgggggcacccggaggagcaccaaaaggtcaagaatcaaatgaggaggtt
ggcgttgttttacaacaaccacttgctcttgggtatctggtctcaaccgctcctacagga
cggatgcctcgatggttctggacttcttgtcctcatttagagggcgtttgtccagtcttc
ttaaaaaatgctcttcatctacacagccccaatatacaacagaacagcgatgacctgttt
caacaagcggcacaagtaagcagccatccactggactcccagtatacaacagatgttctt
cggtatgtgctcgagggctataatgctctttcatggctgtccttcgactccaacacaaaa
gatcgtctctcttgtttgcccgttcatatgcaggtcctagttcaactgtatcacacagct
gcggctcttttgtag
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integrated database retrieval system
