KEGG   Dendroctonus ponderosae (mountain pine beetle): 109539272
Entry
109539272         CDS       T04899                                 
Name
(RefSeq) intermembrane lipid transfer protein VPS13C
  KO
K19525  vacuolar protein sorting-associated protein 13A/C
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dpa04131]
    109539272
Membrane trafficking [BR:dpa04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    109539272
SSDB
Motif
Pfam: VPS13_N VPS13_VAB VPS13_M VPS13_C
Other DBs
NCBI-GeneID: 109539272
NCBI-ProteinID: XP_019762480
UniProt: A0AAR5PN78
LinkDB
Position
Unknown
AA seq 3299 aa
MLEGTVARILNQLLGKYVQDLDTENLNVGIFSGTVQLNDLKLKPEALYELALPVEVKAGT
IGKIGLKIPWSALWRHPVVLSIEDIHMVVNPIVRNQPFDPDLNKRLLRAFKRRTLELLEY
DGGLLGGPAAFAEHLVSHILNYIQINIINVHVRYEDDSSWIEPIAAGLCIASISAQSTSS
KWKRANNDPHLQTGYYLIKIEAMSVYWNTKVTPKRWDLPSQYYQWRNAMVKSLQSFSFEG
EVFNFVLNPMLTKIKMTINKSLEGHVAEISTDVIVQDCNLQLSKNQYDAIIAVSSSLQRM
MISWQFLSARPVAKVLKNEKAWWKYACWATLEQRVRPMSWSRIKTAREHYKKYMDTYKQI
IANPHDTELKLDLQQHEDNLSIVNVVIARQHTRLLMQSNSQTEKSFWSMLPSPEKIVLCQ
KIGYYDKNETARPIDHTCNLKLGNCNLILTNQSQEVLVATLTQTLLTVKPQFVDQTYRAS
LKVEGFIVEGNGPKNTLNCLLSSEHLKDSPAFVFIAYWEKLKTHNGFAHRLQVTLNPVEC
IYNKXCFEDLETFLQATASSKRTNLLQVVRKMPNLLYKRVRKMIASKWELNLNIKCPYLV
IPESSSCTAPEENVLVVDLGKFWIRTEICQQTQICETATKMELEEQLYSKLHINCTNLQV
LFCDKNDHWKEARNEKDTAMHLIPKTSFTAVYALAALNVKSIPRLKFNIACNTLKLNISE
RKTGLLLKFFNVDQIRIDVITEAMQPDIYKKDRVKELLNVPTLKRMQERISLSDTFKYRK
HKILNGFEETKKTNKSFELNEPKPNMNEAWARTVDLPGLEDNISPSNNIEVLYGLVVNEF
SMVFSKSSDSTDRQYLMLRLGQFSMDIAFMTFGPAYQVSLHSVLLTDKMHTTSSGQYLDL
IFTPLPNNSDVVTVLYRKVNAKCPEFWSHFHGVETSLVANIGTLHLLVHQEAIHTFIKYS
KYLSNKIKHQASQYLKNLVRRFIASINSTLHKPSDVPVPPGSVKFSQSARMSDLNVVVCD
SDFDIINIHLSGLELDFLFRANERFVFRSYLGSINVDHLSQVTMYSKVLYTDEDKVFEVK
YVRNAAHLKNSEVLDRQYEDAHDGSFKFQLGRIHFIFLYKLMVQLQRFIINLEVLEYLES
YLQLTRKAVRVATDTLKNKTKISLSINVFGPVFLLPQKSSSPNVLVVDTGNLRIENFFKE
SETGVVEDILAKLKEVVVTRGVMSLTSTLEMQETLVEPICINMDIKKYTNAKTLQKNWEI
GAILEKIELTLGQKDLAMLMAIYSDNIGEAKLVDLLPEEIRSPISDTLDQDDNVRELEAF
FSEPKQKFVTGKCRIEEVKLVLFFDAGELLSSPIRDLNHGLCKLEINDIDTSVVVYTDKS
SDGKLSIDTILVEEIGPDANKHSKTVLSSPAEDGRNNNICNITVNKPPIVDVNFHQTKNG
DQSADVIVGRLCLSLSVPFCEKVALYVLECIPREINELGIVNAGYEGETRRFDEKRRLQN
SLTISVRVNKPELMFLVETTSNKKRYFITKSEILVDFSRHCNRLNLVTSLSGLHSLFYDL
SEYSDQPYVVLKQCDIELARNVEEHSEKIVLSISGMYVKLCSEVVHSVNDILNDIVEHFK
VPEMELERKWQRKCSTVEAAPEELWEPKKMPPYTTKANSANLPTHACSQSLTVPKFEVVL
IFELDQIQVLLLKSSMELQLQNWNHLVNSTGTVSLQANYFNESAQCWEPVIDPVMLEEME
