Dendroctonus ponderosae (mountain pine beetle): 109542945
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Entry
109542945 CDS
T04899
Name
(RefSeq) clathrin heavy chain isoform X1
KO
K04646
clathrin heavy chain
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04142
Lysosome
dpa04144
Endocytosis
dpa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109542945
04142 Lysosome
109542945
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109542945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpa04131
]
109542945
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpa04147
]
109542945
Membrane trafficking [BR:
dpa04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109542945
Exosome [BR:
dpa04147
]
Exosomal proteins
Proteins found in most exosomes
109542945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
PSD2
TPR_1
Motif
Other DBs
NCBI-GeneID:
109542945
NCBI-ProteinID:
XP_048521839
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MSQPTLLPIKFQEHLQLTNIGINVANISFATLTMESDKFICVREKVGETSQVVIVDMADS
ANPIRRPITAESAIMNPASKVIALKGRKRPPSPSSRSTWLCLTFAGKAGVEAQKTLQIFN
IEMKSKMKAHTMNDDVIFWKWISPNTLALVTESSVFHWSMEGDSQPVKMFDRHSSLNGCQ
IINYRTDPKQNWLLLVGISAQQARVVGAMQLYSVERKCSQPIEGHAASFATFKMEGNPEP
STLFCFAVRNLQGGKLHIIEVGQSPPGNQPFPKKTVDVFFPPEAHNDFPVAMQVSNKYDV
IYLITKYGYIHMYDIESAVCIYMNRISSETIFVTAPHEGTGGIIGVNRRGQVLSVSVDEE
SIIRYVNQVLHNPDLALRLATRNNLSGAEELFVSKFQLLFQNGQYTEAAKVAANAPKGIL
RTPATIQMFQQVPTQAGQNSPLLQYFGILLDQGQLNRYESLELCKPVLLQGRKQLLEKWI
KEEKLECSEELGDLVKQVDATLALSVYLRANVPAKVIQSFAETGQFQKIVLYAKKVSYTP
DYVFLLRQVMRTNPEQGAAFASMLVADEEPLADINQIVDIFMEQNMVQQCTAFLLDALKN
NRPTEGHLQTRLLEMNLMSAPQVADAILGNNMFTHYDRAHIAQLCEKAGLLQRALEHYTD
LYDIKRAVVHTHLLPAEWLVSFFGTLSVEDSLECLKAMLTANIRQNLQICVQIATKYHEQ
LTTKALIDLFESFKSYEGLFYFLGSIVNFSQDQEVHFKYIQAACKTGQIKEVERICRESN
CYSPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRL
PVVVGGLLDVDCSEDIIKNLILVVRGQFSTDELVEEVEKRNRLKLLLPWLESRVHEGCVE
PATHNALAKIYIDSNNNAERFLKENQWYDSRVVGRYCEKRDPHLACVAYERGQCDRELIA
VCNENSLFKSEARYLVRRRDPELWAEVLQEANPYRRPLIDQVVQTALSETQDPEDISVTV
KAFMTADLPNELIELLEKIVLDSSVFSDHRNLQNLLILTAIKADATRVMDYINRLDNYDA
PDIANIAINSHLYEEAFAIFKKFDVNTSAIQVLIEQVNNLDRAYEFAERCNEPAVWSQLA
KAQLNQGLVKEAIDSYIKADDPSAYMAVVETASQNDGWEDLVRYLQMARKKARESYIESE
LIYAYARTGRLADLEEFISGPNHADIQKIGDRCFDDGMYDAAKLLYNNVSNFARLAITLV
HLKEFQGAVDSARKANSTRTWKEVCFACVDAEEFRLAQMCGMHIVVHADELQDLIDYYQD
RGYFEELIGLLEAALGLERAHMGMFTELAILYSKYKPAKMREHLELFWSRVNIPKVLRAA
EQAHLWAELVFLYDKYEEYDNAVLAMMAHPTEAWREGHFKDIITKVANIELYYRAIQFYL
DYKPLLLNDLLLVLAPRMDHTRAVSFFTKTNHLQLVKSYLRSVQNLNNKAINDALNSLLI
EEEDFQGLRTSIDAFDNFDNIGLAQRLEKHELTEFRRIAAYLYKGNNRWKQSVELCKKDR
LFRDAMEYTAESRNQELAEELLAWFLERKAYDCFAACLYQCYDLLRPDVIMELAWRHQIM
DFAMPYLIQVTRELTTKVDRLEKSDAERQTEAAEQDAKQPMMIPEPQLMLTAGPGMGIPP
