Dendroctonus ponderosae (mountain pine beetle): 109541934
Help
Entry
109541934 CDS
T04899
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109541934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109541934
03009 Ribosome biogenesis [BR:
dpa03009
]
109541934
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109541934
Spliceosome [BR:
dpa03041
]
Complex A
U1 snRNP components
U1 related factors
109541934
Complex B
109541934
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
Pre-60S particles
Helicases
109541934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
109541934
NCBI-ProteinID:
XP_048524948
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSYNQGGGFRGRDSNFGSGGFNRSFGGRSGDGEGFRSGGGGYRSGGGGGFRNGSGGRGGD
RFEGGGSRFGGRGGGGGGPGKGLRKPHWDMQQLHPFKKDFYVPHPAVASRSTYEVEAFRQ
AKEITVDSEVPNPIQNFEEASFPDYVLQEVHNQGYDFPTPIQSQGWPIALSGRDMVGIAQ
TGSGKTLAYILPAIVHIKNQPRLSPGEGPIALVLAPTRELAQQIQQVANDFGRSSYIRNT
CVFGGAPKGPQARDLERGVEICIATPGRLIDFLEKGSTNLARCTYLVLDEADRMLDMGFE
PQIRKIIEQIRPDRQTLMWSATWPKEVMRLASDFMTDFITINVGSLQLSANHNILQIVDV
CQEHEKEFKLNQLLQEIGNNAEPGAKVIIFVETKKKVEQITRNLKRYGWSALCMHGDKSQ
QERDYVLKDFRMGKSTILVATDVAARGLDVEGIKYVINYDYPNSSEDYIHRIGRTARSDT
TGTSYAFFTPGNFRQAKDLVSVLNEANQVVNPKLAEMMNRGGSGGYGGRGRWGAPGGRSG
GMSGGSRGYSRGFSGGGSRGSDDRGGYGAGGVFGNGGAPPPRGGSSSFRSGGVSRFSGGS
MTGSSGLSRG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaaccaaggaggaggatttcgaggtcgcgacagcaacttcggctcagggggc
ttcaatcggagcttcggggggcgaagtggcgatggcgaaggcttcagaagcggcgggggc
ggttaccgcagtggcggcggcggcgggtttagaaatggatcaggtggcagaggtggcgat
cgctttgaaggtggtggaagtcgatttggtggccgaggaggaggcggcggcggtccgggc
aaaggactgcggaagccccattgggacatgcaacagctgcacccgtttaaaaaggacttt
tatgtcccacacccagctgtggccagtcgttccacttacgaagtagaggcattcaggcaa
gccaaggaaatcaccgttgacagcgaggttcccaacccaatccagaacttcgaggaggcc
agttttccggattatgtgttgcaggaagtccataatcaaggctatgattttcccactcca
atccaatctcaaggatggccgatagcgctcagtggacgcgatatggtcggcattgctcaa
accggatcggggaaaacactggcttacatccttccggctatagtgcacattaagaaccag
ccgcgactaagtcctggtgaaggtccgatagcgttggtgctggcgcccactcgagaactc
gcccaacaaatccagcaagtggccaacgattttggacggtcgtcttacatccgtaacacc
tgcgtgtttggtggggcccccaaagggccccaggccagggatttggagcgaggcgtggag
atttgcatcgctacgccaggcagattgatcgatttcctggaaaagggctccactaatctg
gccagatgcacctacttggtgctggacgaggccgacagaatgctggacatgggcttcgag
ccgcaaattcgcaagataatcgagcagattcgcccggacaggcaaacgttgatgtggtcg
gccacttggcctaaggaagtcatgcgacttgcgtccgatttcatgactgacttcatcacc
atcaacgttggttcgctgcaactttccgccaatcacaacatcctgcagattgtggatgtt
tgccaggagcatgagaaggaatttaagttgaaccagttgctgcaggaaatcgggaacaat
gcagagccgggggcgaaagtgattattttcgtggaaaccaaaaagaaagtggagcaaata
accagaaatctcaaacggtacggctggtccgctctgtgcatgcacggtgacaaaagccag
caggagcgcgactatgtcctgaaggactttagaatggggaaatccactattctagttgcc
actgatgtggcggcaaggggactagatgtggagggcataaagtacgtgataaactacgac
tatccgaactcttccgaagactacattcatcggattggaagaacggctcgctccgatacg
actgggacgtcttatgcctttttcacgcccggcaattttcggcaagctaaagatttggtg
tctgtcctaaacgaagccaatcaggtggtcaatccgaagttggctgaaatgatgaaccgc
ggaggttcgggcggttatggagggcgtggccgttggggcgcccccggcgggcgaagtggc
ggcatgtcgggaggttcccgaggttattccaggggattttcgggcggtggcagtcgaggt
agtgacgaccgtggaggttatggagccgggggagtgtttggtaacggtggcgctccgcct
ccaagaggtggcagtagcagcttcagaagcgggggagtttcgcgattcagtggaggatca
atgacaggttccagtggattgagtagagggtga
DBGET
integrated database retrieval system