YRGWECKITVFQDKPLQINDPEEKLEKVQQRKKPPPNQSRAQKASRSYTTTESEDSGEDM
AYLEPMNSLNLNINRRVKTSLSAFLDDSDSESEEGAMEKLAAAISDLFTGDWNEHEDSEC
QHSSEDENEALESSRPKKANPEATFGKCLYVILNSRDTLNVTVTPTFMKVFNELVAQYSS
KIVSVNQDRKAISVTNDIGPQSRVELFEKKSKSTEPDTLLRMKKFENEESAPNSPCKLML
HYQESAAFEEEHLELQLKHDYEQGYDFSTIQSLEFPQETTGSLYEKVNRHYVKIFVPNFA
PVQTNCSKRNWEKLVKLQAVDPAPLGNYHLAVRHGIGRMGRNVNASSPLQIRNETCFALN
ILYQPSVLQQMNMEPVGDVTNPFETTMRIAILGAHDSYNVPLHIAYHCKLFIQPAYAEGH
YASESGIWWRDMAREMDAAYNLICKPKNNSHLDIFALRALLRRNLEVKNSLAHSVPNYLV
KLLPPLTVQNFLPYTLEVANVSLKQGVQAEPGEKCSIYSLDLSKDQKLALKMTYNTLTWT
GQLTVTGHLDDKLIVMVSDQKSERKDMQINVKCDREGGCNLLFYSPYWIVNKTGLPLKVK
ASLAQNVQDCPNDDILLFAYKRHSKQTLNVRVYDSMWSNDVCAECAGTTGLIVCKDTERK
KKYMLFMNATLSNFCPRLTKTVTILPSFLVTNNTPKRLRFMEDNEKTDLWTDLEPSQTAI
YWPDTTSMQIFVKYRESNLISQAIFISRHHRTVLRMDKGTAITAVTSGGTSGPFHISFNQ
YKPGDCPVLIKNYCPDLYLKIQQKDQSHVSLLNPNHSLLYTWDNPIMSRVLTWNIYNNKG
SGFVLDICKDGYGEQKIKFQSVKSSASKQELSSSEDSDSSSSTPNKLNKKVRKDKLVIYW
ACYVEGAQKILLFTQEQRIFENVLATRFQELCTVEALTSLPGIGLSLFTSDVDKKEHFYA
SLCDSPAIWEVNVGEKWKTLTLELAAWIEDKYARATSHKKCQVRDYVHIDFEKMFMLKPF
FAEMRRTYTPAIYCHFRRSPKFHSMDFRLNYLQIDNKHSNCIVFQPIFHANDHQEPLLRV
ALLKQIEQDFHSYRYINIHFGDVCVNIENDLWTKVAGLLKENKKFGRDYSCASAYIVDIT
AIRKNLTAKPNNDSIWDLQQKQSRIEHMSLSSFGIQLSISNRIQMNLLSDTMVLNRILDY
LFPHNMAPYMPMEGVHHKITPTEWVDVDETLTGALGNLTEHVTSRFLQQYYSQVLGLQVL
VNSFDRPAVVETWEPYASQSASSVLFACQCVLGHISMSPAAWETCILDVFPNFNLESCKT
KPSRKKQKNAEEILPRVVSNCGKSFEVGVPIALAQLFVKNYNVSIQCDGEMFFKTSGKAL
FSLITRHPDDKADCVELAKEALRRALVLGEPIRIHQRLTRYRNVLGLLPFSTHESMGQHL
LETVGNTRFSSDRYWAHVPVDRTKKSIVIVSLEHVIRVNKSSLWGPWEIEWSVELDDIIS
LPKINQVELTLNLRQTETIPDQQIKIVGPQEILGWLHDKIEQAMILNMEDKSWTVHDAD
NT seq 9900 nt   +upstreamnt  +downstreamnt
atgttggaaggaacagtggcacgaatcctaaaccaactgctcggcaagtatgtgcaagat
ctggatacggaaaacctaaacgtcggcattttttccggcaccgtgcaactgaacgacttg
aaactgaaacccgaagctctgtacgagttggctttgccagtggaagtgaaagccggaaca
attggcaaaatcggcctgaaaatcccatggtcggccctctggagacacccagtggttctc
agcatcgaagacatccacatggtggtcaatcccatcgtgcgcaatcagccattcgatcct
gatctcaacaagcggctgctgagggccttcaagaggagaactctggaacttttggagtac
gatggaggccttttgggcggcccggctgcttttgctgagcatttggtttcccacatcctc
aactacatccagatcaacatcatcaatgtccatgtgcgctatgaggacgacagcagctgg
attgagccaatagcagctgggctttgcatagcgtcgatctccgcgcaaagcaccagcagc
aaatggaagcgcgccaacaatgacccacacctccaaacaggctactacttgatcaaaatc
gaggccatgtcggtctattggaacaccaaggtgactcccaagcggtgggacctgccgtcg
cagtactaccaatggaggaacgccatggtgaagagcttgcagagcttctcctttgagggc
