Dendroctonus ponderosae (mountain pine beetle): 109540252
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Entry
109540252 CDS
T04899
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109540252
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
109540252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
109540252
NCBI-ProteinID:
XP_019764099
UniProt:
A0AAR5PSW1
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All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MDQTNEHSEALSEQNSSTDGQQLSNEQRQLEVNKTSCTSALEVKDDIKIADDECEMNYSL
NQCALNENACGFETAASLGLTKQKVTKSNIIGDEQKTEGSQQLENPDQVVINRKSEALHG
LTAYGGASDSDGSDVDISSKDGNELSPDNNKTKSEQAWRNNEKEDDSDTCDSDSDSTNST
LSSDSESDSDSESDYGDEKLNSSCIEKATIEIASRNEIKTVSLVGDTGAVKRTNKQAATE
EFFPPIPDLSKININEEEEFIHLGELQAIVGTLVTIESIPDRPAFDLDSMLFIGDSQKRP
LGPIFDVLGPVLQPIYCVRFNTEDEIKACGIMPGIKVYAAPKSDEFSKFVFLTDLLKIKG
TDASGCYDQEQPGEISDDEQEFQTNGAKHPRGKRKSIDNSAERHKMYEKTMNQCNTFNTK
VHNLVDVRKKSVRTRRPNATATIQSHIVPEFNPAVPPPGYALHSSFGFNGQPQLEVPVRF
HTGASQNFQANYAPVFSGSPQFGSFDPNTPSPYLGGLPLTWPNCQNSSGIQFNQGPENLQ
SQYNYFTNNSRNSNGTDPGPSSQF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggatcagactaatgaacattctgaagctttatcggagcaaaacagctcgacggacggc
cagcaattgagtaatgagcagcgtcaattagaggttaataaaacctcatgtacttcggcc
ctagaagtaaaagatgacattaagattgcagacgatgaatgtgaaatgaattattcactt
aatcaatgtgctttaaatgaaaatgcatgcggatttgaaacagctgcatcactagggtta
actaagcaaaaagtaacaaagtcgaatataataggagatgaacaaaagactgaaggctcc
caacaattagaaaatcccgatcaagttgtgattaacaggaaatcagaagctttgcacgga
ctaacagcgtatgggggtgccagcgatagtgatggcagtgacgtagacattagcagcaaa
gatgggaatgagctcagccctgacaataataaaacaaagtctgaacaagcttggagaaat
aatgagaaagaagatgactctgatacatgtgattctgatagtgactcaactaacagcacg
ttatcctcagactctgagagtgatagcgatagtgaaagcgattatggtgatgaaaagctt
aatagttcttgtatagaaaaggcgacaatcgaaatcgcttccaggaatgaaatcaagaca
gtttcccttgttggtgatacaggtgctgttaaaaggaccaacaaacaagctgcaactgaa
gaatttttccctcccattcctgatttgtctaaaataaatataaatgaggaggaggaattt
atacatcttggagaattgcaagcgattgttggaactttagttactattgaatcgattcct
gataggcctgcttttgatttggactcgatgttgttcattggtgatagtcaaaaaaggcca
cttggtccaatattcgatgtcttgggacccgtacttcaacccatttactgtgttcgtttc
aatactgaagatgaaataaaagcatgcggaattatgcctggaatcaaagtttatgccgca
ccgaagagtgatgaatttagcaagtttgtgtttcttacggaccttttgaaaataaaaggc
acggatgcctctgggtgttatgatcaagagcagcctggggaaatatctgatgatgaacag
gaattccaaaccaacggagcaaaacacccacggggaaaaaggaaatcgattgataatagt
gcagagagacataaaatgtatgaaaaaactatgaatcagtgtaatacatttaatacgaaa
gtccacaatttagtggatgttcggaagaaatcagtgagaacaagaagaccaaatgcaaca
gcgactattcaatctcatatagttcctgagttcaatcctgcagttccaccaccaggctac
gcactacattccagttttggattcaatgggcaaccgcaactcgaagttcctgtaagattt
cacacaggagcaagtcagaattttcaagcaaattatgcgccagtattcagcgggtcacca
caatttggtagctttgatcccaacacaccatctccctatttggggggcctaccattaaca
tggccgaattgtcagaacagctcaggtattcaattcaaccaaggtccagagaaccttcaa
agccaatataactactttaccaacaacagccgaaactcaaatggtacagaccctggtcct
tcctctcagttctaa
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