Dendroctonus ponderosae (mountain pine beetle): 109543146
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Entry
109543146 CDS
T04899
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109543146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109543146
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109543146
mRNA degradation factors
5'-3' decay
Lsm complex
109543146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109543146
NCBI-ProteinID:
XP_019768264
UniProt:
N6TSW2
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MNKIELEGTAHLLDELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGKEYGD
IPRGIFIVRGENVVLLGEIDIDREDKLPLTEISVDDVLDAQRKEQELHIEKQRLISKALK
ERGLQMNADLVQDDLY
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagatagaattagaaggaacagcccatttgcttgatgagcttgacaaaaaactt
atggttttactgcgcgatggtaggaccttaataggctacttgagaagtgtagatcagttt
gcgaatttagttctacataaaactatagaaaggattcatgttggcaaggaatacggtgac
ataccccggggaatttttattgtacgaggagaaaatgttgtgcttctaggcgaaattgat
atagacagagaggataaattaccgctaacagagatctcggtggatgatgttttagatgca
caaagaaaagaacaagagttacatatcgaaaaacagcggcttatttcaaaagctctaaag
gaaaggggtctgcaaatgaatgcggatttagttcaagatgatttatattaa
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integrated database retrieval system