gaggtgttcaactttgtgttaaaccccatgctgaccaagatcaagatgacaatcaacaag
tccctagagggccacgtagcggaaatcagcaccgacgttatagtgcaagactgcaacttg
caactttccaagaaccaatacgacgcgatcattgcagtcagcagcagcctgcaaaggatg
atgatcagttggcagtttctatcagctaggccggtggccaaggtgctgaagaacgaaaag
gcctggtggaagtacgcctgttgggccacactcgagcaacgggtcagaccaatgagctgg
agccggataaaaacggcccgggaacactacaagaagtacatggacacctacaagcagatc
atcgccaatccccacgacactgagctgaagctggatcttcagcagcacgaagacaatctt
tccatcgtcaacgtggtcattgccaggcagcacacgaggttactgatgcaatccaacagc
caaactgagaagagcttctggtcgatgctgccatctccggaaaaaatcgttttgtgccag
aagattgggtattacgacaagaacgaaacggccagacccatcgaccacacgtgcaacttg
aagctgggcaactgcaacctgatcctcaccaaccaatcgcaggaggtgctggtggccacc
ctcactcagaccttgttgacggtcaaaccgcagtttgtagaccaaacgtatcgggcctcg
ttgaaagtagagggcttcattgtggagggaaacggaccgaaaaacactctgaactgyctg
ctgtcctccgaacatttgaaggacagtccggctttcgtcttcatcgcctactgggagaaa
ctgaagacccacaatggtttcgctcatcggctrcaagtgactttgaatccagtcgagtgc
atttataataagcratgctttgaagatttggaaactttcctgcaagccaccgcaagctcc
aagcgaacgaacctgctgcaagtggtcaggaaaatgccaaatctcctctataaaagggtg
cggaaaatgatcgccagcaaatgggagctgaacttgaacatcaaatgcccctacttggtg
atacccgagtccagctcctgcaccgccccagaggaaaacgttctggtggtcgacctggga
aagttctggatcagaactgagatctgccaacagacccagatttgcgaaaccgccaccaag
atggagttggaagaacagctttactccaagttgcacataaattgcaccaatctgcaagtt
ctattctgtgataaaaacgaccattggaaggaggcgagaaacgagaaggatacagccatg
catctgataccaaaaacctcgtttacggccgtttacgccttggcggctttaaacgttaaa
tccatacccaggctgaaattcaacatagcttgcaacaccctcaagctaaacatctcggaa
cggaagaccgggttattgttgaagttcttcaacgtggatcagattcgaatcgacgttata
accgaggcgatgcaaccggacatctacaagaaggaccgagtgaaggagctgctgaacgtt
ccgacgttgaagaggatgcaggaaaggatcagcctctccgacacgtttaagtatcggaag
cacaaaatactcaatggatttgaggagacaaagaagacaaacaaaagcttcgaactaaac
gaaccgaaaccaaacatgaacgaagcatgggccagaacggtggacttaccgggcctcgaa
gacaacatttcgccctccaacaacatcgaggttctatacggattggtcgtaaacgagttt
tcgatggtgttttccaaatcgagcgacagcactgatcggcagtacttgatgttgcgactg
gggcaattctccatggatatcgcgttcatgacgtttgggccggcttaccaagtttccttg
cacagtgtgctgcttaccgataagatgcacaccacttcaagcgggcagtacttggacctg
attttcactcctttgcccaacaactctgatgtggttacagtgctttatcgcaaagtgaac
gcaaaatgcccagaattctggagccacttccacggagtggaaacatcgctggtggccaac
atcggcaccttgcaccttctggttcatcaggaagccattcacacgttcatcaagtactca
aaatacctctcaaacaaaataaagcaccaagcgtcccagtatctgaagaacctggtgagg
aggtttattgccagcataaactccaccctgcacaagccttcagacgtgccagttccaccg
