Dendroctonus ponderosae (mountain pine beetle): 109540292
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Entry
109540292 CDS
T04899
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109540292
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
90S particles
Other 90S particles
109540292
Pre-60S particles
Other pre-60S particles
109540292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
TPR_IPO5
DUF4835
Motif
Other DBs
NCBI-GeneID:
109540292
NCBI-ProteinID:
XP_019764215
UniProt:
N6URZ0
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MGKFRSKLKGQSKGKRWPKGQSASSNPVTRKYRDEAKSRFFQVETGPSKLTSASLMKHDA
LQLYKSGDKDVEMPDMESESSYSGASGSYQSMQSFASDWSECSNMSFNKFLRTFQANSAL
HKEMLAILAAITDVIKMNGGTESSTEYYCSLLTTLDTLYNAEEKKEEQVTAVLALLNMGI
KTVPEAVLKKTFSDVTMKMLHVLQDYSSADNNAIIKALLGILATVLRAQELALWNFESTK
QVFAALLNPFCIHSKPKWRKAAQHAVAAIVKSPCFEASPNHNPAADKCADFCQEILANCT
GGDVNAIKSRQTTILHTLGLLKETIQTFSTSNIKKCCETILRLMTLNYPIVTSSGLQVLH
SLFAAQNSVVSSDLNGKLIAALYEYQPSNTDIQPTLAWLLVMQEAHVHLADVDLPVSVSL
LPAFFNNVVQMWLCGKTEVISGATHCLEVLLKDAIRPACESEQAAQQHRSKLEQCFNTIS
GCLSYQYNAAWSQVLHVIGVMCEVGGANCSDLLEETLCSLAELRDSYKFSFNSEVEYAMG
AAIRSMGPEKVLAVVPLRRENGELNMERSWLLPVLKENINGANLSFFRDGILPLANFCQQ
RAAQLAQVNNGIGAHSSELLYMQLWNLLPCFCNQPGDIQSEFKSVAKLLGMAVSDRKELR
LAVMAGLRKLILSAKKSENSADLAELGRFDKNYLPILFNIYTIKPIGSDEEGQRLAALET
IKLYLTISRPELNQQLFSNALERLNASSDEPEDHFIKESILDLIKTLIPYQGADSIAIIY
EQCVKNLPAIKNNKEQKKAYRILEEIVSSESEGCKQFVRANRKDVQRLLGKSLNTAATSS
KGARLRCFNHLIKAQPQLDQDSKLIRSVVPEAILCCKDINEKCRQIAFELINTVGETLMG
HDQMQQFVLLMTAGLAGSPPMISCSILALASVLHNFTGALGQDNIRLILDNVATLSSCPA
REIVTSCLSFVKVYCSALPSLMVQASLDTVMRALTGMTEDCQRHFRLKVRDLLDRLVRKY
GADSLTPFVAPTDETMLKRIRNLRKLNDRKNRKRKQAKEASREEEEAASLEDFLVKAKPK
SIEEILADSDSELEGEEGAHSAQKSKKPAGAWIEEDAETIIDFTDAAVARKVRATKPRKA
AGAQAAPAPDKNRGFKTAADGRLLIKDDHLDSDDDHKPXINQNSDSSDSEEEASSVAQAL
QVAGRKRKRAMSVKSGFSYQTGGVGIHRPLHAAASVKSGVSTGGEYKSRKAAGDVKRKGQ
FDPYAYLPLQRSALNRRKRAKGIGQLASVVKGAKSGALKGAKAKKHRKNTL
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaattccgcagcaaactaaagggccaaagcaaaggcaaaagatggccaaagggg
cagagcgccagctcaaacccggtgaccagaaagtatcgcgatgaagccaagagccggttt
ttccaggtggaaactggccccagcaagctcacatccgcgtcgctgatgaagcacgatgct
ttgcaactgtacaaatcaggagataaagacgtggaaatgccggacatggagtctgagagc
agctacagcggagcctccggctcctaccaatccatgcagtcgtttgcctccgattggtcc
gagtgcagcaacatgtcgttcaacaagttcttgagaactttccaggccaattccgccctg
cataaggagatgctggccattctggccgcaatcaccgacgtgattaagatgaacgggggc
acggagtcctccacagagtactactgctcgcttctaaccaccctggacaccctgtacaac
gccgaggagaagaaggaagagcaagtgactgcagtgctcgccctgctcaacatgggcatc
aaaacagtgcccgaggcagtgctgaagaagaccttcagcgacgtaaccatgaagatgctg
cacgtgctgcaggattattcctcggcggacaacaacgccatcatcaaggccctgctgggc
attctggccactgtgctgagggcgcaggagttggcgctgtggaacttcgaatcgaccaag
caagttttcgccgctctgctgaacccattctgcatccacagcaagcccaagtggcgcaaa
gccgcccagcacgcagtggccgccattgtgaagtcgccctgcttcgaagcgtcgcccaac
cacaatcctgcggccgataaatgtgcggatttctgccaggagattttggcgaactgcacg
ggcggcgacgtgaacgccatcaagtccaggcaaacgaccatcttgcatactctcggcctg
ctgaaggagaccatccagaccttttcgacgagcaacatcaagaaatgctgcgaaaccatc
