Dendroctonus ponderosae (mountain pine beetle): 109541367
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Entry
109541367 CDS
T04899
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpa04121
]
109541367
Enzymes [BR:
dpa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109541367
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109541367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR3_2nd
WD40_Prp19
Beta-prop_THOC3
zf-RING_2
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR5
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40
EIF3I
zf-C3HC4_2
Beta-prop_WDR36-Utp21_1st
zf-ANAPC11
zf-C3HC4
Beta-prop_EIPR1
zf-RING_UBOX
Beta-prop_CAF1B_HIR1
zf-rbx1
YqgU
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR36-Utp21_2nd
MIOS_WD40
zf-RING_11
HTH_CHD1_Hrp3
DUF603
zf-Nse
UPF0449
Motif
Other DBs
NCBI-GeneID:
109541367
NCBI-ProteinID:
XP_048526753
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MDVEIFNEVEDSAEDGGLELSSQSAPIPFDDDDGSTCPVCLESWTNCGDHRICCLKCGHL
FGYKCIVRWLDSQTKKSCPTCKLPVRKSDLRFIYAKKLIAIDSIELESMREQLENALMQK
NIALQSVSKYISREQVLQSEIEQLRKKVQELTLGANRSDFRISVQCPINRVRLYMEKTIE
VCNKNSCRDCRVFDISESKNIILIASRSSTDLFGGFGLKKLSLSNYKQVKFIPLHKGPIR
DMCLHPIDNKVLTVSADRKFKIIDTDNTQTIFTVNMESAPWSCSWNPKKSDELLVGTQNG
TVNIFDIRNLNGPVHSLNIPAHFLGDFNPVVSVATVNEPLCPDVVLVAKLTTAWAFECNS
DGTFNRYLLPLEGPFLSMTYEEKSKQMLVSSRPNSQINFARHTVAYLERTSEPDTISCNI
VHAFKGGCTAKLLAKTSCFLPNNIVAGHHETRKSILLYSINTGEEVGSCPTHDNLVLDMK
GLDTASGKFLVYLNEKKIEFFKFNVS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaaatatttaatgaagtggaagacagtgcagaagacggtggtttggagctt
tccagtcaatctgcacctattccttttgatgatgacgatggaagcacttgtccggtctgt
ttagaatcatggacaaattgtggtgatcataggatatgttgtctcaaatgtggtcattta
tttggatacaaatgtatagtgcgatggctagactcccaaaccaaaaaaagctgccccacg
tgtaaactgcccgtaaggaagtcagacttacgattcatatatgccaaaaaacttatagct
atcgatagtatagaactggaaagtatgagagaacaactggagaatgctttgatgcaaaaa
aatattgccctgcaaagtgtatcaaaatatattagtcgagaacaggtgcttcagtctgaa
attgaacaattaaggaaaaaagttcaagaattaactttaggtgcgaatcgaagtgacttc
cgtatttctgtccaatgtcctatcaacagggtgagattgtacatggagaaaaccattgaa
gtttgcaataaaaatagctgcagagattgcagagtgtttgacatttcagagtctaaaaat
ataatactgatagcgtctagatcgtcgacagatctttttggagggtttggtttgaaaaag
ctgtctctctcaaattacaaacaagttaaatttattcctttgcacaaaggtccaattcga
gatatgtgcttgcacccaatagacaataaagttttaacagtctcagcggatcgaaaattc
aaaattatagatacggacaacacgcagacgatctttaccgtaaatatggaatctgccccg
tggtcgtgctcatggaacccgaaaaaatctgacgagttgcttgtaggaacccaaaatggc
acagtcaacatatttgatattaggaacctaaatggaccagttcactcgttaaacattcct
gcccatttcttaggtgactttaatccagtcgtctcagtggcaacagtcaacgaaccattg
tgccctgatgttgttttggttgctaaattgactacagcctgggcatttgaatgtaattca
gatggaacgttcaaccgatatcttttgccactagaaggaccattcctatcaatgacatat
gaggaaaagtccaagcaaatgttggtgtcttcacgaccgaatagtcaaattaattttgct
cgacatactgttgcttatttggaaaggacaagtgagcctgatacaattagttgcaatatc
gtgcatgcgtttaagggtggatgcactgcgaaactgctggcaaaaacttcatgtttcctg
cccaacaatatcgttgccggccaccatgagaccagaaaaagcattttgttgtacagcatc
aacactggtgaagaggtcggttcctgtcccacccacgacaatctagttttggacatgaaa
ggactggatactgctagcggcaaatttttagtctatttaaatgaaaaaaagatagagttc
ttcaaatttaatgtctcctag
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