Dendroctonus ponderosae (mountain pine beetle): 109539590
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Entry
109539590 CDS
T04899
Name
(RefSeq) integrin alpha-PS2
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP_3
DUF348
Integrin_alpha
FG-GAP_2
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
109539590
NCBI-ProteinID:
XP_048521387
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
MHFARTMGSFYQVLFFVLFWSVFTAEGFNVDAFNYAVYGTEDNSMFGFTVAVHKQKYDRG
WILVGAPEAQSQYQSSSVRLGGVVYKCRTDGDDPCQEIPFDRDGNQYMAGKQMDQKSDQW
FGATLSTSGALGGPIVACAPRYVWYSKEMNRRDPVGTCFVADSSFETFEEYSPCRTSNWG
YHRQGSCQAGFSAAINSIGDRLFVGAPGSYYWQGQMYSIDANSRFNYTPGLLGTTYGAKG
SVHQQSLETRPAVFQTRESEQLDDDSYLGYSTITGDFLGTGEQGIAVGMPRGAELHGKVL
LYTWNLTNYKNISSSQLGSYFGYSLAAGDLDGDGKLDLIIGAPMHTEPNTEDKYDVGRVY
VFYQGGGFGSFNKSSFIEGMNSRSRFGHSVAYLGDMNQDGFHDFAVGAPYDGEFNRGAVY
IYYGSSKGVLEKFGQVIYAEDLNTRSGIPVNTFGFSVTGGLDMDGNDYPDMAVGAYLSNS
AFFFRSRPVVRLEAFVRFRTENKQIDIKNKNCNLPTGERATCTTIDFCIKYGGKGIPQQI
QLHVQYILDSKKSNIPRMMFLRRGSHTLNDTITLYKDSQDTCQTEEIYIKNDIRDKLTPL
EAEVKYFMIQEEDAFDYRRMRNPQSQLKPVLDLNLPPSRKDSIIIQKNCGHDNICIPNLH
INITKNVEKYLLDSKTNLEFDIIVSNLGEDSFETTLELSYPEGVHYKKTEVKDDVLGILC
SPGLKRTLTCEIGNPLPARKIASFRMIFVPYHTQGIPPTYEFDVHVNSTNPESNDTLQDN
YSRITIDIWVDSALDVSGVSIPQEIYLSNTTQYSSETIERESEIGPQVTHLYTLTNKGPA
TINEAEMYFLWPWQTLAGDDLLYLLEQPHVPEGVTCDIPAPANYKNYQLDYNPKSVWERL
QIDSSSRDMASHYDGVKVETGRNITAVTSVSESTIETSRLNEQIKNSGGDSSKTFEERQN
QPNAEEQQGVEIWGQDAGLDSDGTINRAGQTVYRKSEWHTLVVDGKPQTVWTNVTTVKDA
SGKIIKTFYSTDNSGREDSFGQNRDGSGLKSKHKKPSIVYSSSGAGNSSSGMENLSITAG
SVKAEGTQEETVQRKTSSQQSSGGSSGSTNEDRLIEEESYTVGGGAREGGATTPSYIEGH
RIRQGAQETASTVSASLDRERANEARLQYEQKRQYAERIRLQEERRRKLEEQQQAGKNVV
VSADEEREQYQRRRKQEEEERRRQQEQLERANKAREQEERARQLAYNEQVRRQEAQRMEE
ERRRQQLEAQRSRQYTPVEQDSRRLQQQREEAWRKEHEERRQQQIRQREEEERRRQQEDQ
ETRRLEAERRRQWQQGSSEGRSQSGYFDERNEQSGAARSGSPPRVLVNHTWTVEGTASLD
DIDPAAGGQINFGQNAASGNNFRTQTIDLGMVGRGGAPADASRQNVEWTSSGQRTRGGTF
SGSLEGGVSDHNEYESEWERRNWEGAQPRDMDTGTHRGKRQVPDIDPDIDDILRCSATKC
FYMRCVVGTLKKDEFISIALRSRLNVRAVRQLSSTQSVKLSSMMVARITKLPYIGKPKEQ
VLHSHEIFTDIPAGEQELTPKVVPLWIILLSAIAGTLILLLVILLLYKCGFFKRKRPSSA
PERQPLRTNGYHPSD
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgcaaggactatgggaagtttttatcaagtgttgttttttgtgcttttttgg
tcggttttcacggccgagggatttaacgtggacgctttcaattatgcggtgtacggaaca
gaggacaactccatgtttggattcacggttgcagttcataagcaaaaatacgacagagga
tggatactagttggggcgccagaggctcaatcacagtaccaatcttccagcgtgcgactg
