Dendroctonus ponderosae (mountain pine beetle): 109539008
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Entry
109539008 CDS
T04899
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109539008
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
109539008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
CENP-F_leu_zip
Talin_middle
Sp-CxC
DUF1664
AAA_27
YomF_M
AAA
DUF948
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
109539008
NCBI-ProteinID:
XP_019762076
UniProt:
A0AAR5PMR7
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MFNPGSIRKIQVKNFVTYSYMEMFPGPNLNMIIGPNGTGKSTIVAAIILGLGGQPKTVGR
GTKISEYVKHNCNTAEINIQLQGSTENSFIKVTRQFDIHDKSQWKLDGNVCSFGNIQDCI
KYFNIQVDNLCQFLPQDRVADFAKLNKKELLRETQIALCRDDLLEKQQSLIEARAKHRSL
LEQLNKHTQNLQESHDANCRLEGKVKNFNEMKKYKEMIADIDRQIAWIEYEDKRDKLTEI
KKDKQSAQAIYDKYRQEMKPLEKEIHAHRASLNDFQQKNSKITQNIRNKEGLINTTIEKM
EALMSKVRHFEDEMNTKLAECEQWDKQIQEATVKLEDSKKVYRTLLKKVNQDEHESQEIF
KHITRCTDRKRQLQDQRDLIEQDRLAKKASIKALQYEQSKIENVKQIRFEQLRKLNKDAY
SAVLWLRENKDKFKGEIFEPIMLELNVLDKSKSKYVESLVPFRDRLAFTCTDKYDMNLFI
GYIRKQQGLSVNVLHSGPASTDYKKPKIPIEHLRKFGFGAYVNFLFTAPEPIMRYLCQTY
KLHNIPIGDSSTNDCYGSVPDQLPVFFSDRSRFSINYSKYSREKSTRQDLIRGDGGLSLS
LDSIALENIKGLYEKTKRELEYLESQLSNYDIQIEKNDDELKLHKDAIKEIRTQTQQADT
LKNKIAAGEERLKQMSESKKEPEAIRNEARHKMKKLIQTMGVLQDSINSCFKELALSMTQ
NAINSVNVEVSRQKVEYFDNQIVDLRRLMEEAGETLNLVVDRYNAAMQAAKAQLQKAKSL
SNGFTPADDGFDKFRQRAKSLGDNIEQLSAEKENINSRIACLNTADDTEIKEYEDRKNRI
EKLGQNIDTINSDINKVSSKMERLHEAWLTPLNDLIAEINLKFGSAFERMGCAGEVGICQ
GDDEKNYEDYGISIKVTYRNGELLQELNAVVQSGGERAVATAAFMLALQELTPVPFRCVD
EINQGMDANNERRIFELIVETTGQQNSAQYFLITPKLVPNLTYSRQLVVQIVHNGLFIEP
DRKWSYSKLCNSQGVHI
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatccggggtctatacggaaaatccaagtgaaaaactttgtaacctatagttat
atggaaatgtttccagggcctaatttgaacatgattataggccccaatggaacaggaaaa
tctacgatcgttgctgctattattctaggcctagggggccagcccaaaacagtgggtaga
ggtactaagatatcagaatatgtaaaacacaattgtaacacggcagagattaacatccaa
ctacaaggatcgacagaaaattcctttattaaagttaccagacaattcgacattcatgat
aaatctcaatggaaattagatggaaacgtttgctcatttggcaatattcaagattgtatt
aaatattttaatatacaggttgataatttatgccaatttttgcctcaagaccgcgtcgcg
gattttgccaaactaaacaagaaggagttattaagagaaacccagattgctttatgtaga
gatgatttgttggaaaagcaacaatctttaattgaagccagagcaaagcacagatctttg
ttagaacaacttaataaacacacgcaaaatttgcaagaatcgcacgatgccaattgcaga
ttagaaggaaaagttaaaaatttcaatgaaatgaaaaagtacaaagaaatgattgctgat
attgatcgacaaatcgcctggattgaatatgaggacaaacgtgataaacttactgaaatt
aagaaagataaacaatcggcacaagcaatatatgacaaatacagacaagaaatgaaacct