QNFVAPQAYPQPGYAPQMPYQGGYPGAM
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcccaccctgctgcccatcaagttccaggaacacttgcagctcaccaacatt
ggcatcaatgtggccaacatctccttcgccaccctcaccatggagagcgacaagttcatt
tgcgtgcgcgaaaaagtgggggaaacctcccaggtggtgatcgtggacatggcggattcc
gccaacccgatccggcggccaatcacagccgagagcgccatcatgaaccccgcctcgaaa
gtgatcgccctcaaaggtaggaaacgcccccccagtccaagttctcgttcaacctggctt
tgcctgacttttgcaggcaaggcgggcgtcgaggcgcagaagacgctgcagatcttcaac
atcgagatgaagtccaaaatgaaggcgcacaccatgaatgatgacgtgattttctggaag
tggatcagcccgaacacgctggccttggttaccgaatcctcggtcttccattggtccatg
gagggcgactcacagcctgtaaagatgtttgacagacactcgtcgctgaatggatgccag
ataatcaactaccgaacagatccgaagcaaaactggctgctgttggtgggaatcagcgct
cagcaggcccgagtggtgggcgccatgcaactctactccgtcgaacggaagtgctcccag
cctatcgaaggccacgcggcctcgttcgccaccttcaaaatggagggcaaccccgagccc
tccacgctgttctgcttcgccgtgcgcaatctccaagggggcaaactgcacatcattgag
gtggggcagagccccccgggcaaccagcccttccccaagaagactgtcgacgtgttcttc
ccgccggaggcgcacaacgacttcccagtagccatgcaggtttcgaacaagtacgacgtc
atctatctcatcaccaagtacgggtacatccacatgtacgacatcgagagcgccgtctgc
atctacatgaaccgcatctccagcgaaaccatctttgtcactgcaccgcatgagggaacc
ggcggcattatcggggtgaacaggagaggccaggtgctgtctgtttcggtggacgaggag
agtatcattcgctacgtgaaccaggtgctgcataatcccgatttggcgctgcgtctggcc
actcgcaacaacctatcgggcgctgaagagctcttcgtcagcaagttccagttgctgttc
cagaacggacagtacacggaagcggccaaagtggctgctaacgcccctaagggaatcttg
cgcacgcccgctaccatccagatgttccagcaagtgcccactcaggcagggcagaacagc
ccgcttttgcagtactttggcattctgctcgatcagggacaactgaacagatacgagtcc
ctggaactgtgcaagccagtgctgctgcaaggccgcaaacagctgctggagaagtggatc
aaggaggagaagctggagtgcagcgaagagctgggcgatctggtcaagcaggtggacgcc
acgttggctctttcggtctacctgagggccaacgtgccggccaaggtgatccagagcttc
gccgaaacggggcagttccagaaaatcgtgctctatgccaagaaggtgtcctacacgccc
gactacgtgttcctgctgaggcaggtgatgcgcaccaacccggagcaaggcgctgccttt
gcaagcatgctggtggccgatgaggagcccttagccgacatcaatcaaatcgtcgacatt
ttcatggagcagaacatggtgcagcaatgcaccgccttcctgctcgacgccctcaagaac
aacaggccgactgagggccatttgcagaccaggctgcttgagatgaacctgatgtcggcg
ccgcaagtcgccgacgccatcttaggcaacaacatgtttacgcactacgatcgggctcac
attgctcagctctgcgagaaggcgggcctacttcaaagggcgctggaacactacacggat
ctgtacgacatcaagagggcggtcgtgcacacccatctacttccagccgagtggttggtc
agtttctttggcacgctgagcgttgaagacagtttggagtgcctcaaagccatgttgact
gcaaacatccggcaaaacctgcagatttgcgtgcaaatcgccaccaaataccacgaacag
ctcaccaccaaagccctaatcgacctgttcgagagcttcaagagctacgagggcctgttc
tacttcctgggctcgatcgtcaacttctcccaagaccaggaggtgcatttcaagtacatt
caagccgcctgcaaaaccggtcagatcaaggaagtggagaggatttgcagggaatccaac
tgctacagcccggagcgagtgaagaacttcctcaaggaggccaagctaaccgaccaattg
ccgctgattatcgtgtgcgatcgcttcgacttcgtgcacgatctggtgctgtacctgtac
agaaactccttgcaaaagtacatcgagatatacgtccagaaggtgaaccccagccggctg
