Dendroctonus ponderosae (mountain pine beetle): 109540027
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Entry
109540027 CDS
T04899
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04120
Ubiquitin mediated proteolysis
dpa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109540027
04120 Ubiquitin mediated proteolysis
109540027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpa04121
]
109540027
Enzymes [BR:
dpa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109540027
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109540027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf_RING_Vps8_fungal
zf-HC5HC2H
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
zf-HC5HC2H_2
zf-RING_Vps41
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
109540027
NCBI-ProteinID:
XP_019763763
UniProt:
N6TSX5
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MKFIGISFVSFSLTAVVLANAYYQKKQFYPSVVYITKSNPSMAVMYIQAFIGVWILGKLM
RKVFFGQLRTTEFEHLMERSWYAITETCLAFTVFRDDFTPKFVALFTLLLFLKSFHWLAE
DRVDFMERSPMIGWLFHIRVLSLLLLLGALDSHFIIHAFHSTITKGASVQLVFGFEYAVL
ITVVVNIGIKYALHSVDLHSETPWDNKAVFLLYTELVMGFIKVILYVAFVAIMVRIYTLP
LFAFRPMYYTIRDFKKAFSDVILSRRAIHNMNTLYPDATPEELLATDNVCIICREEMATA
CKKLPCNHIFHTSCLRSWFQRQQTCPTCRLNILRAPTPPTNNNVQGAQPPNAPLPPNGPN
QFFNMFAAPNQFFNNQVNPGVNVGAVPPPNAQAPGAEPAPAFGPGPAQPGAVPPPPPAAF
AAPFGFPTHAFPIPFPMPFMAPPPMPPTNLAALSEEELRNLEGHERRHVEARIQCLRNIQ
TLLDAAVQMMQQYSVASSVSSVGREPPASGSAPPAGNGGSSSDSVPNNPSAAANENAGET
PSADQPPEDSASGETASVLPEKSPKSNNSDLLSEASSTSAEEEIRRRRLQRFLLQEQEQQ
QN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatcggtatatcgtttgtgagtttcagcttaacggccgtagttctcgccaat
gcatattatcagaaaaagcagttctacccttcggtggtttatatcaccaaatctaatcct
agtatggctgtcatgtacatacaagcctttattggggtttggatattgggaaagctgatg
agaaaagtcttttttggacagttgcgaactacggagtttgagcacctgatggaacgctct
tggtatgcgataactgaaacctgtctagccttcacagtgtttagagacgatttcacccca
aagtttgtggcgcttttcaccctgctactgtttctcaagtctttccattggctagctgaa
gacagagtggactttatggaacgaagtccaatgattggctggctgtttcacatcagggtc
ctcagcttgctgctactgttgggcgctttggactcccactttataattcacgctttccat
tcgacaattaccaaaggagcttcagttcaattggtgtttggatttgaatacgcagtgttg
atcactgtggttgttaatattggtattaagtatgccctacattcagtggatctgcacagt
gaaactccttgggataacaaagcggttttcttgctctacacagagctagtgatgggattt
atcaaagttatcctttatgtggcttttgttgccattatggtgcgaatttatactttgccg
ttgttcgcgttcaggcccatgtactacacgattagggactttaagaaggcatttagcgat
gtgattttgtcgaggcgagccatccacaacatgaacactctgtatccggacgctactccc
gaagaattgctggccactgataacgtttgcattatttgccgagaagagatggcaacggcc
tgcaaaaagctgccttgcaaccatatttttcacacttcgtgtcttcgatcctggtttcaa
aggcagcaaacttgcccaacatgtcgtttgaatattctacgcgctccgacaccgccaacg
aataataacgttcaaggggcgcagcctccaaatgcgcctctgccgcccaacggccccaat
cagttcttcaatatgttcgccgcgccgaatcagtttttcaataatcaggttaatccgggc
gtaaatgtgggggctgtgccaccgccaaatgcacaagcgcccggagctgaaccagcccca
gcttttggccctggcccggctcaacctggcgcagtgccgcctcctcctccggctgctttc
gccgccccattcggctttccaacgcatgcattccccattccatttcccatgccttttatg
gctcctccccctatgccgcccactaatttagccgccctttccgaggaagagttgaggaac
ttggagggccacgagcggcggcacgttgaggctcgcattcagtgtttgaggaacattcag
actctgctagatgcagctgttcaaatgatgcagcaatacagtgttgcatctagtgtttct
tcggtggggcgcgaacctccggcttcaggctcagctccacctgctggtaatgggggtagt
agttcggattcagtgcccaacaacccttcggctgcagccaatgaaaatgcaggagagaca
cctagcgccgatcaaccgcctgaagattcagcgagtggtgagactgcatcagttctccca
gaaaaaagtcccaagagtaacaattctgacttgctgagtgaagcgagctctacgtccgcg
gaagaggagatcagaagaagaaggttgcagcggtttttactacaagagcaggagcaacag
cagaattga
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integrated database retrieval system