ttggaaaaagagattcatgcccatagagcatctttgaacgacttccaacaaaaaaactca
aaaataacacaaaatattcgaaataaagaaggccttatcaataccactattgagaaaatg
gaagctcttatgtcgaaagtaaggcattttgaggatgaaatgaatacgaaattagcagag
tgcgaacaatgggacaaacaaattcaggaagcaaccgtcaaattagaagacagcaaaaaa
gtgtatagaacccttttaaagaaagtgaaccaagacgaacatgagtcgcaagagattttc
aaacatattacaagatgcactgatcggaaaaggcagttgcaagaccaaagagatttgatt
gaacaagaccgcctagcaaagaaagcaagcattaaagcattgcaatacgagcaaagcaaa
attgaaaacgttaaacaaattagatttgagcaattaaggaaattaaacaaagatgcctac
tcggcagttttatggctacgagaaaataaagataagtttaaaggtgaaatttttgagcca
ataatgcttgaactaaacgtgctggataagtccaagtcaaaatatgtagaatccttggtg
cctttcagagatcgattagcgtttacgtgcacggataaatatgacatgaacttgttcatt
ggttacatcaggaaacagcaaggtttgtcagtaaacgttctacattcaggacctgcctct
acagactacaagaaaccaaagattccaattgagcatctcagaaaattcggatttggtgct
tatgttaatttcttgtttactgctcctgaaccgattatgagatatttgtgccaaacatat
aagttgcataacattcctatcggagatagcagcacaaatgactgttatggaagcgtgcca
gatcaattgccggtattttttagtgaccgttccagattttccataaactattccaagtat
tcccgcgaaaaaagcactaggcaagatcttattagaggtgacggagggttatctttatcc
ctagatagcattgctttagaaaatataaaaggtctttatgagaaaactaaaagagaactg
gagtacttggaaagtcagttaagcaattacgacattcaaattgaaaaaaatgacgacgaa
ttaaaattgcacaaggatgcaataaaggagattcgaacccaaactcaacaggctgatact
ttaaaaaataaaatcgctgctggggaagagcgtttaaagcaaatgagcgaaagcaaaaag
gaaccagaagcaataagaaatgaggcgagacataaaatgaaaaaattaattcagaccatg
ggagttttacaagatagtattaatagctgctttaaagaattggcactctcaatgacccaa
aatgccatcaactctgtaaatgttgaagtgtccaggcaaaaggttgaatatttcgacaat
caaatcgttgatttaagaaggctgatggaagaagcaggagaaactcttaatttagtagta
gataggtataatgctgctatgcaagcagccaaagctcaactgcaaaaagccaaaagcttg
tctaatggatttactcctgctgatgacggatttgacaaattccgccaaagggctaaatca
ctaggagataatattgaacaactaagcgccgagaaggaaaatatcaattctagaatcgct
tgtctcaatacagcagacgataccgaaattaaagaatatgaagatcggaaaaaccggata
gagaaacttggacagaatatcgatactataaattcagatatcaacaaagttagctcaaaa
atggaacgactgcatgaggcatggttaactccattgaatgatttaatagctgaaatcaat
ctgaagttcggtagtgcattcgaaaggatgggttgtgcaggcgaagtgggaatatgtcaa
ggtgatgatgaaaaaaactatgaggattatggaatttccattaaggtaacttatagaaat
ggggaactacttcaagaattaaatgctgtagttcaaagtgggggagaacgagcggttgca
acggctgcatttatgttagcgttgcaggaactaacaccggtgccctttcgatgtgtggat
gaaatcaatcaaggtatggatgcaaacaatgaaaggcgcattttcgaactaatagtggag
actactggccagcaaaattcagcacagtatttccttatcaccccaaaattagtccctaat
ctaacatattcacgtcaattagtagtccaaatcgtgcacaatggtttgtttattgaaccc
gacaggaaatggtcttactcaaaattatgcaattcccaaggtgttcatatttag
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