Dendroctonus ponderosae (mountain pine beetle): 109540009
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Entry
109540009 CDS
T04899
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109540009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109540009
03041 Spliceosome [BR:
dpa03041
]
109540009
03032 DNA replication proteins [BR:
dpa03032
]
109540009
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
109540009
Spliceosome [BR:
dpa03041
]
Complex A
U1 snRNP components
Sm proteins
109540009
U2 snRNP components
109540009
Complex B
U1 snRNP components
109540009
U4/U6.U5 tri-snRNP components
109540009
Complex C
U2 snRNP components
109540009
DNA replication proteins [BR:
dpa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
109540009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109540009
NCBI-ProteinID:
XP_019763691
UniProt:
N6TBK7
LinkDB
All DBs
Position
Unknown
AA seq
138 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQLTQITVTYRDGRVAQLEN
VYIRGSKIRFLILPDMLKNAPMFKKQTKAGVAGRGKSGILRAQVARGRGRGGPPTRGRGG
APWQNQGQMGTGSGGRGR
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcggtgtgcccattaaagttctccatgaggccgaaggccacatagtgacgtgc
gagacaataaccggcgaagtctacagaggaaaactcatcgaagctgaggataacatgaat
tgccaattaactcagattactgtaacctatcgggatgggcgggtggcccagttggagaac
gtctacattcgcggctcaaaaatccgctttctcatactgcccgacatgctgaagaacgcc
cccatgttcaagaagcagacaaaagcaggggtggcaggaaggggcaagtctggcatactc
agggctcaagttgcgaggggcagagggagaggcgggcctcctactcggggccgaggaggg
gccccgtggcaaaatcagggccagatgggcacaggctctggcggcaggggccgataa
DBGET
integrated database retrieval system
