Dendroctonus ponderosae (mountain pine beetle): 109542271
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Entry
109542271 CDS
T04899
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03430
Mismatch repair
dpa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109542271
03460 Fanconi anemia pathway
109542271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109542271
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109542271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
109542271
NCBI-ProteinID:
XP_019766983
UniProt:
A0AAR5Q164
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MEQTVVVEAQPEHLPTAADSTEIRPINTETVHRICAGQVVLSLAIAMKELVENAIDAGAT
IIDIHLKEYGSELLEVADNGNGVHRSNFPGLALKHCTSKLSDFDDLERLGTLGFRGEALS
SLCALADVEITTKHGAADSAARLSYDHGGNIVSEEVAARQRGTTVSLRNIFAPLPVRRKE
FTKNLKREFSKMCNLLYAYCLLPNGIKYSCSNTTAKGAKSSLVATEGHKTVRENVISVFG
LKQLASLLDVPLALPGPPILEEYGVNWAPGDKLPFSFDFLVSSALHGSGRSSADHQFFYI
NHRPCEPSKIIKLVNELYRQFNNKQYPFVFLDIATTSCMVDVNITPDKRQVFLEKEKLLL
ATVKASLLEAFKELPATLVTNTLEVSRGLKRHATEVRVKNTSILDTFRKRPRSEGSSKPA
KNEAESKSVFSARDVKDSELEADEKLEMLVEIACNLSKHESDDEPVVVDIDGPQQVESQR
RQVPLKLNYSALKEKFLNHLENQQQAPDSNTVHFRSDIAPDANKAAEEELSRHIAKEDFA
KMAIIGQFNLGFIVTKLQQDLFIVDQHATDEKYNFEQLQRNSVMDSQKLVNPKLLELTAA
ARSTLIEHEEVFKKNGFSFETGENIFLTSIPIGEGCVLGKPDIDEMIFMLQEDDSRKTMC
RPSRVRSVFASRACRKSVMIGKSLSRTEMKNLVAHMGDIEQPWNCPHGRPTMRHLVNLSL
LTEQIEPV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaactgtagtagttgaggcgcaacctgagcacctgcccacagcggcggatagc
accgaaatccggccaattaataccgaaacagtgcaccggatatgtgccgggcaagtagtg
ctcagcctggccattgccatgaaagagctggtggagaatgcaatagacgctggggccacg
atcatcgacatccacctgaaggaatacggcagcgagctgctggaggtggcggacaatggt
aatggggtacacagaagcaactttccaggcctggcgctgaagcactgcacctccaagttg
agcgattttgacgatctggagcgcctcggcactctgggcttcaggggcgaagcccttagt
tcgctctgcgcgcttgctgatgtggaaatcaccaccaaacatggtgctgcagactcagct
gctcgcttaagttatgaccacggaggtaacatcgtcagcgaagaagtggccgcaaggcag
cggggaaccacagtgagtttgaggaacatttttgccccgctgccagtgaggcgaaaggaa
ttcacaaagaatctgaaaagagagtttagcaaaatgtgcaacctgctctacgcctactgc
ctgctcccgaacggaatcaaatactcctgctcgaacaccacagccaaaggcgccaaaagc
tcgttagtggccacagagggacataaaacagtgcgggaaaacgttatcagtgtgtttggg
ttgaagcaactggcttcactactagacgtgcccctggcgttgcccggcccgcccattctg
gaggaatatggggtgaattgggctccgggagacaagttgcccttcagcttcgacttcctg
gtttccagcgccctgcacgggagcgggcgcagctctgccgaccatcaattcttctacatc
aaccaccgcccgtgtgagccatcaaaaatcatcaagctggtcaacgagctctatagacag
ttcaacaacaagcaatacccctttgttttcttggacattgcaaccacatcttgtatggtg
gatgtgaacattacccccgataaaaggcaagtgtttttggagaaggaaaaactgctgctg
gccactgttaaggcctcattgttggaagcgttcaaagagctgcctgccaccttggtgact
aatactttggaagtatccagggggctgaaacggcacgccactgaggttcgggttaaaaac
accagcattctggatacgttcaggaaaaggccccgatctgagggctcgtccaagccagcg
aaaaacgaagccgagtctaagagtgtgtttagtgcccgagatgtgaaagacagcgaacta
gaggccgatgagaagctggaaatgctagtggaaatcgcctgcaatttgagcaaacatgag
agtgacgatgagccggttgttgtggacatcgacgggccacagcaggtcgagagccaacga
aggcaagtgccgttgaagctcaactacagcgcgctgaaggaaaagtttctcaaccatctg
gaaaatcaacagcaagcccccgattcaaacaccgtgcactttcgttctgatatagcgccc
gatgccaataaggcggccgaagaagagctgagcaggcacatagccaaggaggattttgca
aaaatggcaattattgggcaatttaacttgggcttcatcgtgaccaagttgcagcaggat
ctgttcattgttgaccagcacgccactgacgagaagtacaactttgagcagctgcagcgc
aacagcgtgatggacagtcagaagctggtcaatccgaagctactggagctcacggcagcc
gcccgaagcaccctcatagagcacgaagaggtgttcaaaaagaacggattttcgtttgaa
acgggcgaaaacatcttcctgacttcgattccgattggcgagggctgcgtgctgggcaag
ccggacattgacgagatgatcttcatgcttcaggaggacgacagtcggaagaccatgtgc
agaccgtcgcgggttcgctcggttttcgcatcgcgcgcttgtcgcaagagcgtgatgatc
ggcaagtcgctgtcgaggaccgaaatgaagaatctcgtcgcccatatgggcgacattgaa
cagccatggaactgcccccatgggcgacccaccatgcgccatttggtcaacctcagtttg
ctcacggagcaaattgagcctgtttaa
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integrated database retrieval system
