Dendroctonus ponderosae (mountain pine beetle): 109543087
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Entry
109543087 CDS
T04899
Name
(RefSeq) uncharacterized protein LOC109543087 isoform X1
KO
K13191
RNA-binding protein 16
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpa03021
]
109543087
03041 Spliceosome [BR:
dpa03041
]
109543087
Transcription machinery [BR:
dpa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109543087
Spliceosome [BR:
dpa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109543087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
109543087
NCBI-ProteinID:
XP_019768173
UniProt:
A0AAR5Q4J9
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MEAVKAFNAELSALYEVKPPISKAKMTALTRGAIKAIKFYKHVVQSVEKFILKCKPEYKV
PGLYVIDSIVRQSRHQFGAEKDVFAPRFSKSLQQTFVNLFKCPPEDKSKIIRVLNLWQKN
QVFAPEVIQPLFDLADPNNPIHQQIQQQSTPIQQTNGAQSQVAKGSPALQRTPTKVNQPT
SSETPAANLNLTDPVLQQLQHLQRLLSKGADAATVRAEQVHFDKKLLDFDYGDDEEEVNP
SPRPTQSGSSSADPVASLLTNPEVLRQLQTLQSTLAGAVNPPSVESENDRMKKLHEMKLQ
EDEFDKRLAQTVPNLPFAAECDFKLSSTTSMIGGLHFIAPQPEIQIGQGYEIQNDTNTFY
GSQPVTNEVEVINLDHDDSHSEDERYKRKRSRSRSRDRGREKDRRRRTRSRSRSRGRRHR
SKSKDRKEKEKREKQKETEKDKERKKRGLPAMKSNNLSVCSTTLWVGHLSKLVHQDDLSN
TFGEFGDIVSIDLISPRGCAFIVMHRRQDAARCLAKLKNYNLHGKAITIAWAPGKGVKGK
DLKDYWEGDLGVSYIPYNKLRPDMDLEALEDGGMIDEDSMPDWMKMKVEESAKKKVADLT
PFLMGAGDTSNHSTIDTSQPPPLPPSSLMQPPMLSMVNPFQMNNRFLSMIPNMANLANLP
LGVPPPNMAPPSIMSNLGLGVGSPFQGPPGFIPPGMPPPQQQEQKPNAQPSSDVKLRNLS
ESLMNLTGQPLGLPPQLPTHLPPPPLHSLMDDSMDVEMEDAVHPDLNKPPPNIALSDQLQ
AALNVPFIRDNRRDDSRFSPSRRDGRDNKRDRSNERGRRRSRSRERDQNRDRDRNGARDR
ERRDRDRDFSRGGRDRDRRGGDRDRVNRWGAVDRRDDRGSSDRRDSGYDRRAGPLGRRDT
NDRRDDSFERRDAARSTERRDSVDTREKNDRSKTLNDRLKEMAGINFDNAADQSERKASP
RNLGASEAKADSPKEGGLRFEPPVSVSEDIFSSLPPETGREDRSSTDLVRNPSPPDNKSA
DLNNEGVPQGNNESSVTPCNENEDSLQLLTSSRGIELGSDLQDSKQFGRERYETGGSKEF
GFGGPRSFDGDGLGSFGAFGPEGPDSFRPDGPCHFAPDKPPFRGPSFGDEGFGIPPDRID
GFSSNFPPPGYEGPPERFIRGGRRGRGRGRGRGRDGPEFFPRDDFGPPVMDEGYGPPMRE
EFGPPLRSDYGPPMRDDFGPPIRDDFGPPIRDDFGPPMRDDFGPPMRDDFGSRGMRMRGR
GFFGRGNGPRGRGAASFREGPSGFNADFDGGPPEFFRGGPRGRPFVDPFHHRGRGRGFRG
GRGRHEFADGPPPDFFNGPPGTHFESGPPYEDAPPFGEVRTQSADFGSEPDGRKDRSTRK
ERLSRWEGEPEQGEVNQNVETLPACPDGGGTPLRDEIDDCGQEIDFPATQAADEKVDPIP
DQEVLLSDSAGGEIAENLPVE
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaagccttcaatgcggagctttcagctttatatgaagtgaagcctcca
atatcaaaagccaaaatgactgccctaactagaggagctataaaagctattaagttctac
aaacatgtggtccagagtgtagaaaaattcattctcaaatgtaagccagaatacaaagta
cctggtctttatgtgatcgattcgatagtgagacagtctagacaccagtttggtgctgag
aaagatgtttttgcacccagattttcgaagagtttgcagcagacttttgtcaacttattt
aaatgtccccctgaagataagagcaaaattatcagagtgttaaatttgtggcaaaagaat
caagtatttgcccctgaagtgattcagcctttgtttgacttggctgatccaaataatccg
atacatcagcaaatacagcagcaaagcacacctattcagcaaacgaatggagcgcagtcc
caagtcgcaaaaggttctcctgctctacaaagaacacccaccaaagtcaaccagcctaca
tcatcggagacacctgcagctaatttgaacctaaccgatccagtgttgcaacaactgcag
catcttcaacgtttgctatccaaaggagcggacgctgctacggtcagggctgagcaagtg
catttcgacaaaaaacttctcgactttgattatggcgatgatgaggaagaagtaaatccc
agtccaagaccgacccagtccggttcatcatctgccgacccagtagctagccttctgact
aatccagaagtgctgaggcaacttcagacactgcaaagcacattggcaggcgctgtgaac
ccaccgtctgtagaatcagagaatgaccgaatgaagaaattacatgaaatgaagctgcaa
gaagatgaatttgataaacgtttagctcaaactgtgcctaacctacctttcgcagccgag
tgtgacttcaagttaagttcaacgacgagtatgatcggggggcttcatttcattgcacct
caaccagagatccaaataggacaaggatacgaaatccagaatgatactaatacattttat
ggtagtcagcctgtcaccaatgaagttgaagtaatcaacttggatcatgatgattcacat