ggttcagtgaaattctcccaatccgccagaatgagcgacctgaacgtggtggtttgcgac
tccgacttcgacatcatcaacatccacttatccgggttggagctggattttctgttccgc
gccaatgagagattcgtgttcaggagctacttgggcagcatcaatgtggaccacttgagc
caagttacgatgtactccaaagtgctctacaccgatgaggacaaagtcttcgaggtgaaa
tatgtgcgcaatgcggcccatttgaagaacagcgaagtcctagacagacagtatgaagat
gctcatgatggaagcttcaagttccagctggggcggattcatttcattttcttgtacaag
ctgatggtgcaactgcagcgcttcatcatcaacctggaggtgttggagtatttggaaagc
tacctccaattgacaaggaaagccgttagagtggcaacggacactttgaagaacaaaacg
aaaatcagcctatcgattaacgtgttcgggccagtgtttttgctgcctcaaaagtcctcc
tcgcccaacgtcctggtcgtagacactggcaacttgaggatagagaacttcttcaaggag
tccgaaactggagtggtggaggacatcctggctaaactcaaggaggttgtagtgaccaga
ggagtgatgtcgttgacttccactctggaaatgcaggaaaccctcgtggaaccgatctgc
atcaacatggacatcaagaagtacaccaacgccaaaacgttgcagaaaaactgggaaatt
ggcgcgattctggaaaaaatcgaactcactttgggccagaaggacttggccatgctcatg
gccatctatagcgacaacatcggagaagccaaactcgtggacttgctaccagaggaaatc
cgatcgccgatttccgacacactcgaccaagacgacaacgtgagggaactggaagcgttc
ttcagcgaaccgaagcagaagttcgtgacgggaaaatgcaggatcgaagaagtgaaactc
gtgctgttcttcgacgctggtgaacttctcagttcgccaattcgagacttaaaccatggg
ctctgcaagctggagatcaacgacatcgacacctcagtggtggtttacactgataagagc
tcagacggaaaactctccattgacacgatcctagtggaggaaatcgggcctgatgccaac
aagcacagcaaaacagtgttgagttcgccggcagaagacggccggaacaacaacatctgc
aacatcaccgtcaacaagcccccgatagtggacgtgaatttccatcaaacgaagaacgga
gatcaatcggctgatgttatagtgggccggctctgcctctccctatcggtgccattttgc
gaaaaggttgccttgtacgtgctggaatgcatcccaagagaaatcaacgaactgggaatc
gtcaacgctggatacgaaggcgaaacgaggagatttgacgagaagcgacgcctgcaaaac
agcctcactatttcagtgagagtgaacaagccggagctgatgtttctggttgagaccacg
tccaacaagaaaagatatttcatcaccaagagcgagattctggtggacttttcccgacac
tgtaaccgcctcaacttggttacatccctctcggggttgcacagtttattctacgacctg
agcgagtactcagaccagccctatgtagtgctgaagcagtgcgacattgagctggcgagg
aacgtggaggaacactcggaaaaaatcgttctgagcatttctggaatgtacgtcaagctc
tgttctgaggtcgtccactcggtgaacgacatcttgaacgacatagtggagcactttaag
gtgcccgagatggaactggagcggaaatggcagcggaaatgcagcactgttgaggctgcg
cctgaagagctgtgggagcccaagaaaatgcccccatataccactaaggcgaattccgca
aatctaccaacccacgcctgcagccagagcctcacggtacccaagtttgaggtggttctg
atcttcgagctggatcagattcaggttctcctcctcaagtcctccatggagcttcagctg
cagaattggaaccacctggtcaacagcaccggaactgtttccctccaggccaactatttc
aatgaaagcgcacagtgttgggagccggtgatcgaccccgttatgctagaggagatggag
tatcgaggctgggaatgcaaaataactgttttccaagacaaaccactgcaaatcaacgac
ccggaggaaaagctggaaaaggtgcaacagcgcaaaaaaccgcctccaaaccagtcgaga
