Dendroctonus ponderosae (mountain pine beetle): 109539450
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Entry
109539450 CDS
T04899
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109539450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpa04131
]
109539450
Membrane trafficking [BR:
dpa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109539450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
zf-RING_2
WD40_CDC20-Fz
zf-RING_5
ANAPC4_WD40
zf-rbx1
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-RING_UBOX
zf-RING_11
TPR_VPS8_2
zf-ANAPC11
zf-C3HC4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
109539450
NCBI-ProteinID:
XP_019762755
UniProt:
A0AAR5PP14
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MIMTSGSEEYTVEDSDESLLDFREINDFDFDIPEVAAPTLEKVLWDMESEEGSDTTSLQS
FQSMTSRFRSMMSHCILQGLSTQISSAADRVKAGLPSVIANSLKYVAVGTSHGYILNFDS
EQNLCWCYQNPSLVDQGAISALAFNLESIRLLVGYERGYITMLDAKSGDMIRQMPDAHAP
QTAVLHLRFTFLHNLALCGDSSGCVFSLGFNRKLGMRTWDSKCLFSGARGEVCVFEPLVQ
GHDVNFLSRHALVAMATLSKIIVISVKPRLKVHFNQQLPKISSSLPLISWQLVSIGKTFQ
PVLAWARANYLHYARLITNFGSSSNNRIRLMPLRNVQLPYTLTALHWLGTRHLALLDTSE
NLHLVEVRTQRELELLELSNAGLVYGSAHFKALAVGGGVSEAFALAGERACYNSLSSRGT
QLLLLGTKAVHLVKLRTWPERIIFLSEQGRWAEALNLAAEEGLNKESFTIELLTRYLENL
NQNTVDKDSLTAAVACCVRLNKIDILCNELLEAVTTDQHNLDWYYSLLTDHICGGSLKDL
SPSVSQMLVAHLEHRDPQLLESILLSLEIGCLDLHQVLKVCKRLNLYNAWIHITTRTLGD
YTSPLVEFLTDLTPSNNRLGNTLLVYVSSCLAGLGYPNGSIPESDVPRVKYDVLRCLETV
HSINGKSDEGSYPYLRALLRYNTRECLNVVELAFTEAEFLGEMGLLQRQRLIHILMQIVT
PPQFSDSQIINLACFISRLVTNDSLAIDESMLTSVIQSLTNLAGDSLTLRDHSEKEQAWL
DLLKAKKLTQFDLTKLLEMALKSRCYRVAEHLHELQGNFSSILECYLKDPVRVSDVFNYI
LSYIQAPERCVKQQFLENFNHLAAISCEKATEIVIDHFPDYIEALTDLLSDDTDLQYSFL
SELVSSDLKLPDKIAELFLEQVCARHPCKACEFLLARPCRTEAALEITRKYRVHQATALL
LEQSGEWTEPLELLISNDLVDEAVALCIRGAEHLDPEGAQTLWLTLLQSKRSLKKTSLRQ
LLHAAAPHVPPDQLLDLVNNANYGEVKSTVLGMLSDYKHDIDLLQSSMQVLGKDLHYQLA
KTFQQNGKGVSIRKLTCDLCQKSFSYRKEVDTNMSICVWGCGHSFHSQCIGASDSNDFCP
VCRRIGKPLPKMKKILEKSPYRGKTILRPDLEGHF
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgataatgacttcgggcagcgaagagtatacagtcgaagactctgatgagtctcttttg
gacttcagagagatcaatgacttcgattttgatatacccgaagtggcggcacccaccttg
gagaaggttctgtgggacatggagtcggaagagggaagcgacaccacgtcgttacaatcc
ttccaaagcatgacttccagatttcgctccatgatgtcccattgtatcctgcaaggcctt
tccacgcaaatttcctctgcagctgatagagttaaagccggtttaccctcggtgatagcc
aacagtttaaagtatgtggctgtgggcacatcgcatggctacattctgaatttcgattca
gaacagaacctgtgctggtgctaccagaacccgagcttagtggatcaaggagcgatatct
gccttggcctttaatctggaaagcatccggctgcttgtgggatacgagcggggctacatt
acgatgctggacgccaagagcggagacatgataaggcaaatgcccgatgctcatgccccg
caaacggccgttcttcatctgcgattcacttttctccacaaccttgccctgtgtggagac
tcgtctggctgtgttttttccttggggttcaatcgcaagttggggatgcgaacctgggac
tccaagtgtctattttctggggctcgaggcgaggtttgcgtctttgaaccgttagtccag
ggccatgatgtgaatttcctaagcaggcatgcgttggttgcaatggccaccctatcaaag
attattgtgatatcagtaaaaccgcgcctaaaggtgcactttaatcagcagctaccaaag