tcagaagatgaacgatacaaacggaaaagaagccgttcacgatcacgcgatagaggcaga
gaaaaagacagacgacgaagaacgagaagtagatctagatctaggggtagaaggcatagg
tctaaatctaaagataggaaagaaaaggagaagcgcgaaaagcaaaaggaaacagaaaag
gacaaggagcgaaaaaaaagagggttacctgctatgaaaagcaacaatttgagcgtgtgc
agcactactttgtgggtggggcatctttccaaattagttcaccaagatgatctgtcaaat
accttcggcgaatttggtgatattgtgagtatcgatttaatatcacctcgaggatgtgcg
tttattgttatgcatcggaggcaagacgcagcaagatgtcttgcaaaattgaaaaactat
aatctacatggaaaagccataacgattgcttgggctcctggaaagggagtgaaaggcaaa
gatctaaaggattattgggaaggtgatttaggagtgtcttatatcccatataacaaactt
aggccagacatggatttggaagctttggaagacggtggtatgatcgatgaagattctatg
cctgattggatgaagatgaaagttgaagaaagtgcaaagaagaaagttgcagatttgaca
ccatttttaatgggagctggtgacacatctaatcattcaacaatcgataccagccagcct
cctccactcccaccttctagtctcatgcaacccccaatgctctctatggtaaatccgttt
caaatgaataaccgatttttgagcatgattcctaacatggcaaacttggctaatttgcca
ttgggagtgccgccacccaatatggcacctccttctataatgtctaatttgggattagga
gtcgggtcgccttttcaaggacctcccgggtttattccgcctggaatgccgcctccacag
cagcaagagcaaaagccaaatgcacaaccttcctcagatgtaaaactgcgtaatctgagc
gagtctttaatgaacttgacggggcaaccgttgggtttaccacctcaacttccaacgcat
cttccgcctccgcctttgcattcgcttatggacgatagtatggacgttgaaatggaagat
gcagtacatccggacttgaacaaaccgccaccaaatattgcattgagcgatcagcttcaa
gctgcactgaatgtcccttttattagagacaacaggcgagatgactctcgcttctcacct
tccaggagagatggacgagataacaagagagatcgcagcaatgaaagaggtcggaggagg
agtaggagcagggaacgagatcaaaacagagaccgggatagaaatggagcacgtgatcgc
gagcgtcgagatagagacagggatttcagcagaggcggccgagatagagatcgccgtggg
ggcgacagagatcgtgttaatagatggggtgcagtagatcgcagagatgaccgaggttcg
tcggatcgtcgagatagtggttatgatcgccgcgcaggtcctcttggtcgacgtgataca
aatgatagacgagacgattcttttgagaggagagatgcggctcgatctactgaacggaga
gattctgttgatacgcgagagaaaaatgacagatcaaaaacacttaatgaccgacttaaa
gaaatggctggtattaacttcgataacgcggcggatcaaagcgaacggaaagcttctccc
cgaaatctaggagcttccgaggcaaaagctgattctccaaaggaaggaggattacgtttt
gaaccacctgttagtgtttcagaagacattttttcaagtttaccacctgagaccggacga
gaagatagatcatccacggatttagtacgaaatccaagtccgcccgataataaatcagct
gatttaaataacgaaggagtacctcaaggcaataatgaatcatcagttactccatgcaat
gaaaatgaagatagtctacagttattgacctcgtcaagaggaattgagttgggttctgat
ttgcaagattccaagcaatttggtcgagaaagatatgaaactggtggttctaaagaattc
ggctttggcggaccgagatcatttgatggggatggattaggctctttcggcgcttttgga
cctgaaggaccggactcctttaggcctgacggtccgtgtcattttgcacctgataaacct
ccatttagaggtccttcgtttggagatgaagggtttggaattcctcctgatcgaattgac
ggatttagttctaattttccaccacccggatatgaaggacctccagaaagatttatcaga
ggtggtagaaggggtcgaggacgaggtcgtggaagaggaagagatggtccagaatttttc
cctcgtgacgattttggtccccctgtaatggatgaaggttatggcccaccaatgcgcgaa
gaattcggacctccactgagaagcgattatggcccgccgatgagagatgattttggtccg
cctattcgagacgattttggtccgccaattcgagacgattttggtccaccgatgagagac
gattttgggccaccaatgagagacgattttgggtcgagaggtatgcgaatgcgtggaaga
ggattttttggtcgcggtaatggcccgagaggcagaggagcagcgtcgttccgagagggt
ccatctggattcaacgccgattttgatggaggtccacctgagttcttcaggggaggccct
aggggacgcccatttgttgatcctttccaccatcgtggaagaggtcgtggttttagagga
gggcgaggacggcatgagtttgcagatggtcctcctccagattttttcaatggaccccca
ggaacacattttgaaagtggtcctccatatgaggatgctcctccgtttggagaagtacga
actcaatctgcggacttcgggagcgagcctgatggacgcaaggatcgaagtacacggaag
gaaagactttcccggtgggaaggtgagccggaacaaggggaagttaaccagaatgttgag
acattgcctgcttgcccagatggtggtggcactcctttgcgtgacgaaatagacgactgt
ggacaggaaattgattttcccgcaactcaagctgctgatgagaaagtcgaccccattcct
gatcaagaggtgttactttcagactccgcaggtggagagattgccgagaaccttcccgta
gaatga
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integrated database retrieval system