gctcagaaggcctcccggtcctacacgactactgaaagcgaggactctggcgaagatatg
gcctacttggagccgatgaactcgctgaacctcaacattaatcggcgagtcaaaaccagc
ttgagcgccttcttggacgactcagacagcgaaagtgaggagggagctatggagaaactg
gccgccgctatttcggacctctttacaggtgattggaatgagcatgaggacagcgagtgc
caacattcgagcgaagatgaaaacgaagctttggagagttcaaggccgaaaaaggcgaat
ccagaggcgacttttggaaagtgcctttacgtcattctgaactcacgggacacgctcaat
gttactgtgactcccactttcatgaaggtcttcaatgaactggtcgctcaatattccagc
aaaatcgtatccgtgaatcaggatcgtaaagcgatcagtgtcaccaatgatatcgggccc
caatcgcgagtggaactgtttgagaagaaatcgaagagcactgagccggacactttgctc
cgcatgaagaagttcgagaatgaagagtccgcacccaacagcccctgcaaactgatgctg
cactaccaggaaagtgcggctttcgaagaagagcatcttgagctgcagctgaagcacgac
tacgagcaaggctacgacttctcgacgatccagagcttggagtttcctcaagaaaccacc
gggtccttgtacgagaaagtcaacagacactacgtgaaaattttcgtgccgaacttcgcc
cccgtgcagaccaactgctccaagaggaattgggaaaaactggtgaaactgcaggcggtt
gatcccgccccattgggcaactaccacttggcggtgcggcatggcatcggcagaatgggg
cggaatgtgaacgccagctcccctttgcaaatccgcaacgaaacctgcttcgctttgaac
atcctctatcaaccctcggtgctgcagcagatgaacatggagccggtaggcgatgtgacc
aatccgtttgaaaccaccatgcgaatagccatcttgggggcccacgacagctacaatgtg
ccgcttcacattgcgtatcattgcaagctgttcattcaaccggcttacgccgagggccac
tatgcttcggagtctggcatatggtggagggacatggcgcgggaaatggacgctgcttac
aacctcatttgcaagccgaaaaacaactcgcacctggacatcttcgcgttgagggcgttg
ctgcggaggaacttggaggtgaagaattcactcgcccactcggtgcctaattacttggtg
aagctcctgccgcccttgactgtgcagaacttcctcccctataccttggaggtggccaat
gtctccctcaagcagggggtccaagcagagccgggggaaaagtgcagcatttactccctg
gacttatcaaaggaccaaaagctcgcgctgaaaatgacctacaacaccttgacctggact
ggccagctaacggtaactggacacttggacgacaagctcatagtgatggtttctgaccag
aaaagcgagcgaaaggacatgcagattaacgtgaagtgcgacagagagggcggctgcaat
ttgctgttctactcgccctattggatcgtgaacaaaaccggcctaccactcaaagtgaag
gcatcgctggcccaaaacgtccaggactgtcccaacgatgacatactacttttcgcctac
aaaagacacagcaaacagacgctgaacgttcgagtctacgactcgatgtggtctaatgat
gtctgtgcggaatgcgccggaaccaccggactgatcgtgtgcaaagacaccgaaagaaag
aagaaatacatgctcttcatgaacgcgactttgagcaacttctgcccgaggctgaccaaa
acggttaccattctgcccagcttcttggtaaccaacaacacgcccaaacgcctaagattc
atggaagacaatgaaaaaactgacctgtggaccgatctggagcccagtcaaacggcgatt
tattggcccgacaccacgtcgatgcagattttcgtcaagtaccgggaaagcaacttgatt
tcgcaagcaatattcatatccaggcaccacaggacagtgcttcggatggacaaggggact
gcgattactgcagtaacaagcggagggacttccggccccttccacatatcattcaaccag
tacaagccgggcgactgtccagtgctgatcaaaaactactgtcccgacctctacttgaaa