ggaggggttgtctacaagtgcagaactgatggggacgatccttgccaggaaattccattc
gatcgggatggaaatcagtatatggccggaaagcaaatggaccaaaagagcgaccaatgg
ttcggagccactctaagcacgtcgggcgcattgggaggacccatagtggcttgtgccccc
cgatacgtttggtacagcaaggaaatgaaccgaagagatcctgtgggaacttgctttgtt
gccgactcttcgttcgaaacgtttgaggaatattcgccttgcagaaccagcaattggggg
taccatcgacaaggatcttgccaagctggttttagtgctgccatcaattccataggagac
cgactgtttgtgggagcccccggaagctactactggcaagggcaaatgtactctatcgat
gccaactccagatttaactatacaccgggcctgctaggcacgacgtacggcgccaaaggt
tccgtccaccagcagagcctggaaactcggcctgcagtgttccaaactagggaaagtgaa
cagctggacgatgactcttatctgggatattctactattactggggactttctgggaacg
ggcgaacagggcattgcggttggaatgcccagaggcgcggagcttcatggaaaggttctt
ctatacacttggaacctgaccaattacaagaacatttccagtagccagttggggtcctac
ttcggatattctttagcggctggggatttggatggggatggaaagttggacctgattatt
ggggctccgatgcataccgagcccaacactgaagacaagtatgatgtgggccgagtgtac
gttttctaccaagggggcggatttggaagcttcaacaagtcctcctttatagaagggatg
aattcaaggtcgcgctttggacacagcgtggcttatctgggggacatgaatcaagatggt
ttccatgactttgctgttggggcgccctacgacggagaattcaaccgaggggctgtctat
atctactacggctcctcgaagggtgttttggaaaaattcggtcaagtgatctacgcggaa
gatctcaacactagaagcggaattccggtgaatactttcggattttccgtcactggaggt
ttggatatggatgggaacgactaccccgatatggctgttggagcctacttgtccaattcg
gcctttttcttcagatcaagaccagtggttcggctggaggcatttgtgcgcttccgcacc
gaaaacaagcagatcgacatcaagaacaaaaactgcaacctgcccactggcgaaagagct
acttgcactaccattgacttctgcatcaaatatggaggcaaaggaataccacaacagatc
cagttgcatgttcagtacattcttgatagcaaaaagtcgaatataccgaggatgatgttt
ttgcgaagaggttcgcacacgctgaatgataccatcacattgtacaaagatagtcaagac
acgtgccaaactgaggaaatttacattaagaacgacattcgcgataaattaacacccctc
gaagcggaagtcaagtatttcatgatccaagaagaggacgcgtttgactatagacgcatg
cgaaatccgcaatctcagttaaaacccgtcttggacttgaacttgccgccctccagaaag
gattcgatcatcatccagaagaattgcggccatgacaatatttgcattcccaacctgcac
atcaacatcaccaagaacgtggaaaagtacctgttagactccaaaactaacttggagttc
gatattattgtttccaatttgggagaggattcttttgaaaccactctcgagctaagctat
ccggaaggagtgcactacaagaaaactgaagtgaaagacgatgtgcttggaatattgtgc
agccctggattaaagcgaacgctcacttgtgaaatcggcaatcctttaccagctcgaaag
attgcttctttcaggatgatttttgtgccctaccatacgcagggtattcctcccacttat
gaatttgatgtgcatgtgaacagcaccaacccagaatccaatgacacgttacaggacaat
tacagtcgcattaccattgatatttgggttgattctgcattggatgttagtggagtgtct
attccgcaagaaatctacctatcaaataccacccaatattcgtcggaaaccattgaaaga
gagtctgaaatcgggccacaagttacccacctgtacacgttgacgaataaaggtcctgcc
actatcaacgaagccgaaatgtacttcctatggccgtggcaaactttggcaggtgatgat
