Dendroctonus ponderosae (mountain pine beetle): 109542563
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Entry
109542563 CDS
T04899
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03030
DNA replication
dpa03410
Base excision repair
dpa03420
Nucleotide excision repair
dpa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109542563
03410 Base excision repair
109542563
03420 Nucleotide excision repair
109542563
03430 Mismatch repair
109542563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpa03032
]
109542563
03036 Chromosome and associated proteins [BR:
dpa03036
]
109542563
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109542563
DNA replication proteins [BR:
dpa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109542563
DNA Replication Termination Factors
ELG1-RFC complex
109542563
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109542563
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109542563
Check point factors
HRAD17(Rad24)-RFC complex
109542563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_assoc_2
AAA_11
AAA_14
AAA_24
RuvB_N
AAA_16
RCF1-5-like_lid
ResIII
AAA_5
DUF815
AAA_19
AAA_7
DEAD
AAA_30
PhoH
Mg_chelatase
Glyco_hydro_57
AAA_2
TIP49
Motif
Other DBs
NCBI-GeneID:
109542563
NCBI-ProteinID:
XP_048520535
UniProt:
A0AAR5Q2D2
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MVQKANLPWVEKYRPSTLDDLVSHEDIIKTVGKFIKEDQVPHLLFYGPPGTGKTSTILAC
ARQLYTPSQFSSMVLELNASDDRGIGIVRGQILTFASTRTIFKKGFKVIILDEADAMTMD
AQNALRRIIEKYTENIRFCIICNYLSKIIPALQSRCTRFRFGPLSPDQIMPRLNYVVDEE
KVQITEDGKNALLTLANGDMRKVLNVLQSTWLAHKNVNEDTVYTCVGHPLRKDIENMVNW
LLNEDFKKAYHNIQELKTLKGLALNDIITELHKFIHRIEFPFQTSIRILDKLAEIEYRLA
QGANENIQLTGLISSFQFIKQIQPPE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaaaaagctaatcttccgtgggttgaaaaatatcgtcccagtactttagacgat
ttagtgtctcatgaggatattataaaaacggttggtaaatttattaaagaagatcaagtg
ccacacttgttattttatggaccaccaggaacaggaaaaacaagcacaattttagcttgt
gcgcgacaactttataccccatctcagttttcgtccatggtactggaactaaatgcatcg
gatgatagaggtattggtattgtcaggggacaaattttgacttttgctagtacgagaacc
attttcaaaaaaggttttaaagtaatcattcttgatgaagctgatgccatgactatggat
gctcaaaacgctttaaggagaattatcgaaaaatacacagaaaatatcaggttttgcatt
atttgcaactatctaagcaaaataatacctgcccttcagtcaaggtgtaccagatttcgc
tttgggccattgtcaccggaccagatcatgccaaggctgaattatgttgttgatgaggaa
aaggtgcaaataactgaagacggcaagaatgctttgttaacgttagctaatggcgatatg
agaaaagtactgaatgttttacaaagcacatggttggcacacaaaaatgtgaatgaagac
acagtctacacttgtgtaggacatccacttagaaaagacattgaaaatatggttaattgg
cttttaaatgaagactttaagaaggcgtatcacaatattcaagaattaaaaacattgaaa
gggctagcgctcaatgatattatcacggaactgcacaagtttattcacagaatcgaattt
ccatttcaaacgtctatcagaatcttggataaactggcagaaattgaataccggttagca
caaggagctaatgaaaacatccagttaaccggactgatttcatccttccaattcattaag
caaatacagccaccagaataa
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