Dendroctonus ponderosae (mountain pine beetle): 109539687
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Entry
109539687 CDS
T04899
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109539687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109539687
Enzymes [BR:
dpa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
109539687
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
90S particles
Other 90S particles
109539687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Pox_C4_C10
APAF1_C
Motif
Other DBs
NCBI-GeneID:
109539687
NCBI-ProteinID:
XP_019763162
UniProt:
J3JWD0
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All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MNRKRKIKDSKSDEFEFDPMPKHMVTAHLKNQEKRLIIVLHDAQLETVKVGNKFELLNCD
EHTHILKKNNRDVSSCRPDITHQCLLMLLDSPLNRAGLLQVYVRTSNNVLIEINPQTRIP
RTFKRFAGLMVQLLHKFSIRAEGGPKLLKVIKNPLVDHLPVGVRKIAMSFSSKVVKNCRD
LVPKTEDPIVIVVGAMARGNLDVDYAEETISVSNYPLSAALTCTKLCSAFEEEWGVL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaaacggaaaatcaaagactcaaaaagtgatgagtttgagttcgatccaatg
ccgaagcatatggtgaccgctcatctcaaaaaccaagaaaaaaggctgattatagtctta
cacgatgcacaactggaaactgttaaggtgggcaacaagttcgagctgctaaactgcgac
gaacacacgcatattttaaaaaagaataaccgagatgtctcctcctgtcgaccagatatc
actcaccagtgcttgcttatgctattagatagcccccttaacagggctggacttctgcag
gtctatgttcgcactagcaacaacgttcttatcgaaatcaacccccaaacgagaatcccc
aggacttttaagcgatttgctggtctcatggttcagctgcttcacaagttttcaataagg
gcggaaggaggtcccaaactcctgaaagtaatcaagaatccattagtcgaccaccttccg
gtgggagtgaggaaaattgccatgtcgttttcgtcaaaagttgtaaagaattgtcgcgat
ctggttccaaagactgaagatcctattgtaatagtagtaggagccatggctagaggaaac
cttgacgtagactatgcagaagagacgatatccgtaagcaattaccctctgtctgcagcc
ttgacttgtacgaaactctgttcagcctttgaggaagaatggggcgtattgtaa
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