atatcttcatccttaccattaatttcctggcaattagtttcgatagggaaaacgtttcag
ccagtcctggcttgggctagagccaactacttacactacgcgaggttaataacgaacttc
ggttcaagcagcaataatagaattagactgatgcctttacggaatgtacagttgccttac
actttaacagcattacattggctgggcaccagacatttggccctgttggacactagtgaa
aatctgcatctagtcgaagtgcgcactcagcgcgagctggaactgctggaactttcaaat
gctggcctggtttatgggtcagcccactttaaggctttggcagttgggggtggagtgagc
gaagcttttgcccttgctggcgaacgcgcgtgctacaacagtttgagcagtagagggacg
cagctactgctgctaggaacaaaggccgtccatttggttaagctgcgaacgtggcccgag
cgcataattttccttagcgaacaaggcagatgggcggaggctctgaatttagccgctgag
gaaggcctgaacaaggagagcttcaccatagagctgttgactagatatttagagaatctg
aaccaaaacactgtggataaagacagtctaaccgcagcagttgcttgctgtgttagattg
aacaagattgatattctttgcaacgagctgctggaagcggttacaactgaccaacacaat
ctggactggtactattcactgctcactgatcacatttgcggcggtagtttgaaggacttg
tcgccgtctgtttcgcagatgttagtcgcgcatttagagcatagagatccgcaactactc
gaaagcattctactgtctttggaaataggctgtttggatttgcatcaggtgctgaaggtt
tgcaaaagactgaacttgtacaatgcctggattcacattaccaccagaactctgggcgac
tatacttcgccgttagtcgagtttctaacagatttaacgcccagtaataacaggttgggc
aacactctgttagtgtacgtatcatcttgtctagcaggtttgggctacccaaatggaagt
atacccgaaagcgacgttccccgggtaaaatatgacgtgctaaggtgcttagagacggtg
cattcgattaatggaaaatccgatgagggcagctatccctatctacgggcgctattaagg
tacaacactagagagtgtctgaatgtggtggaattggcctttactgaggccgagtttttg
ggcgaaatggggctgttgcaaaggcaaagactcatccacattctcatgcaaatcgttacc
ccgccccaattttcggacagccagataatcaacctggcctgcttcatatcaagattggtg
accaacgacagtctagctatcgacgagtcgatgctaacctcggtgatacagtctttgacc
aatttggctggcgattctctaacccttcgggatcactcagaaaaagagcaggcatggctg
gatttgctgaaagcaaaaaaactcacccagttcgacttgacaaagctgctggaaatggca
ctgaagtcgcgctgctatcgagtcgccgaacatttgcacgaactgcagggcaattttagt
agcatcctggagtgctacctgaaggatccagtgcgcgtaagcgacgtgtttaactacatt
ctcagctacatccaagcgccagaacgctgtgtgaagcaacagtttttagagaatttcaac
cacttggcggcaatcagctgcgaaaaggccacagagatagtcatcgatcattttccggat
tacatcgaagcgctaacagatctgctcagtgatgatacggacttacagtacagttttcta
agtgaactggtgtcaagcgatcttaagttgccggataaaatagccgagctgttcttggaa
caggtgtgtgccagacatccgtgtaaagcgtgcgaatttttattggctcgaccgtgtaga
acggaagcagctttggagattacacgaaaatatcgggttcatcaagcgacagccttgctg
ttggagcaatcgggagaatggactgaacccttggagctgctcatttccaacgacttggtg
gatgaagctgtggctttgtgcattcgaggcgccgagcatctggaccctgaaggcgcccag
actttgtggctgactctattgcaaagtaagaggagcctgaaaaagacgtcgttgaggcaa
ctgctgcatgcagctgcgccgcatgttcctcccgatcagctcctcgatttggtgaataat
gctaattacggggaagtgaagagcacagtgttgggaatgcttagcgattataagcacgac
attgatttgctgcagtctagcatgcaagttctgggcaaagatctccattatcaattggcc
aagacatttcagcagaatggaaaaggtgtttcaatcagaaaactcacttgcgatctttgc
caaaaatcgttttcttaccgcaaggaagtggacacgaatatgagcatttgcgtatgggga
tgcgggcattcctttcactctcaatgcatcggtgccagcgattccaacgatttctgtccg
gtttgtaggagaataggcaaaccgctgcctaaaatgaagaaaatcttggaaaaaagccct
tacagaggtaagactatactaaggcccgacctagaaggtcatttttaa
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