ctgcggctgatgacgctcaattacccgatagtgacttcgtctgggctgcaggttttgcac
tcgcttttcgcagcccagaactctgtcgtgtccagcgacttgaatgggaagctgatcgct
gccctgtacgagtaccagcccagcaatacggatattcagccgacgctggcttggttgctg
gtcatgcaggaggctcatgtgcatctggccgacgttgatctgcccgtgtccgtctccctg
ctgccggctttcttcaataatgtggtgcaaatgtggctctgcgggaaaactgaggtcatc
agtggggccactcattgtttggaggttctactcaaagatgccatccgtccggcctgcgag
tccgagcaggcggcgcagcagcatcgctccaagctggaacagtgcttcaacacgatcagc
ggctgcttgagctaccaatacaacgcggcctggagccaagtgctgcatgtgattggcgtg
atgtgcgaagtgggtggagccaattgcagcgatctgctggaggagacgttgtgcagtctg
gccgagctgcgcgactcgtacaagttcagcttcaacagcgaagtggagtacgcaatgggc
gcagccattcgctcgatgggccccgaaaaggtgctggcggtggtgccgttgcgacgagaa
aacggcgaactgaacatggaacgctcctggctgcttccggtgctcaaagaaaacatcaat
ggggcgaatctgagcttcttcagggatggaattctgcccctggccaacttctgccagcag
agggctgcccaattggcccaagtgaataacgggattggggcgcacagcagcgagctgctg
tacatgcagctctggaatttgttgccgtgcttctgcaatcagcccggcgatatacagagc
gagtttaaaagtgtggccaagcttttgggcatggccgtgtccgatcgcaaagagctgcgt
ctcgccgtgatggcgggccttcgcaagctgatcctcagtgcgaaaaaatcagaaaactca
gccgatctggccgagttggggcgcttcgacaagaactacctgcccatcctattcaacatc
tacacaataaaaccgatcggctccgatgaggagggccagcgattggccgcattggaaacc
atcaagctctacctgacgatctcccggcccgaactcaatcagcagctgttcagcaacgct
ttggagcgactgaacgcgtccagcgacgagccagaagaccacttcatcaaggagtccatc
ctggatctgatcaagacgctgatcccctaccaaggcgccgacagcatcgccatcatctac
gagcagtgcgtgaagaacctgccggccatcaagaacaacaaggagcagaagaaggcctat
cggatcctagaggagatcgtgtccagcgaatcagagggctgcaagcagttcgtcagagcc
aatcgcaaggacgtgcagcgcctgctgggcaagagcttgaacacagcggccacgtccagc
aagggcgcccgactgcgctgcttcaaccacttgatcaaggcgcagccccagctggaccaa
gacagcaagctgatcagaagcgtcgtgcccgaggccatcctctgctgcaaggacatcaac
gaaaagtgccggcagatcgccttcgagctcatcaacacggtgggcgaaaccctcatgggg
cacgaccagatgcagcagttcgtcctgctgatgacggcaggcctagcgggcagcccgccg
atgatctcctgcagcatcctggccctggcctccgtgctccacaacttcaccggcgctttg
ggccaggacaacatccggctgatcctggacaacgtcgccaccctgtccagctgtcccgca
agggagatcgtcacctcctgcctgagcttcgtgaaggtttactgcagcgctttgccctcc
ctgatggtgcaggcctcgctggacaccgtcatgagggccctcacggggatgaccgaagac
tgccagcgccacttccggctgaaagtgcgcgacctcctggacagactcgtccggaagtac
ggcgccgacagcctcacgccgtttgtggcgccgacggacgaaaccatgctgaagcgcatc
cggaacctgcggaagctgaacgacaggaagaaccgcaagcggaagcaggcgaaagaggcc
agccgcgaggaggaggaggcggccagcttggaggacttcctggtcaaggccaagcccaag
agcatcgaggagatcctggccgacagcgactcggagctggagggggaggaaggggcgcac
agcgcccaaaagtccaagaagccagcgggcgcgtggatcgaggaggacgccgagacgata
atcgacttcaccgacgccgcagtggcaagaaaagtgcgcgccaccaagccgaggaaggcg
gcgggcgcgcaggcggcgcccgccccggacaagaaccgcggcttcaaaacagccgccgac
gggcggctgctcatcaaggacgaccacctggacagcgacgacgaccacaaaccccmratc
aaccaaaactcggacagctcggacagtgaggaggaggcgagcagcgtcgcccaggccttg
caagtggccgggcggaagcggaagcgcgccatgtcggtgaagagcggcttcagctaccag
acgggcggcgtgggaatccaccggccgctccacgccgccgcctccgtgaagagcggcgtt
tcgacgggcggcgagtacaagagcaggaaggcggcgggcgacgtgaagcgaaaggggcag
ttcgatccgtacgcctacttgccgctgcagcgaagcgcgctcaaccgcaggaagagggcg
aagggcatcggccagctggccagcgtggtcaagggcgcgaagagcggcgctctgaagggc
gccaaggccaaaaagcaccggaaaaacaccctctag
DBGET
integrated database retrieval system
