Dendroctonus ponderosae (mountain pine beetle): 109540904
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Entry
109540904 CDS
T04899
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109540904
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109540904
Spliceosome [BR:
dpa03041
]
Complex C
Other components
Complex C specific factors
109540904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
Cas3-like_C_2
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
109540904
NCBI-ProteinID:
XP_019764993
UniProt:
N6TXS2
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MEFKATFLKPSDTSSLLDKDNAIDHTSFVYNRFISQSIQTQRQRLPIFKNRNHILYLLEK
FQTLVLVGETGSGKSTQIPQYLFEGEWPLQIGICEPRRTAAISLAQRVADETGTILQRDT
VGYAVRFDCCSSKPKIKYMTEGVLLREMMSDPLLTNYSVIMIDEVHERSLYTDILMGLMK
KVLQKRPELRLIVASATLDASAMQQFFNNNKSDDSKLNTSVIMSVEGRQFSVEIYYVNEP
VPCYIKSAVDVAITINCKEKPGDILIFLTGQEEVDKTVQLLLEYANELEQSKAKLRVMVM
PIYGALPYHQQLKVFKKAPDGHRKIIVATNIAETSLTIPGIVYIIDCGFVKLKWYNMETH
TDTLMILPISKSSADQRAGRAGRMRPGKVFRLYTEEFARNLAAMTPPEMVRSNLTYAVLQ
LKAMGVDNILKFNFPNIPPIENLRSALETLFALDSINIHSELTRPLGFYMAEFALDPLHS
KILLSAADFGCSEEILIIIAMLQVETVFVKPSTGTGNLKARVQKRLFEVAEGDLITYLNI
YQGFIQSELSQGFCHKNYFSYMSLKRVVEIKRMLEKTLANYNIPIVSGNKTTNNLCRCLV
TGFFPNAAYLHRSGVYKTVRGDIELFIHPDSVLYSVPQPQWVVFSELVHKVKLYMRDITV
IHSEWLIELAPHFYYKTTAID
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaagcaacgtttttgaaaccttcagacactagttccttgcttgataaagac
aatgctattgatcatactagtttcgtgtataatagatttatttcccaatcgatccagact
caacgacagcgtttgccaatattcaaaaaccgaaatcacattctctatctcctagaaaag
tttcaaacgctcgttcttgttggtgagacgggtagtggaaaaagtacgcaaattccacaa
tacctatttgaaggtgagtggcctttgcagattggaatttgtgaacctaggagaactgca
gcaatttccttggcccaacgggtagctgatgaaactggcactatattgcaacgagatact
gttggatatgcagttcgtttcgactgttgttccagtaaacccaagatcaaatatatgact
gaaggagtcctgctgagagagatgatgtcagatcctttattaacgaattattctgttata
atgattgatgaagttcacgagcgtagtttatatacagacattctaatggggcttatgaaa
aaagtattacagaaaaggccagaattaagattaattgttgcctctgccactttggatgcg
tctgcaatgcaacagttcttcaataataataaatctgatgattctaagttaaatacatct
gttatcatgtcagtagaaggtagacaattctctgtggaaatatattatgtgaatgagcct
gtgccttgttacataaaaagtgcagtggatgttgcaattaccataaactgtaaagaaaaa
ccgggagacatcctcatatttcttactggacaagaagaagtcgataaaactgtacagtta
ctactagaatatgcaaatgaactggaacaatccaaagcaaaattaagagttatggttatg
ccaatatatggggcactcccctaccatcagcaattgaaagtattcaagaaagcgccagat
ggtcaccggaaaattatagttgctacaaatatagctgaaacttcacttactattccagga
atagtctacataatagattgcgggttcgtaaaactaaaatggtataatatggaaacacat
acagacaccctcatgatacttccaattagtaagtcatctgcagaccaaagggctggcagg
gcaggacggatgagaccaggaaaagttttcagattgtataccgaagagttcgctcgaaac
ttagctgccatgacaccacctgaaatggttagaagtaatttaacgtatgcagtgttacag
ctgaaggcaatgggggttgataatattttaaagttcaattttccgaacattcctccgatt
gaaaacctgcgaagcgcattagaaacattatttgcactcgattcaattaacatccattct
gagctcaccagaccgttgggattttacatggcagaatttgcattggaccctcttcattca
aaaattttattgagcgctgccgattttggatgcagtgaagagattctaattataatagcc
atgcttcaagttgaaacagttttcgttaagccatcgacaggcactggcaatttaaaagca
agggtgcaaaagaggctgtttgaagtggcagaaggagatttgataacatatttaaatatt
tatcaaggatttatccagagtgagttgtcccaaggtttttgtcacaaaaactatttcagt
tatatgagtctgaaacgcgtggttgaaatcaaaagaatgctagaaaaaacgttggcaaac
tacaacattccgatagtgtctggcaataagacaaccaacaacctttgcagatgtttagta
acaggattttttcctaatgcagcttatttgcatagaagtggagtatataaaacagttcgt
ggtgatatagagttatttattcatccagacagtgttctgtatagcgtaccccaacctcag
tgggtagtattttctgaacttgtgcataaggtcaaactgtacatgcgagatataacggta
atacacagtgaatggctgatagaactggctccacacttttactacaaaactactgctatt
gattaa
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