Dendroctonus ponderosae (mountain pine beetle): 109543106
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Entry
109543106 CDS
T04899
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpa03036
]
109543106
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dpa00535
]
109543106
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109543106
Meiosis-specific proteins
Cohesin complex and associated proteins
109543106
Proteoglycans [BR:
dpa00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
109543106
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
Rod_CreS
AAA_29
FtsK_SpoIIIE
CCDC39
Motif
Other DBs
NCBI-GeneID:
109543106
NCBI-ProteinID:
XP_019768204
UniProt:
A0AAR5Q4M2
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MYIKQVIIQGFKSYRDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEYSHLKPEQ
RQSLLHEGTGPRIVTAYVEIIFDNSDSRLPIEHEEIFLRRVIGAKKDQYFLNKKIVPRSE
VMNLLESAGFSSSNPYYIVKQGKILQMATAPDTHRLKLLREVAGTRVYDERKAESVGLFK
ETEGKIEKIREFLTTIEEKLSTLEEEKEELKQYQHHDKIRRALEYIIHEVELNDNKKKLA
DLEKHRDQSGSEQKKLAGDLKVAQDKIKAFSKKIKEMKKELATFKEERDILSNDHQHLIK
EKTKLDFNIKDLSEELQGDNKSKERAENELARLTQTIKEKEAELEKIKPLYEERKAREEE
CTRELALKEQKRKELYAKQGRGSHFKSKEDRDKWIQGELKSLNKQIKDKKDHKDKLEADL
KRDALKTVELQKKIEEQSQELERQKNYIDDYNKQCYELKKNKDQFQATRNELWRKENNVQ
TNLSSLKDDLAKADQQLRSMVGKPILNGRDSIRKVLDTFIARGGKDLEIVQGYYGPVIEN
FECEKSIYIAVEVTAGNRLFHHVVENDKIGTRILMEMNKQALPGEVTFMPLNRLNVREQD
YPNDADAIAMVSKLLYKKKYDQAMRYLFGKTLICRHLDAATKLARSTGLDCVTLDGDQVS
SKGSLTGGYFNTSRSRLEMQKNRGETIAQIQQCEKELKTLRTELGKTETTINTIVTDMQK
IETKNSKAKVIYDKVKVDLRLMKEELSNIEKFRVPKERSLAQCKSSLEAMQTTKENLESE
LHQELLSSLSVADQQQVDTLNDDIQRLQKENKEAFSTRMKLEAEKNKLENLLTNNLIRRK
DEVLHALQEISLEDRKRQLINCKSELEEIDKKIEKVNKELNSIEIKIKDMSKKLKQEQIE
LEECKRKEKDAQDRIDEDAKHLEKFASKQNLLEAKIQESVEKINQLGALPTQDLYKSFAK
MSYKALFKELEKTNTQLKKFCHVNKKALDQFMSFSDQKEKLQKRMEELVRGGARIQELIE
VLEQRKVEAIQFTFKQVARYFSEVFKKLVPAGKAKLVLRTADSEEGRDITPEDTNSDIFQ
GIGVRISFTDADVEMKEMNQLSGGQKSLVALGLIFAIQKCDPAPFYLFDEIDQALDAQHR
KAVANMIHELSKDAQFITTTFRPELLEHAHKFYGVKFRNKVSHVECVTRDVARDFVEDDT
THG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcattatacaaggctttaaaagctatcgggatcaaactgtggta
gaacctttcgacaaaagacacaacgtggttgtgggaagaaatggatcgggaaaaagtaac
tttttctatgctattcagttcgttcttagtgatgaatattcccatttaaaacctgagcaa
agacaatctttactgcatgaaggcactggacctagaattgttaccgcatatgtggagatt
attttcgacaactcagattcccgtcttccgatcgaacacgaggagattttcttgcgtcgt
gtcattggtgcgaaaaaggaccaatactttttgaacaaaaaaattgtcccaagaagtgaa
gtgatgaatcttttagaatcggccggcttttcaagttctaacccttactacatcgtcaag
caaggaaaaatcctgcaaatggctactgctcctgatacgcaccgtctcaaattgctacga
gaagtagccggaaccagagtatatgacgaacgaaaagcagaatcagtaggtttgtttaag
gagaccgaaggaaaaattgaaaaaattcgagaatttttgactacaattgaagaaaaattg
tccactttggaggaggaaaaagaagagttgaaacaataccaacatcacgacaaaattaga
cgagcacttgagtatattattcatgaagttgaactgaatgacaacaagaagaagttagct
gatttagagaagcatcgtgatcagtccggatcggaacagaaaaaattggcaggcgattta
aaagtagcgcaggacaagataaaagccttttccaaaaaaattaaggaaatgaaaaaagag