ccagtcgtagtgggcgggcttctggatgtggactgttcggaggatatcatcaagaacctg
attctggtcgttagagggcaattttctactgatgagctggtcgaagaagtggagaaaagg
aacaggttgaagttgttgctgccctggctggagagccgagtgcatgagggctgcgttgag
ccggccacgcacaacgcactggccaagatctacatcgattcgaacaacaacgcagagcgc
ttcctgaaggagaaccaatggtacgactcgcgcgtggttgggcgctactgcgagaagcgc
gacccccacttggcctgcgtggcgtacgagcgcggccaatgcgatcgcgagctgatcgca
gtctgcaacgagaactccctgttcaagagcgaggcgcgctacttggtgcgtcgccgcgac
cccgagctgtgggccgaagtcctgcaggaggccaacccgtaccgcagaccacttatcgac
caggtcgtccagacggcccttagcgagacgcaagatcctgaggatatttcggtaactgtc
aaggcgttcatgaccgccgatctgcccaacgagctcatcgagctgctggagaaaatcgtg
ctggacagttcagtgttttccgatcaccggaacttgcagaacctgctgattcttacagca
attaaggcggacgcgacgcgcgtcatggactacatcaaccgcttagacaactacgacgcg
cccgacattgcaaacatcgccatcaacagccatctctacgaggaggcgtttgcgattttc
aagaagttcgacgtcaacacctcggccatccaggtgctcatcgagcaggtcaacaatctg
gatcgcgcctacgagttcgcagagcggtgcaacgagccggcggtgtggagtcagctggcc
aaggcccaactcaaccaaggcctggtgaaggaagcgatcgactcgtacataaaggcggac
gatccgtccgcctacatggcagtggtcgagactgcgtcccaaaacgacggttgggaggat
ttggtgcgctacctgcaaatggccaggaagaaggcccgagagagctacatcgaatcggag
ctgatctacgcctatgcgcgcaccggaagactggccgacttggaggagttcatttccggg
ccgaaccatgcagacattcagaagataggcgaccgctgtttcgatgacggcatgtacgat
gcagcgaagctgctctacaacaacgtttcgaactttgcgcgactggccatcactctggtg
cacctcaaggagttccagggtgcggtggacagtgcccggaaggcgaacagcacccgcact
tggaaggaagtttgcttcgcgtgtgtggatgcggaagaattccgtctggcgcagatgtgc
gggatgcacatcgtggtccatgccgatgagctccaagacctgatcgactactatcaggat
cggggctacttcgaggagctgatcggcctgctagaggcggctttgggcctggaaagagcc
cacatgggcatgttcactgagctggccatcctctactccaagtacaagccggcgaaaatg
cgcgagcacttggagctgttctggtcgcgggtcaatatccccaaggttctaagggctgct
gagcaggcccatctgtgggccgagctggtgttcctctacgacaaatacgaagagtacgac
aacgcggtgctggccatgatggcgcacccgacggaggcgtggcgcgagggccactttaaa
gacatcatcaccaaggtggccaacatcgagctctactatcgggccatccagttctacctg
gattacaagccgctgcttctcaatgatctgctgttggtgttggcgccccgcatggaccac
accagggccgtgtcattcttcacgaaaaccaaccatcttcaactggtcaagtcctacttg
cgttccgtacagaacctcaacaacaaagcgatcaacgacgccctcaactcgctgctgatt
gaggaggaagacttccagggcttgcgaacatccatcgacgcgtttgataacttcgataac
atcgggctggcgcagcgtttggagaagcacgaactgaccgagttcaggcgaatcgccgct
tatctgtacaaaggcaacaacagatggaagcagagcgtggagctatgcaagaaggacaga
ctgttccgggacgcgatggagtatacggccgagagccgcaatcaggagctggccgaagag
ctgctcgcttggttcctagagcgcaaggcctacgactgttttgcggcctgtctctatcag
tgctacgaccttttgcgccccgatgttataatggaactggcctggcggcatcagatcatg
gacttcgccatgccctatctgatccaggtgactcgcgagctgaccaccaaggtggaccgg
ctggagaagtcggacgcagagcgtcaaacagaggccgccgagcaggacgccaaacagccc
atgatgattccagagccgcagctcatgttaaccgccggcccggggatgggaatccctccg
cagaactttgtggcgccgcaggcctacccgcagccaggctacgctccccagatgccctat
caggggggctacccgggggccatgtag
DBGET
integrated database retrieval system
