Dendroctonus ponderosae (mountain pine beetle): 109540303
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Entry
109540303 CDS
T04899
Name
(RefSeq) BRCA1-associated protein isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpa04121
]
109540303
Enzymes [BR:
dpa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109540303
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109540303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
Prok-RING_4
TerY_C
zf-RING_10
zf-rbx1
FYVE
MBF1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109540303
NCBI-ProteinID:
XP_048524691
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MFLRTNSAQLLSANVMSRRGRKTKRAANYVDDPDSSDEFDAFMVSSLLSIFASHRAPRTK
KPTTNKRKPSCQCDDQNCRSKANKQAASRSTSSVQSKSRQRNGKNTETKSTTAAPSTTID
LDSDNEAPNAAQTKTYEASIHNKIDNVFKALESSDEGLSEEETRKKKACVTSSSEPKPKD
FYTILSDSEGEDEKRTLDNSNFKVSFVTYGPQNEQLLSSTSSTNISNATDNSLTVKPKKN
ATDLLSYVDDILNECDVIDLDHSNKSSSILRYIFSLDDLKKNANAILNDVTSYAEVLQPK
EPEAKKPDTPVKEVPTCPICLENLGGSRQAMATLCGHIFCRQCLNQVMKTTKKCPSCRVK
LNKAKYHAIYI
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgttcctccgcacaaattcagcgcaactcttgtcagcgaacgtaatgtctagacgtggc
cgaaaaaccaaacgtgcagcaaattatgtagatgatcctgattcatccgatgaatttgat
gcttttatggtatccagtctattaagtatatttgcctctcatagagcacctagaacaaaa
aagccgaccaccaacaaaagaaaaccgtcctgtcaatgtgatgatcaaaattgtcgctca
aaggccaataaacaagctgcaagcagaagtacgagctcagttcaaagcaagtctagacaa
aggaatggaaaaaatactgaaaccaaatcaacaacagcagctccatccactactatagat
ttggattccgataatgaggctccaaacgctgctcaaacaaaaacgtatgaggccagtatt
cacaataagatcgataatgttttcaaggcactagagtcaagcgatgaaggtttgtccgag
gaggaaacgcgtaaaaagaaagcgtgtgtcaccagttcatcggagccaaagcccaaagac
ttttatacgattttatcagattcagaaggcgaagacgaaaaacgcacattggataattct
aattttaaggtttcgtttgttacttatggaccacagaatgaacagttgctttcaagcaca
agctccacgaacatatcaaatgctactgataatagcttgactgtaaaacctaaaaagaat
gcaaccgatcttctatcatatgtggacgatattttaaatgaatgcgatgttatagatctt
gaccactccaataaatcatcgtccattttaaggtacatattcagtttagacgacttaaag
aagaatgcaaatgcaattttgaatgacgttacatcatatgcagaagtattgcaaccaaag
gaacctgaggcaaagaaaccagatactccggttaaggaggtgcccacttgccctatatgt
ctcgaaaatttagggggtagtagacaggcaatggcaacactttgtggtcatatattctgc
aggcagtgtttaaaccaagtaatgaaaacgacaaagaaatgtccatcatgtcgtgtgaaa
ctcaacaaagccaagtaccatgcaatttacatatag
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