Dendroctonus ponderosae (mountain pine beetle): 109540285
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Entry
109540285 CDS
T04899
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109540285
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
Yop-YscD_cpl
PDZ_2
RA_3
Motif
Other DBs
NCBI-GeneID:
109540285
NCBI-ProteinID:
XP_048521193
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MIDSTSSDRRALEREALRNVINQWNANRLDLFELSEPNEDLEFHGVMRFYFQDSGQKVAT
KCIRVASDATVEDVIGTLVEKFRPDMRMLSIPSYALYELHEGCAERKMSPDEKPLLVQLN
WHVDDREGRFLLKNVDDKTIGSMGSLDTNASFRRKLSKREKKQLKKQEKLSRIKCENGDV
NDGKDNVTEKLYHELPETSFTRSISNPEAVMRRRRQQKLEKKLQQFRSKDGGPDTGGTLK
IYGEALCKDVPYKTLLLSVRDCAGAVVREMLDKYGLTKVDPSQFCLVQVTQQPGIPDTEY
VLDDDECPLSILMTAPNTGSIMFHVRRRPADCAPRKRKKKPLSGVRGDQRGDVPFLMELG
PDGQAPHPADANKTVRLVNDVMEVGSANGIALQLYGPHIQPRHCVITNAEGVTSLTPCHA
DAHTYVNGQRIHQTTILTNGSLVKFGNSNTYRFVDPAQEDRIRHPLGSIDNQTRIYESRS
PRALSPTQGTGSRENIETTFDIDGNVETVSTHSGAREDNRSLGSDSRSENRLSGMERYAR
GQDPILPAVLEFPEDPQEQFLARVITHLDVTTPTFRLAPAYTLYLCARYRASTHYRPELT
PTERAHKLTLVLQHAAMLIRHTVQDRSTESTSQAFWLANASELLHFLKSDRHVNPFSLQA
QDTLADAVQLAFKNLVACLTDELNSGMAYLMSVTGDDHPREVINILSGAMNLLRKCRVNA
ALTIQLFSQLFHWISAKALTNVISNSNLCTRNFGNKLANRLRNLQAWAESQGLELAAECH
LAKIVQCAHLLQANKYTPEDLANLSAACFKLNSMQLGALLMQYKAEPGEKIASPSLVEQA
AKAAESVADELARAEGREVTLYEDPAPPLQLLLPDDGFSCDVVQGVPPGLADFLHPLKAA
GLCRLAAQPTSSGHWTVYMKAPRPPSALSTTQPEVQVIRLHKAGGGMGLSIVAAKGAGQE
RLGIYIKSVVPGGAADRDGRLAAGDQLVSVDGQSLLGITQEKAAEFLVRTGSVVTLEVAK
GGAVYHGLATLLQQPSPTPHRGPRRMSERDLPTRVDSERTIPSSKSVPALHQIHSTTQEQ
QRASGSQPNNFLADGYSRTSSNNSINTNNPPTGLSNGPIGPTAVRSRSTHNLNQQDGGFY
QNLSVYRNKEPSPQQLGDRTSALRSSQNSLQSSITSPPNSQRPSSAYYPTNQAQPNFNRP
NLHQSIPNLKSPPSMQRLQQEDNGRLSGSYPNVGGPGQQQYYGHQLPQSQQQQPYIRQPA
QPAYPGAVDDPLNRQQYNSSYANSSQPYPSPTHSNSTNYSAMNNGTNNYSQANSAQQHAM
YNSSLNSAGPSNGQKFEERVDPRIDQRGYATPNTGLLREDLLRQSHNTRHDEIMRYPSTN
NVRISEAQIQNSRGSEDLNRHQEIRNSRSEDALKQPALRGEMLRYASSGNIRAHDINQPL
RPGQDQQHRLSGEERLMRGQAKLTEMGEELKRRQQHQQQPSQPRVLTQMPPNAYYQQQQQ
QQHYYNNQMAQSMQNLSINPTYQNQQPLPAGYNQNYAVNQGFYQTYGPNSPTYRPQNNSQ
KPAKRPESPPVPPPTNTHPLYSPTSPEAPTTYTASNQDPPKMALYPMSPTTNSKPPRDPW
AREEQERQQEARREVSRQWQEQQIRELMTLPYRTQQQEEQLRVLQLEREFQRRAQEAAGE
DDDETEKESPTPHMPQPVSSQTVISTVPSTTVSSRQEQTQPPPASILKPGGNNSQVSPSA
QSNVISRESHATNQRPPSPAEPILAPPPPERGSSFAVMSMRGKDSKRVSFDPVSTQNNIQ
QQSPIPTSLPVKENAREDPNSFILQAESMLASPTTPTDPSLNVATATPGVIGAQEVYRDP
RARRLAEQQKKSQNETTPVPEKLSFKEKMKMFAMETGEQETPKDKSKISRAQREIDNLGS
PPPNSGMVH
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagcacatccagcgatcgcagggccctcgagagagaggccctgcgaaatgtc
atcaaccaatggaacgccaacagacttgacttgtttgagctgtccgaacccaatgaggat
ctagagtttcacggtgtaatgcgattctacttccaagactccggacaaaaagtggcaacc
aaatgtattcgggtagctagcgacgccacagtagaagacgtgatcggtacccttgtagaa
aaattccgtccagatatgaggatgttgagcatacccagctatgcattatatgaattgcat
gaagggtgtgctgagcggaaaatgtcgcccgatgagaagcctttactagttcaactcaac
