Dendroctonus ponderosae (mountain pine beetle): 109540405
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Entry
109540405 CDS
T04899
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109540405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109540405
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109540405
mRNA degradation factors
5'-3' decay
Decapping complex
109540405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
DUF3417
DUF1627
Motif
Other DBs
NCBI-GeneID:
109540405
NCBI-ProteinID:
XP_019764326
UniProt:
A0AAR5PU34
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MSSTGFSSSQSIVQNIKYTGPESEYATELHGQVVNIQCSEGSHNHGSSKVKLTDRIDYNW
EFKYYHGHLVAAHIKGKIAAYAMKGKEGGMVRVVHQENHAKRALIRNLKDDIKELAFAYS
SVEVILGCVDCEGNILIYNIEDSEDSLSYTLLLHVFHKELPRPKTNFRLAWCPYVPSMEE
LDFPEESEKMFVILNGSKAEIYNVATLNLKYGSDGPIDPDNSYEGYTEINHTSDLVDASF
SSDGCAIALACKDGFVKFFQLFMCDPEMQKCLHEWVPHEGKALTSVIFVDNILQYAPHCW
KFAVTGAMENSELKLWSCETWSCLQTINFLPNPKGIIPELFFNVAVDYSGKYLVVSDINN
RGVYVIELQKNEEEQLVCAKQLAHFLIPAPFMSFHILEAATKNIPFCYNNSSEDLYDDSD
TEFDDEAEITVQSLKMLVIQPKKFQECNVTFQPDTLLYKGVIVTENVIDDLVDLTTDKLI
EDEPVVEKMPDLDDLQTSVTLLIQQQSNNTKLTLMTPDDFTSPGKSSKSSSLRNSITNES
VPPEAVEKIIDSVRPDFQRPQKENFASAGSSPSREVQEILSLTNASAAYPTQEYFSNLAS
LQGQNEGEPPQKDYSATSGSAMLYQDSLNWPKISLVKESNPIKQLQDGGNLNKQELETVY
LRMNGMEASLKEQSILMAQLFEHMKSLNQSVVSNSASRSTQNEFADFTKEIESVILKQHL
QVAKMLENVIHLQQGKHRELQESIMNAVGQVFNKTVPEMVTEIVQHEIQFAVLPAMQKLM
ETYWQKLESANCEKIASLGDVVDENLAKIVNSKSFEEKIARSIALQVTPHLEKSYRESIA
QNLVPSWERVCAQMFQQINDTFYRGTKEYTASVEAHVERQRRTQESSKDIIVHLKSASES
LKANADKLTDSMSSQLQAQLLSLFKTVQDKLVVSVKDMVSSEIQKGFNNQVAVIQEGVLN
AVSRSRTVTPAPHVDTHLQTMAHIQQALAKRTFDEAFQLALSAENLNMVIFVCERVDANK
VFGEKCLLSQSVLLALIQQLSMEMHKNSQIKLSYLRPAFLALSPDGASTKQFIPKVLTDL
LKQLTLFMQTNPPLKEMNDARILKMAVESMLSFTDE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaccgggttttcgtcatctcaaagtatagttcaaaacataaaatatacaggc
ccggagagtgaatatgcgacggaactacatggccaagtagtgaatatccaatgcagtgag
ggatcccacaaccatggaagttccaaagtgaaacttacagatcgaatcgactataattgg
gaattcaagtactaccatggtcacttagttgccgcccatattaaaggaaagattgcggcc
tatgcaatgaagggcaaagaaggcggaatggtaagggtagttcaccaggagaaccacgca
aaaagggctttaataaggaacctgaaggacgatattaaggaacttgcatttgcctattcc
agtgttgaggtcattctcggctgcgtagattgcgagggaaatattttaatttataacatc
gaggattcagaagattcgttaagttacacactactcctgcatgtgttccacaaagagttg
cctagaccgaaaaccaatttcaggctagcgtggtgcccttacgttcccagcatggaagaa
cttgattttccggaagagtccgagaaaatgttcgtcattttgaacggttctaaagctgag
atctacaatgtcgccactttgaaccttaaatatggaagtgatggacctattgatcctgat
aattcttatgaaggttacacggaaattaaccatacctcggatctggtcgatgcctcattt
tcgtcggatggttgtgccattgcgcttgcctgcaaagacggattcgtgaaattttttcag
ttgtttatgtgtgatccggagatgcaaaaatgtttacacgaatgggttccccatgaaggt