atccagcagaaagaccaaagccacgtcagtctgctgaaccccaaccacagcctgctctac
acttgggacaacccaatcatgtccagagtgctgacctggaacatctacaacaacaaggga
agcggatttgtgctggatatctgcaaggatggctatggggagcagaagatcaagttccag
tcagtgaagagcagcgccagcaagcaggagttgtcgtccagcgaagactcggacagttcc
agcagcaccccgaataaattgaacaaaaaagtccggaaggacaagctggtcatctattgg
gcctgctatgtggaaggggcgcagaaaatcctgctgttcactcaggagcagaggattttc
gagaacgtgctggccactcggtttcaagagctctgcacagtggaagcgctgacttccctg
cctggcatcggcctgtcccttttcacctcagacgtcgacaaaaaggagcatttctacgcc
agtttatgtgattcgccggcaatttgggaggtaaacgtgggcgaaaagtggaaaaccctc
accttggaactggccgcctggatcgaggacaaatacgcaagagccaccagccacaagaag
tgccaagtgcgcgactacgtccacatagactttgagaaaatgttcatgctgaagccattc
ttcgcggaaatgagacgcacctacacaccagctatttattgccactttagacgctccccc
aagttccactcgatggactttcgcctcaactatctccagatcgataacaagcacagcaat
tgcatagttttccagccgattttccacgccaacgaccatcaagagccgctgcttagggtg
gcgctcctaaagcaaatcgagcaggactttcacagctaccgatatatcaacatccacttc
ggggacgtttgtgtgaacattgaaaacgacctctggaccaaagtggcgggccttttgaag
gagaacaagaagtttggaagggactacagttgcgcttcggcctacatcgtcgacataacg
gcgatcaggaagaacttaacagcaaaacccaacaacgactccatttgggacttgcagcag
aaacagtccaggatcgagcacatgagcttgtcgagcttcggcatacagttgtccatctcc
aatcgaatccagatgaatctgctgagcgacaccatggtgttgaacaggattttggactat
ttgttcccacataacatggccccttatatgcccatggaaggcgtccatcataaaataact
cctaccgaatgggtggatgtggatgaaactttaaccggcgcattgggaaacttaaccgag
catgtaaccagcaggtttttacagcaatactactcccaagtgctgggattgcaggttttg
gtaaacagcttcgaccggccggctgttgttgagacatgggagccttatgcttcccagtca
gcatcctctgttttattcgcttgccagtgcgttctggggcacatctcaatgtcgccagct
gcatgggaaacctgcattttggacgttttccccaacttcaacctggagagctgcaaaacc
aagcccagcaggaagaaacaaaaaaacgccgaggaaatcctgcctagggttgtatcgaat
tgcggaaaaagcttcgaagtgggagtgccgatagctctggcgcaactcttcgtcaagaac
tacaacgtcagcattcagtgcgatggggaaatgtttttcaaaacgtccggaaaagcgctg
ttttccctgataaccaggcatccggacgacaaggccgactgcgtggaattggccaaagaa
gcgctgagaagagcgctggttctaggagaacccattcgaatccatcagcgcctcacgcgt
tacaggaacgttttggggctactgccattctcaacgcatgaatccatggggcaacatctg
ctggaaactgtgggcaacacgcgattttccagcgacagatactgggcccatgtgccggtt
gatcgcacaaaaaaatccatcgttatagtctccttagagcacgtgattcgcgtcaacaaa
tcctccctatgggggccgtgggaaattgaatggtccgttgaactagacgacattatttct
ttgccgaaaatcaaccaagtggaactgactctgaatttgagacagaccgagaccattcca
gaccagcagattaaaatagtggggccccaagagatactgggatggctgcacgacaaaatc
gagcaagcgatgatcctcaacatggaggacaaatcctggacggtgcacgatgcagattaa

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