Dendroctonus ponderosae (mountain pine beetle): 109543920
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Entry
109543920 CDS
T04899
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03015
mRNA surveillance pathway
dpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109543920
09123 Folding, sorting and degradation
03018 RNA degradation
109543920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109543920
03041 Spliceosome [BR:
dpa03041
]
109543920
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109543920
mRNA cycle factors
Stress granule specific factors
109543920
Spliceosome [BR:
dpa03041
]
Complex C
Other components
Complex C specific factors
109543920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
OB_RNB
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
109543920
NCBI-ProteinID:
XP_019769412
UniProt:
N6TR22
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MSNIPQPIVIFPSGSLYVGDLHPDVTEAMLYEKFSSVGSLASLRVCRDSRTKQSLGYGYV
NFSTTLEAETVLDTMNFDLLKGKPIRIMWSQRDPTLRKSGIGNLFIKNLDKNIDNKAMYD
TFSAFGHILSCKVALDDDGCSKGYGFVHFETEDVANKAIEKVNGMLLNGKKVYVGKFIPR
AEREKELGEKSRQFTNVYVKNFGQIMPDEKFHELFSQFGNVTSSLVARHPDGTSKGFGFV
AYDDPKAADLAVSEMNGRDYDGRTLYVGRAQKKAERLNELRKRYELERIERFTKFQGVNL
YVKNLDDIFTDEKLKAEFECFGEITSAKVMKENGRSRGFGFVCYTAPEEASKAIQEMNGK
IVGSKPLYVAMAQRREARRAFLTTQYVARAHAARQQGGLQFTGGPSYLLSAVAQGPRLFG
PAPTMRPAPRWSTLQALPRPPNGPHFGMPLLPTSPYRTSARPAPMRTHARPITGSSGPTA
RPNSKYTTRHGPEVSITDPRLNHAAPQEQKQIIGEQLFSIVEKLKPELAGKITGMLLEID
NSELLNMIKNHESLRAKVEEAIAVLEAHKASNKGVAVQD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacattccgcagccaatagtaatttttccttcggggtccctgtatgtgggcgat
ttacaccctgatgtcactgaagcgatgctttatgagaaattttccagtgtaggatcattg
gcctcgcttagagtatgtcgcgactcccgaaccaagcaatcccttggctatggttacgtg
aacttcagcactactctggaagccgaaaccgtattagatacgatgaattttgatctattg
aaaggcaaacctatcaggattatgtggagccaacgggaccccacattgcgaaagtctggc
attgggaacttgttcatcaaaaatctggacaagaacatcgataacaaagccatgtacgat
acgttttccgcattcggacacatcctcagctgcaaagtggctctggatgatgatggatgt
tcaaaggggtatggattcgtgcactttgaaaccgaggatgttgcaaacaaagcaattgaa
aaggtcaacggcatgttgctcaacgggaaaaaggtgtatgtgggcaagtttataccgaga
gcggagcgtgaaaaggagttgggagaaaaatcaagacaattcaccaacgtctatgtgaag
aacttcggccaaattatgccggacgaaaagttccacgagctgttttcccaatttggcaac
gtgaccagcagcttggtcgctcgtcatccggatggaaccagcaaaggctttggatttgtg
gcttacgatgatccaaaagccgccgatttggcagtttcagaaatgaatggacgggattat
gatggtcgcactttgtatgttggccgcgcgcagaaaaaggctgaaaggttgaacgaattg
cgaaaacgatacgaactggagagaattgagagattcacaaagttccaaggtgtcaacctt
tacgtgaagaatctggatgatatttttaccgatgagaagctcaaggcggaatttgagtgc
tttggcgagattacgtctgctaaggtgatgaaagagaatggtagatctcgtggatttggc
ttcgtgtgttacacagcgcccgaagaagctagcaaggccatccaggaaatgaatgggaaa
attgtgggctccaagcccctctatgtcgcaatggcgcaaagaagggaagctagacgagca
ttcctgacaactcagtatgttgcaagggctcatgcagccagacaacagggaggcctccaa
tttacgggcgggccttcctatctgctctccgccgtggctcaagggccccgcctatttgga
cctgctcccactatgcgcccagctcctagatggtcaacattgcaagctctccctcgcccc
cccaatggacctcactttggaatgcccctattaccaacgtcgccttacagaacatccgcc
agaccggcccctatgcggactcacgcgcgtccgataactggctcttccggtccaacagca
cgtccaaattccaaatacacaaccaggcatggcccagaggtctcaataactgaccctaga
ttaaaccatgcggccccacaagaacaaaagcagattataggcgaacaattatttagcatc
gtggaaaagcttaaaccagagctggcagggaaaatcacaggaatgctactggaaatcgac
aactcggagctgctcaatatgatcaaaaaccatgaatctcttagggcgaaagttgaagaa
gcgatagcggttttggaggcgcacaaagcaagcaacaagggggttgcggttcaagactaa
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