tggcacgttgatgaccgggaaggaagatttttgttgaagaatgttgatgacaaaacgatt
ggctcgatgggctctctcgacacaaatgcaagttttcgaaggaaattgtcaaagagggag
aaaaaacagttaaaaaaacaagagaagctctcgcgaataaaatgtgaaaacggtgacgtc
aatgatggaaaggataatgtaacggaaaaattataccacgaactccctgaaacgtcattt
acaaggtctatatctaatccagaggctgtgatgaggcgaaggcgtcaacaaaaattggaa
aagaaattgcaacaattccgatcaaaagacggcggtcctgacacgggtggaaccttgaaa
atatatggagaagctctttgtaaagacgtaccatataaaacattactcttgtcagttaga
gattgtgcgggggcagtagttagagagatgctggataaatatgggctaacgaaagtggat
ccgtcccagttttgtttagtacaagttacacagcagcctggcataccagacacggaatat
gttcttgatgatgacgaatgccctcttagtattctcatgacagctcctaacacagggtcc
ataatgttccacgtacggagacgaccagcagattgtgcgccacgtaaacgaaagaaaaag
cctcttagtggggtcaggggagaccaacggggcgatgtcccttttcttatggaattgggg
ccagatggacaggcgccgcaccctgctgatgcaaataagacagttcgattggttaacgat
gtaatggaggttggttcagctaatggaatagcacttcaactgtatggtccccacatccag
ccacgccactgcgttatcacgaatgctgaaggagttacctcactcactccttgtcatgct
gatgctcacacctacgtcaatggacagagaatccatcaaactacgatactgaccaatggt
agcttagtgaaatttggaaatagcaacacgtacaggtttgtagaccctgctcaggaagac
agaatccgacatcctcttggaagtattgataaccagacacgaatatatgaaagccgatca
cctcgcgctctcagtccaacacaaggcacaggttctagagaaaacatagagaccactttt
gatatagatggcaatgtggagacagtgtccactcatagtggcgctagggaggacaatcga
tctttaggatctgatagtcgatccgagaatagactaagtggaatggagcgatacgcaaga
ggtcaagacccaattttgccagccgtcttagaattccccgaagatccacaagaacaattt
ttggccagagtgataactcacttagatgtaacaacgcctacttttagactggcacccgca
tatactttgtatttatgtgctagataccgagcatcgactcattatagaccagaactgaca
cctacagagcgagcccataaattaacattagtcctgcagcatgctgctatgttaattcga
cacactgtccaggacagaagtactgagagcacgtcgcaggcattttggttggccaacgcc
agcgaattgctacattttctaaaaagcgaccggcatgtcaacccgttttccttgcaagct
caggacacgttggctgatgcagttcagttggcttttaagaatttagttgcttgtttaact
gacgaactaaattcaggaatggcgtacctaatgtcggtgacaggagatgaccatccaagg
gaagtaatcaacattcttagtggagccatgaatttattaagaaagtgcagagtaaacgct
gctttaactatccagttattctcccaactattccactggatctcggccaaggctttgacg
aacgtaatttcgaatagcaatctatgcactagaaattttggaaacaaactggctaaccgt
ctacgaaaccttcaagcctgggcagaatctcaaggcctggagttagctgctgagtgccat
ctagctaagattgttcagtgcgctcatcttttgcaagcgaacaaatacactcccgaagat
ttggctaatctgagtgctgcctgttttaaattgaactccatgcaactcggagctttactt
atgcaatacaaagctgaacctggtgaaaaaatcgcttctccatctcttgtggaacaagct
gccaaagctgcagagagtgtggcggatgaactggcgcgcgctgagggtcgcgaggttact
ttatatgaagatcctgctcctcctttgcaacttcttttacctgatgatggatttagctgt
gatgttgtgcaaggggtcccaccaggcctggctgattttctgcatccgctgaaagctgca
ggactttgcagattagccgcgcaaccaacgagttctggccattggacggtttacatgaaa
gctccaagacctcccagtgctctaagtactactcaacctgaggttcaagttattcgcctt
cacaaagctggaggtgggatgggtctatctatagtggctgcaaaaggagctggccaagag
cgtttagggatctatattaaatcggtagtaccaggaggtgctgctgatcgagatggccga
ctggcggcaggtgatcaacttgtatcagtagatggtcaatctctcttgggaataacccaa
gaaaaagctgcagaattcctagttagaacgggcagcgttgtaacgttggaagtggcgaaa
gggggcgcagtttatcacggtttggccacattacttcaacaacctagtcctacgccacac
