Dendroctonus ponderosae (mountain pine beetle): 109542452
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Entry
109542452 CDS
T04899
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpa04131
]
109542452
Membrane trafficking [BR:
dpa04131
]
Protein recycling
Others
Retriever complex
109542452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
DUF5984
Motif
Other DBs
NCBI-GeneID:
109542452
NCBI-ProteinID:
XP_048517963
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MSANLPVWKTERNVDSRKLEFNWVATVDHPLKNVVVTERIPRRVLGSAPSTGRSTPISAA
ANISEPLALALKKLDPLTEFAMREELDPLSKIAAEMDAVDSLSAKKEPSKKADEKRDKTD
SWTSRKSGILQKYTTSEKLSMVTSFLLEGEKVVVRAQSTKVDKVQHRLEQLDSFEEGPQR
KLDLSQAEYLLKIQQLNKELVQAWNMQQRVKALKIAIQCAKMLADSDVLPFYPSKFVLVT
DILDCFGKLVYERLRAKAVYYKPGGKTPVALPEDFTPDMVPDSAKETCLNWFFKIASIRE
LVPRLYVEMALLKSYYFISANECPEALFRLTEMILGIGNPLVAIYARCYLCRVGLNVMTR
HSETGYLKRNFECFLETYQHLFGRSATGDLSRQNLSIPIYMTLYTPALDYIMEAVVQHSP
ESVLSELLEECKRYSNSSLILNTIMSGFKPTYIAQRTLQFLCMIGQCTDDGIPLHSLLRT
LGLCVSICPPPAEQRKPALNAVWSNIAQLKKPSEYMSCVEIWVQFIARNFSTREVNTVLG
DVLDHMVPNRCSEKFPMQLKAIVRHIVAEITDFEALLSMDNFLPLIDLFHDESTKVEVCK
LILTSNLVEQKTNDLVTINALMYLGGILHDCVNALTPEDEHRQIGDILCNIVNLVDYGRD
FEQQLQFYVEARGSFASFDAVLAQLVQRVNLLAVNTRLVVKGLHTRKTGDFVRACAAYCF
ITIPSIDSTKVRLSLYLLSGQVALSNHCLGQADACFRAILSVISELTPSADTEACLLPFV
RQFLAVLLVVPDNPDRGILSVSKKLLNVLKNFGWSSANLCSIYINVIDLLAVMAQEVYPY
HIDRVESNDALWGSEPGFIEETENMIAIIIGEILSLLKELXPSRKQFF
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaacctcccagtttggaaaaccgagcgaaatgtggactcgaggaagctcgaa
tttaattgggttgccaccgtggatcaccctctaaaaaatgtcgttgttacagaaaggatt
ccccgcagagttttgggctccgcccccagcacagggcgcagcacgccaatatcagccgcc
gccaatatttctgagcccctggctcttgccctgaagaaactcgaccccttaacggagttc
gctatgcgcgaggagctggaccctttatcgaaaatagccgcagaaatggatgctgttgat
agcttatcggctaagaaagaacccagtaaaaaggccgacgaaaaacgcgacaaaactgac
tcttggacaagcaggaagagtggcattttgcaaaagtataccacttcagaaaagctttca
atggttactagttttctgttggagggagagaaagttgtagttagagcgcaaagcaccaaa
gtggacaaagtgcagcatcggctagagcaactggatagtttcgaagaaggtccacagaga
aagctcgatctatcgcaggcggaatatttgctgaaaattcaacagctcaacaaggagctg
gtgcaggcttggaatatgcagcaaagagtgaaagccctaaagatcgcaatccaatgtgca
aaaatgttggccgattcggacgttttacccttttaccccagcaagtttgtgttggttacc
gatattttggattgctttggaaagctggtttatgaaaggctgcgtgcgaaggcggtttat
tacaagcctggaggtaaaaccccggtagctctgcctgaggactttacgcccgacatggtg
cctgatagcgccaaagagacttgcttaaattggtttttcaagattgcctccatcagggaa
ctagtgccaaggctgtatgttgagatggctctgctaaagtcctactattttatatcggca
aatgaatgccccgaggcactattcaggctgactgagatgattttgggcattggaaaccct
ttggtggcaatatacgcgcgctgttacctttgcagggtcgggctaaacgttatgaccaga
cactccgagaccggttatctgaaaagaaattttgagtgcttcttggaaacgtaccagcac
ttatttggcagaagcgccacgggcgatttaagcaggcaaaacctcagcattcccatttac
atgaccctctacactcctgctctagattatataatggaggcggtagttcagcattctcct
gaaagtgttttgtcggagcttttggaggagtgcaagcgctacagcaacagttcgttgatt
ttaaataccatcatgtcgggctttaagcccacgtacattgcccagaggactcttcagttt
ttgtgcatgatcggacagtgcacagatgatggaattccgctgcactcgcttttaagaaca
ctgggactgtgcgtcagcatctgcccaccgcctgcagagcaacgaaaaccagccctaaac
gccgtttggagcaacattgctcagctgaaaaaaccgtccgagtatatgagttgtgtggaa
atttgggtgcagtttatcgcccgcaatttttcgactcgggaagtaaacaccgtgctgggc
gatgtgctcgaccatatggttcctaaccgatgctcggaaaagttccctatgcagctaaag
gcgatagtcagacacattgtagcggaaattaccgatttcgaagcgcttctttcaatggac
aattttctgccgttgatcgacttgtttcacgacgaatccaccaaagtggaagtttgcaag
ctgatattaacttccaacttagtggagcagaagacaaacgatctggtaacaatcaacgcg
ctgatgtatttgggcggcattttgcatgactgcgttaacgctctgactcctgaggacgag
catcggcaaatcggggacattttgtgcaacattgtcaatctggtggattatgggcgcgat
ttcgagcagcaattgcagttttacgtggaagcccgcggctcttttgccagttttgacgct
gttttggctcagctggtccagcgcgtgaatttattggctgttaatactcggctagtggtt
aaggggcttcatacaaggaaaaccggggattttgtgcgtgcgtgtgccgcttactgtttc
atcaccattccttccattgattccacgaaagtgcgattaagcctgtatttgctttctggg
caagtggcgcttagcaatcactgtctcgggcaagctgatgcgtgctttagagccatcctc
tctgtaatatccgagttgacgccgtctgctgacaccgaagcatgtctgctcccatttgtg
cggcaatttctcgcagttctgctggtggtgccagacaatccagacaggggaattctgagc
gtttccaagaagctgctcaatgtgctgaagaatttcggctggagctccgccaatttgtgt
tcaatctacatcaacgttatcgacttgctggctgtaatggcgcaagaggtctatccatat
cacatagatcgagttgagtccaacgacgctctatggggctccgagccgggatttatcgag
gaaactgagaatatgatcgcaattatcatcggcgagatcctcagcttgcttaaggaactg
nggccttccaggaaacaattcttttaa
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