Dendroctonus ponderosae (mountain pine beetle): 109543459
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Entry
109543459 CDS
T04899
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109543459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109543459
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109543459
Spliceosome [BR:
dpa03041
]
Complex C
Other components
Step II factors
109543459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
AAA_22
DEAD
WHD_HA2
AAA_19
Flavi_DEAD
AAA_30
nSTAND3
Sigma54_activ_2
T2SSE
Cas3-like_C_2
nSTAND_NTPase5
TsaE
AAA_16
UvrD-helicase
AAA_7
PhoH
NB-ARC
Motif
Other DBs
NCBI-GeneID:
109543459
NCBI-ProteinID:
XP_048518718
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MKDVDQVSGRDLNPLSHAPQEREDKDRNPDRPTHNATSVLRLPVSLDENEEDSRKRVTRL
SSPERWEIKQMISSGCIDKSELPEFDDETGLLPKEQEDGEADIEIELVEDEPPFLNGHGR
AVHDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREAEVDAQPAGKSKTWIDPLP
ADEAKTQPARGIGLQAQDLPEWKKHVIGGKKSSFGKKTNLTIVEQRQSLPIYKLKEELRK
AVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGC
RLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMDLDLKGYAVVMLDEAHERTIHTDV
LFGLLKQAVTKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDY
LDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPEVPELIILPVYSAL
PSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVV
TPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMG
INDLLHFDFMDAPPVESLIMALEQLHSLSALDDEGLLTRLGRRVSSLTLTQQFFAFFTEL
SSAFWRPYNQFTPV
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtcgaccaggtgagcgggcgcgacctcaacccgctgtcgcacgcccctcag
gagcgcgaggacaaagatcggaaccccgaccggccgacgcacaacgccacctcggtgctg
cgcctgccagtcagtctggacgagaacgaggaggactcgcggaagcgcgtgacgcgcctc
tccagccccgagcgctgggagatcaagcagatgatctcctccggctgcatcgacaagagc
gagctgcccgagttcgacgacgaaacggggctgctgcccaaagagcaggaggacggcgag
gccgacatcgagatcgagctggtggaggacgagccgcccttcctcaacgggcacgggcgc
gccgtgcacgatctgagccccgtgcgcatcgtgaaaaaccccgacggctcgctggcgcag
gccgccatgatgcagtcggcgctggcgaaggagcggcgcgagcagaagatgctgcagcgc
gaggcggaggtggacgcgcagccggcgggcaagagcaagacgtggatcgacccgctgccc
gccgacgaggccaagacgcagccggcgcgcggcatcggcctgcaggcgcaggacctgccc
gagtggaagaagcacgtgatcggcggcaaaaagtcgtcgttcggcaagaagacgaacctc
accatcgtggagcagcgccagtcgctgcccatctacaagctgaaggaggagctgcgcaaa
gcggtcaccgacaaccagatcttgatcgtgattggcgagacgggctcgggcaagacgacg
cagatcacgcagtacctggcggaggcggggtttacggcgcgcggcaagatcggctgcacg
cagccgcgccgcgtcgccgccatgtcggtggcgaagcgcgtggctgaggagttcggctgc
cggctgggccaggaggtcggctacaccatccgcttcgaggactgcaccagcccggaaacc
atcatcaagtacatgacggacgggatgctgctgcgcgagtgcctgatggatctggaccta
aaaggctacgccgtggtgatgctggacgaggcgcacgagcgcaccatccataccgacgtg
ctcttcggcctgctgaagcaggccgtcaccaagcggcccgagctcaagctgatcgtcacc
tccgccacgctggacgccgtcaagttctcccagtacttcttcgaggcgcccatcttcacc
atcccagggcgcaccttcccggtggaggtcctctacaccaaggagccggagacggactac
ctggacgccagcctgatcacagtgatgcagatccacctgcgcgagccgcccggcgacatc
ctgctgttcctcaccgggcaggaggagatcgacaccgcctgcgagatcctctacgagcgc
atgaagtcgctggggccggaggtgcccgagctgatcattctgcccgtctactcggcgctg
ccctccgaaatgcagacgcgcatcttcgacccggcgccgcccggcagccgcaaagtggtg
atcgccaccaatatagccgaaacgtcgctcacgatcgacggcatcttctacgtggtcgat
cccggcttcgtcaagcagaaggtctacaactcgaagacgggcatggactcgctggtggtc
acgcccatctcgcaggcgcaggccaaacagagggcgggccgcgcaggccgcaccggcccc
ggcaagtgctaccgcctctacaccgagcgcgcctaccgcgacgagatgctccccactccg
gtgcccgagatccagcgcaccaatctggcaacgacggtgctccagctgaagacaatgggg
atcaacgatctgctgcacttcgactttatggacgccccgccagtcgagtcgctcatcatg
gccctggagcagctgcactcattgtccgccctggacgatgagggcctcctcaccaggctg
ggcagacgcgtaagttcactcacactcactcagcaatttttcgcattttttaccgaactt
tcatcggccttctggagaccgtacaatcagtttacgccagtttga
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