agaggccccaggcgaatgtctgaacgtgacttgcctactcgagttgactctgagcgcact
attccctcatccaaatccgttcctgcattgcaccagattcattcgaccacacaggagcaa
caaagggcctctggtagtcaaccaaataatttcttagctgatgggtatagtagaacatct
tcgaataatagtataaacactaacaacccgcccactggactttcaaacggcccgatcggt
ccaacagccgtacgaagtcgctccactcacaatttgaaccaacaggatggaggattttat
cagaatcttagtgtttataggaataaagagcccagtcctcagcaactaggtgacaggact
tctgcccttcgttcctcccagaattcgttacaatcatctataacgtcccctccgaattcc
cagcgcccttcttcggcatactatcccaccaatcaagcgcagcccaactttaatcgccct
aatctccaccaatcgataccaaatttgaaaagtccaccttccatgcagcgactgcaacaa
gaagataacggccgactcagtggcagttatcccaatgttggcggcccaggacaacaacaa
tattatggacaccaactacctcaatcacaacaacagcagccttatattcgacaaccggct
caaccagcttatccaggcgctgtcgatgacccactaaatcgacagcaatataactcgtca
tatgcgaactcaagccagccatatccatcgccaacgcacagcaacagcacaaactattca
gccatgaataatggaactaacaactattctcaagcaaatagtgcacaacaacatgccatg
tacaattcgagcttgaacagtgctggtcctagcaacgggcagaaatttgaagaaagggtg
gatccccggattgaccaaagaggatatgcaacaccaaataccggcttgttaagagaagat
ctattgcgtcagtcccataacacgcgacatgatgagataatgcgatacccaagcactaac
aacgttcgcatttcagaggcacagatacaaaacagcagaggcagtgaagatctcaatagg
caccaagaaattcgaaattccagaagtgaagatgcgcttaaacaacctgctcttcggggt
gaaatgctgcgctatgctagcagtggcaatatacgggcacacgatataaatcaaccttta
cggcccggtcaagatcagcagcaccgcttaagtggcgaggagaggctaatgcgaggccaa
gcaaaattaacggaaatgggtgaagagctaaagaggagacagcaacaccaacaacaacca
tctcaacctcgggtgttaacccaaatgccccccaatgcatactatcagcagcaacaacag
cagcagcactactacaacaaccagatggcacaatccatgcaaaacctctcaataaaccca
acctaccaaaaccagcaaccgttacctgctggttacaaccaaaactacgcagtgaaccag
ggcttctatcaaacatacggacccaattctccaacctatcggcctcaaaataattctcaa
aagccagcgaaaaggccagaatcgcctccagttcctccacctaccaatacgcatccatta
tattctccgacttcaccggaagctcccaccacatacacagcttctaatcaagacccgcca
aaaatggcattgtatccgatgtctccaactaccaacagcaaacctccaagagatccgtgg
gcgcgagaagaacaagaacgacaacaagaagcaagacgagaagtctcacggcaatggcag
gaacagcaaataagggaattgatgactttaccttatcggacgcaacaacaggaggagcag
ctcagggtgctacaattagaaagggaattccaaagacgcgctcaagaagcagctggagag
gacgacgatgagaccgaaaaggagtctccaacgcctcacatgcctcaacctgtctccagt
cagaccgtgataagtacagtgccttctacgacagtttccagtagacaggagcaaacacag
cctcctccggcttcaattttgaaaccaggaggaaacaattcacaagtttcgccttcggct
caaagcaatgttatctcgagggaaagtcatgccaccaatcagcgaccaccttcacctgct
gaacccattctggcccctcctcctccagagaggggctctagttttgctgttatgtcgatg
cgcggaaaagattcgaaacgcgtgtcatttgatccagtgtcgactcaaaataatattcaa
caacaatcgcccataccgacttctttaccagtgaaagagaatgcaagggaggatccaaat
agcttcattcttcaggcagaatctatgctggcttcccccacgaccccgacggatcccagt
ctgaacgttgcaaccgcaacaccgggcgtaatcggtgcccaagaagtgtatagagatccc
agagctagacgattagccgaacaacagaagaaaagccagaatgaaacaaccccagtgcca
gaaaaattgagttttaaagagaaaatgaaaatgtttgcaatggaaaccggtgaacaagag
acgccgaaagacaaaagcaaaattagtagggcgcaaagggaaattgataatctcggatcg
ccgccgcctaactcgggaatggtgcactaa
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integrated database retrieval system
