Dendroctonus ponderosae (mountain pine beetle): 109543587
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Entry
109543587 CDS
T04899
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109543587
03009 Ribosome biogenesis [BR:
dpa03009
]
109543587
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109543587
Spliceosome [BR:
dpa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109543587
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
Pre-60S particles
Helicases
109543587
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
109543587
NCBI-ProteinID:
XP_019768939
UniProt:
N6T3E7
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MDNSKYKDLMPPISEDAEAPDSSEESADENEFQPSKRQKIKNKVFADDFEFVSSVEEYNK
DPWNDIKKYVKRKAKYKTDDKIRSALKRESEANQNQSDSEISLSDDELKHDRITEKLKRK
KKIDKLEDTTEYEKPFEPTSYEDTTFYEMNLSKPLLKAISDMRFAHPTPIQSATIPVALL
GRDICGCAATGTGKTAAYMLPTLERLIYRPMKNAAITRVLVLVPTRELGVQVYQVTKQLS
QYSDIEIGLAVGGLDLKTQESVLRKKPDIVIATPGRLIDHLKSTPTFGLESIEVLILDEA
DRMLDEYFAEQMKEIVRQCARTRQTILFSATMTDEVENLAAVSLVDPVRLFVDSNKDVAF
NLRQEFIRIRTGLEEDREAILGALVRRTFRESCMIFVQTKKQAHHIHILLGMLGLKVAEL
HGNLTQPQRLEALDKFKNKEVDVLVATDVAARGLDIPGVKTVINYAMPSILEHYIHRVGR
TARAGRAGVSVSLAGEKDRKMVKSIIKRAKYPVKNRVIPQDILEKYRQKIKSLQPQIEDI
LREEEEERLLRKAENQANKAEKMLAGIKDPERPWFQTKQERKKENVKLKASTALKNAKDK
PKKVKKVRDEDEEKMLKVQAMQARSFKKKHKPKKIYAVGEDKGFNKGKGNAKKRKSHFGD
LVNVNQAKKLRHQSKFEQKKVGKNRK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggacaatagtaaatacaaggacttaatgcctcctatttcggaggatgcagaggcgccg
gattcatcagaggaatctgccgatgaaaacgagtttcaacccagcaagcggcaaaagatc
aagaacaaagtgtttgctgacgactttgaattcgtgagcagtgtggaggaatacaacaaa
gacccttggaacgacattaaaaagtacgtgaaaagaaaggccaagtacaagactgacgac
aagatccgatcagcgctaaaacgtgagtctgaagccaatcagaaccagtcggactcagaa
atcagcctgtccgatgacgagctgaaacacgaccggattactgagaagctgaaaaggaaa
aaaaagatcgacaaactagaagatacaactgagtatgaaaagccgtttgagcccaccagt
tacgaggacaccacgttttatgaaatgaacctgtccaagccgctgttaaaggccatatcg
gacatgaggtttgcgcacccgactcctatccaatctgcaacgatccccgttgccttgcta
gggcgcgatatttgtggctgcgcagccacagggacgggaaagactgccgcctacatgctg
cccactttggaaaggctcatttatcgaccaatgaaaaacgccgcaattaccagagtttta
gtcttggtcccaactagagaactaggcgttcaagtgtatcaagtcaccaaacagttgagt
caatattcagatattgaaatcggcttggcggttggtggtttggacttgaagacccaggaa
agtgttctgaggaagaagcccgacattgtaatagccactcccggtcgtttaatcgaccat
ctaaaaagtactcccacttttggtttggaatccatcgaagtcttgattctggacgaagct
gaccgtatgctggacgagtatttcgctgaacaaatgaaggaaattgtcaggcagtgtgct
cggacgagacagacgattctattttctgccacaatgaccgacgaagtggaaaatttggct
gcggtttccctagtcgatccagtcaggctgtttgtggacagcaacaaggacgtggctttc
aacttgcgacaggagtttattagaatcagaactggattggaggaagatagggaggcaatt
ttgggagctttagtgcgccgaaccttccgcgaaagttgcatgattttcgtccaaaccaag
aaacaggctcatcacattcatattctgttgggaatgttgggccttaaagtggccgaactt
catggaaatttgactcagccgcagcgtctggaggcgctggataaattcaaaaataaagaa
gtggatgtattggtggctactgatgtggctgctagaggcttggacattcctggcgtcaaa
accgtaatcaattacgcgatgccttcaatcttagagcactatattcaccgagtcgggcga
acagccagagcagggcgcgctggcgtttcagtcagtttggctggtgaaaaggacagaaaa
atggtaaaaagcatcatcaagcgtgcgaaataccccgtaaagaaccgagtaataccacag
gatattctggaaaaatacaggcaaaaaataaagtcccttcaaccgcaaatcgaagacatt
ttgcgcgaagaggaggaagagcgactgctgcgtaaagccgaaaaccaggcgaataaggca
gagaaaatgttggctggaatcaaagacccagaaaggccgtggttccaaacgaagcaagaa
aggaagaaggaaaacgtcaagctgaaagcgagcactgccctgaagaatgcaaaggacaaa
cccaaaaaggtcaagaaggttcgggacgaagatgaggagaaaatgctgaaggtacaagcg
atgcaagcgaggagcttcaaaaaaaagcacaaacctaaaaaaatatacgctgttggtgaa
gataagggcttcaataagggaaagggcaacgccaagaaacgaaagtcgcatttcggcgat
ttggtcaatgtgaaccaggcgaagaaactgagacaccaatcaaagtttgaacagaaaaaa
gtgggcaaaaatagaaagtag
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