ctgctgtatttactggaacagccccacgtccccgaaggggtcacatgcgacattcccgct
ccagctaattacaaaaattaccagttagactacaatccaaaatccgtctgggagcggctg
cagattgactcttccagccgtgacatggcgtcacattatgatggagttaaagtggaaact
ggccgcaatattacagctgtgactagcgtttccgagagcacaattgagacgagcagactg
aacgagcagattaagaattccggtggtgatagctcaaaaacgttcgaggagcggcagaat
caaccgaatgcagaggagcagcagggagtagagatctggggtcaggacgcaggtctggac
tctgatggcacaataaacagagcaggacaaacagtataccgaaaatccgaatggcacacg
ctagtggtggacgggaagccacaaacggtctggaccaacgttaccactgttaaggacgcc
agtggcaagattatcaagacgttttactccacggacaattctgggcgtgaggacagcttt
gggcaaaaccgagacggaagtggcctcaaatccaagcacaaaaaaccatcgatagtttac
agctcttctggggcaggaaactcgagtagtggcatggaaaatctgtcgataactgcagga
tctgttaaagctgagggaacccaagaggaaactgtgcaacgaaaaaccagcagtcagcag
tctagtggagggtccagcggatctactaacgaggacaggttaatagaagaagaaagttac
acggtgggaggtggagcacgcgaaggaggcgccacaacgccctcgtacatcgaagggcat
cgcattaggcagggagcgcaggaaactgcttccactgtgtctgcatctctagaccgagag
cgagccaatgaggctcgcttgcaatatgagcaaaaacgacagtacgcggaacggatccgt
ttgcaggaggaacggcgcagaaaactcgaagagcaacaacaggcaggcaagaacgtggtg
gtgagtgcagatgaggagcgcgaacaataccagcggcgtcggaagcaggaagaagaagaa
agacgacgccaacaggagcaactggagcgcgctaataaagcaagggaacaggaagaaagg
gcgcgccagctagcttacaacgagcaagtgaggaggcaggaagcgcaacggatggaggaa
gaacgaagaaggcagcagctggaagcccagcgctcccggcaatatacaccagtagagcaa
gacagtcggaggcttcagcaacaaagggaagaagcatggcgtaaggagcatgaagaaaga
cgccaacaacaaatcaggcagagggaggaggaagagagacgtagacaacaagaagaccaa
gaaactcgacgcctggaagcggaacgcaggcgacagtggcagcaaggctccagtgagggt
cgatcgcaatctggatacttcgatgagcgcaacgagcaatcgggagctgcaagatccgga
agccctcctcgcgtattggtaaatcacacttggactgttgagggcacggcttctctagat
gacattgacccagctgcaggaggccaaataaatttcggacagaatgccgcttccggtaat
aacttccgcacacagactattgatttggggatggtgggacgtggcggagcacctgcagat
gcttcaagacagaatgtggagtggacgagcagcggccagcggacccgaggagggacattc
tccggcagtttggaaggaggcgtatcagaccacaacgagtacgagtctgaatgggagagg
cgcaactgggagggcgcccagccaagggacatggacaccgggacgcatcgaggaaaacga
caggttccagatattgatcctgatattgacgacattctgcggtgtagcgccaccaagtgc
ttctacatgaggtgtgtggttggcacactgaagaaggacgaatttatttcgattgctttg
agatcgcgactgaacgttcgggctgtaaggcagctaagtagcacccaatcagtcaaattg
tcctcgatgatggtagccagaataaccaagctcccttacatcggcaaaccgaaagaacag
gtccttcacagtcatgaaatatttaccgatattcctgcaggggagcaggagcttacacca
aaagtggtgcctctgtggatcatcctgctctcggccatagcgggcactttgatcctgctg
ctagtcattttattattgtataagtgtggcttcttcaagcgaaaacgaccatcctcagct
cccgaaagacagccattgaggaccaacgggtaccatcccagtgactaa
DBGET
integrated database retrieval system
