Dendroctonus ponderosae (mountain pine beetle): 109543876
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Entry
109543876 CDS
T04899
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpa03009
]
109543876
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109543876
Ribosome biogenesis [BR:
dpa03009
]
Eukaryotic type
Pre-60S particles
Helicases
109543876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
MAJIN
Motif
Other DBs
NCBI-GeneID:
109543876
NCBI-ProteinID:
XP_019769359
EnsemblRapid:
LOC109543876
UniProt:
N6SVI4
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MPKKWETLGVSIHPELRNAIQSLNFPFMTPVQAATIPQMLNKKDVAAEAVTGSGKTLAFL
IPILDILKARETDGPWQKHQIGALVISPTRELALQIKEVLDQLLCSITNLKPILFVGGNS
VDDDVHNFKEHGGNVVICTPGRLEDLLTRRLDINLPNAVKKLEVLVLDEADRLLDLGFQK
TIDTILSYLPRQRRTGLFSATQTKEVQDLIRAGLRNPVLISVSAKAKQSTPDMLENFYIL
AKNDGKLASLLTFLQQKHIQKAMLFLPTCACVDYWSKIFSHVLPKELELPVLAIHGKLKE
KRKKVLDTFRDSEKALLLCTDVMARGIDVPEVEWVLQWDPPANAAAFVHRVGRTARQGHM
GSALIVLLENEESYVNFIETNQRVKLIPVEDMAEKDCIDVLREKIRSLLKKDRALMELAT
RAFVSHVRAYSKHECSLLLRVKELPLGALAATYGLLQLPKMPELKHRDLSDFPVVEDLDA
NTIPYKDKQREAMRKKKLGEFQSTGVWPGKKTKHIKKDTEAWSIAKQNKETRKEKRSKRK
QAKEAAKNAGKGKKRKGGITEEDLEELKKDIALLKKFKKKKITDEQYEQAIGLE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaaaatgggaaactctgggtgtttccatacacccggaattgcggaatgccatc
cagagcctaaatttcccattcatgactccggtacaggctgcaaccattccccaaatgcta
aacaaaaaagatgtggcagctgaagctgtaacaggctccggaaagactctggccttccta
atccccattctggacattctgaaggccagggaaacggatgggccttggcaaaagcaccaa
attggggccctagtgatttcgcccactagagagctggcgcttcagatcaaagaggtgctc
gatcagctgctgtgcagtataacaaatttaaagccaattctgtttgtgggaggcaacagt
gtggacgacgatgtgcataacttcaaagagcatgggggcaatgtagtaatctgcactccc
ggtcgcttggaggacttgttaacgcgacgactggacattaacctgccaaacgccgtgaaa
aaactggaagtgctggttttggatgaagcggaccgactgctggatttggggttccagaaa
accattgacacgatcctcagctacctgcccaggcagaggagaactggacttttctcagct
acgcaaaccaaagaagtgcaagatttgattagggcaggcctcaggaacccagtgctcatc
agcgtatcggccaaggcgaagcaaagcactccagacatgctggagaacttctacatccta
gcaaagaatgacggcaaactcgcctctttgttgacctttcttcagcaaaagcacattcaa
aaggccatgctattcttgccaacttgtgcctgcgtggattactggtcgaagatattctcg
catgtgctcccaaaggagctcgagctaccagtgttggcgatccacggcaagttgaaggag
aagcgcaaaaaggtcctggacacctttagagacagcgaaaaggccttgctgctgtgcaca
gatgtaatggctagaggaatcgatgttccagaggttgagtgggtgcttcaatgggacccg
cctgctaatgctgccgctttcgtgcatcgtgtcggaagaactgcacgacagggccacatg
ggcagcgccttgattgtgctgctggaaaacgaagagtcttatgtgaatttcattgaaacc
aaccaaagagtaaagctgattccagttgaagatatggcagaaaaagactgcatcgacgtg
ctaagggagaaaattcgaagcctcttgaagaaggaccgcgccttaatggagctggcaacc
agagcatttgtatcgcatgtccgagcttattctaagcacgagtgctcgttgctgctcaga
gtaaaggagcttccccttggggctctagcggccacctacggactgctacagctgcctaaa
atgcccgaactgaagcacagagatctctcagactttcccgtggttgaagacctggatgcc
aacacaattccctacaaggacaagcaaagagaggccatgcggaagaagaaattgggggag
tttcaaagcactggtgtttggcccggtaagaagacgaagcacataaaaaaggacactgag
gcgtggtcaattgccaagcagaacaaagagacgcgaaaggagaagcgatcgaaaaggaag
caggcgaaggaggccgcgaagaatgctggcaaaggcaaaaagcgcaaaggtgggataact
gaagaggacttggaggagctgaaaaaggacatagccttgctgaagaaattcaaaaaaaag
aaaatcacagacgagcagtatgaacaggcaattggcctggaataa
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