Dendroctonus ponderosae (mountain pine beetle): 109541223
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Entry
109541223 CDS
T04899
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109541223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109541223
03009 Ribosome biogenesis [BR:
dpa03009
]
109541223
Messenger RNA biogenesis [BR:
dpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
109541223
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
Pre-60S particles
RNases
109541223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Peptidase_M99_C
Rap1a
Motif
Other DBs
NCBI-GeneID:
109541223
NCBI-ProteinID:
XP_019765580
UniProt:
J3JUB0
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MFEHIIRRSFSQLIKPIFKMRPVSNKQCSTAFSTAKLFDLEAERLVWIDMEMTGLNVDQD
KIMEVACIVTDTDLNIVAEGLEIVINQPKETLDNMHEWCVKQHGKTGLTEACLKSQTSLE
QAEDSIMDFLRAHVTPHCSPLAGNSVYMDRFFLIKYMPKVHDYLHYRIVDVSTIKELCRR
WNTPVYKSVPKKEFQHRAQCDIKESINELRYYKNAFFKTS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacatattataaggcgctcattcagccagttgatcaagccaatctttaaaatg
aggcccgtcagcaacaaacagtgttcgaccgcgttctcaacggccaaactattcgacttg
gaagctgagcgcttggtttggatagacatggagatgactggcttgaacgtcgatcaggat
aaaatcatggaagtagcttgcatagtgaccgataccgatctgaacattgtcgctgagggc
ctagaaatcgtcatcaaccagccgaaggagactctggataacatgcatgagtggtgcgtg
aaacagcatggaaagactggactaacagaggcctgtctcaaatcgcaaacttccctcgag
caagctgaggactccatcatggattttttaagggcacacgtgacaccccactgcagccct
ttggcagggaacagcgtttacatggataggttcttccttatcaagtacatgcccaaagta
cacgactatctccattatagaatagtggatgtttccactattaaagagctgtgccgacgg
tggaacactccagtctataaaagcgtgccgaaaaaagagttccagcaccgagcccagtgc
gatatcaaggagagcatcaatgaactgaggtactataaaaatgcctttttcaaaaccagc
tga
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