aaagctttaacttctgtaattttcgtggacaatattctgcaatatgctccgcattgttgg
aaattcgccgtcactggtgcaatggagaacagcgaacttaagttgtggtcttgtgaaact
tggagctgtttgcagaccatcaattttttgccaaacccaaagggaatcataccagaattg
tttttcaacgtggccgtagattattcaggaaaatatctagtggtttccgacatcaataat
cgcggggtctacgtaattgaactgcagaagaatgaagaggagcagctcgtatgcgctaag
caactagcccactttttgattccggcaccttttatgagtttccatattctggaagctgcc
actaagaatattcctttttgttacaataacagttcggaggatctgtatgatgacagcgat
acagagtttgatgatgaagccgaaattacggtgcaaagcttgaaaatgttggttatccag
ccgaagaaattccaggagtgcaacgtcacgttccagccggacacattattgtacaagggt
gtaatagttactgaaaatgttatcgacgacttagtggatttgactactgataaacttatt
gaggatgaaccagtagtggaaaagatgccagatctcgacgatttgcaaacttcagtaact
ttattgattcagcagcagagcaacaataccaagttaaccttgatgacaccggatgatttt
acttcgcctggtaaatcctcgaaatccagcagcttgagaaactcaataacgaacgaatca
gttccaccagaagcagtcgaaaaaatcatcgacagcgtccgcccagacttccaacggcct
caaaaagagaattttgcgagcgctgggtcgagtccgagtagagaagtccaagaaatattg
tccttgaccaatgcttccgcggcgtatcctacccaggagtattttagcaatttagcgagt
ctccaaggacagaacgaaggggagcctccgcaaaaagattactcagccaccagtggcagc
gctatgttgtaccaagattcgctaaattggccgaaaatatctttggtaaaagaatctaat
cccatcaaacaactgcaggacggcggcaacctgaacaagcaggaattagagactgtatat
ctgcggatgaacggcatggaagctagcctcaaggaacaatcaattctgatggctcaactg
ttcgaacatatgaaatctttgaatcagtcggttgtgagtaacagtgcttccagatcgacc
cagaacgagtttgccgatttcactaaggaaatcgaatctgtgatactgaaacagcatcta
caagtcgccaaaatgctcgagaatgtcattcacctgcaacagggcaagcacagggaactg
caggagagtatcatgaatgctgtcggacaagttttcaataagacagtacccgagatggtc
actgaaatcgtacagcacgaaattcagttcgccgtgttgccagcgatgcagaaattaatg
gaaacttactggcagaaattggaatcggctaactgtgaaaagattgccagtctgggagat
gttgtggatgagaatttggccaaaatagtcaactcaaagtcgttcgaagagaaaattgct
cgttccattgccttgcaagtgactccccatttggaaaagtcctaccgagaaagcatcgcg
caaaatctcgttccttcttgggaaagagtctgcgcccaaatgttccaacaaatcaacgac
acgttttacagaggcacaaaagagtatacggcttcagtggaggcgcatgtggagcgacaa
cgtaggacccaagagtccagtaaagatatcatcgttcatctgaaaagcgcttctgaaagc
ctgaaggcgaacgcggataagctgacggattcgatgtcttcacagcttcaagctcaactg
ctctctctttttaagactgttcaagacaagttggtcgtcagtgtcaaagatatggtcagc
agcgagatccaaaagggatttaacaaccaagttgctgttatacaagaaggcgttctaaat
gccgtgagtagatctaggacagtcactcctgctccgcacgtcgatactcatttgcagaca
atggcacatatacagcaggccttagcaaaacgcacgtttgatgaagccttccaattggcg
ctctccgctgaaaacttgaacatggtgatattcgtctgtgaacgtgtcgatgcaaacaaa
gtgtttggggagaaatgtctgctgtcgcaaagtgttttactagcactcattcagcagctc
agcatggaaatgcacaagaattcccagatcaaattaagttacctacgcccagcgttcctg
gcgctctctccggacggagccagcacaaagcaattcattccaaaagtattgacagacttg
ctgaagcaactaactctcttcatgcaaactaatcctcctttgaaagagatgaacgacgcc
cggattttgaagatggccgtagagagtatgctgagtttcactgatgaatga
DBGET
integrated database retrieval system