ctggcaacgtttaaggaggaacgtgatattcttagtaacgatcatcagcatttgatcaag
gaaaagactaaattagattttaatatcaaagacttatccgaagaactacaaggcgacaac
aagtcaaaggaaagagccgaaaacgaattagcccgtctcacccaaacaatcaaagagaag
gaagccgaattggaaaaaattaaacccctgtatgaggagcggaaagctcgcgaagaggaa
tgtactagggaattggccttaaaagagcaaaaacgcaaagaactatatgccaaacagggc
aggggtagccattttaagtctaaggaggatcgcgataaatggattcaaggcgagttgaag
tctctcaacaaacaaataaaagacaaaaaggatcacaaagataaattggaagccgatttg
aagagggatgcgttaaagacggtcgaacttcaaaagaagattgaagagcaatcacaagag
ttggaacgtcaaaaaaattacatagatgactacaataaacaatgttacgagctgaaaaaa
aataaagatcagtttcaggccacaagaaatgagctgtggcgcaaagaaaataatgtgcaa
accaacctatcgtcgctcaaagacgatctcgccaaagcagatcagcaattacggtctatg
gttggaaagccaattttaaacggcagagatagtatcagaaaagtactagatacttttatt
gcgcgaggtggtaaagacttggaaatcgttcaaggttattatggtccagtgattgaaaat
tttgaatgcgaaaagagtatttacatagccgttgaagtaaccgctgggaacagattgttt
catcacgtcgtggagaacgataaaatcggaactagaatcctgatggagatgaataaacag
gcattgcccggtgaagtaacattcatgcctcttaataggctgaatgtaagagaacaggat
tatcccaatgatgcagacgcaattgcaatggtttcaaagttgctttacaaaaaaaaatac
gaccaggcgatgaggtatctgttcggaaagacactaatttgcaggcatttggatgcagcc
acaaaacttgcaagaagcacaggacttgactgtgttactctcgatggagaccaagtctca
tctaaaggctcactaaccggtggctacttcaacacctcacgatcgcggttagaaatgcaa
aaaaatcgaggagaaacaattgcacaaatacagcagtgcgaaaaggaactgaaaacacta
cgtactgaactgggcaaaactgaaaccaccataaacacaattgtcactgatatgcagaaa
atcgaaaccaagaacagcaaagctaaagtgatctacgataaagtgaaagtggacctacga
ttaatgaaagaagaactttccaacatcgagaagtttcgtgtgcccaaagaacgatccctc
gcacaatgtaaatcgagtttggaggcaatgcaaaccaccaaagagaatttggagtctgag
ttgcatcaggaactattatcgtctctgtcggtcgccgatcagcaacaggtcgacacatta
aatgacgacattcaaagactacaaaaagagaacaaagaggctttcagtacaagaatgaaa
ttggaggcggaaaagaacaaactggaaaatttgctgacgaataatctgattcggaggaaa
gatgaagtcttacatgctttacaggaaatttcattagaagacagaaaacgtcagttgata
aattgcaaaagtgaactggaggaaattgacaaaaaaattgagaaggtcaataaggaattg
aattcaatcgaaataaaaattaaggacatgtcgaaaaagttgaaacaagaacaaattgaa
cttgaagaatgcaaaaggaaagagaaggacgcccaagacagaatcgacgaggatgcaaag
cacttggagaaattcgcttcaaagcaaaaccttttggaagcaaaaattcaagaaagtgtc
gagaaaattaatcagttgggtgcattaccgacccaagatttatacaagagttttgccaaa
atgtcgtataaagcgctctttaaagaattggaaaagacaaatacccagctgaagaagttc
tgccatgtgaataaaaaagcgctagatcagtttatgagtttttccgatcaaaaagagaag
ctccaaaaaagaatggaggaactagttagaggaggcgctagaatacaagaactgattgaa
gttttggagcaaaggaaagtcgaagccatccagtttacatttaaacaagttgccagatat
ttttcagaagtttttaagaaactggttccagctggtaaggctaaattggtgcttcgtact
gccgacagtgaggaaggcagagatattactccagaggacaccaattctgacatctttcaa
ggtattggtgtaagaatctcgtttacggatgctgacgttgaaatgaaagaaatgaatcaa
ttgtctggtggacaaaaatcattggtagctttgggattgatttttgccattcaaaaatgt
gatcccgcgccattctacttgtttgacgaaatcgatcaagcattagatgcccagcacaga
aaagcagtagccaatatgatccatgaactctccaaagatgcacagtttattactacgacg
ttccgaccggagctattggagcatgctcacaaattctatggagtcaaattccgaaacaaa
gttagtcacgtagagtgtgtgactagagacgtagcacgcgattttgtagaagatgataca
acccatggttaa
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