Dendroctonus ponderosae (mountain pine beetle): 109544065
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Entry
109544065 CDS
T04899
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpa04131
]
109544065
Membrane trafficking [BR:
dpa04131
]
Protein recycling
Others
EARP complex
109544065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
DUF7771
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
109544065
NCBI-ProteinID:
XP_019769645
UniProt:
A0AAR5Q8W8
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MANKMDEFKQKIMGFIHKQPPKIPSMGFDDSNYHFPQMPTLSINSKTAQDSDRPADQDIL
ESIEAAYFSMNPDFDICRFELAKLPETLECDQIQRDFKNLKQQHSVVSKKVLQLILEHQS
ACNNEFKTIQDILQEVKATLDQCKESRKQLAICGKQFSSSLGILANYRKRKLAQRLLGNL
NMIKNLHSFDKRCQELLHDEDYAGAITELKRCQKIAIKYRHFSCVAALTYKLQETLENTD
TQFDRILAQMCYHFDGERYFKLQAAYDLLEKSHVAMIDNIHVHYITAIYNSSFNIVNSYV
SSGDVLDSGDNTGKNPYKTLCQAVPQDYFISCLVQLCKVLFKIVLSYHQLIRWYNNQEEG
TSQNCLGVELNMSKQKLDHNVVKIWDDVQRKVSSLLLNADLAAYKFDQFVQVLRVVHRLI
QVGEEFCSSKSEDLSESIRKQSICYFKNYHAQRLDELKIFMENEMWEICPVKPTFNVVQL
QEFRSVRSALKNYKNPSQISPTMPVYSTNSADCSSCHSQDGSSITGNYFIRYADHGTPFD
TGLDDTVIDEDILAVDNEGSGYFSDDSEEESEELKKDFVDEDNIEANAANIPEGKHSHHK
NAPILTNTTLSVLRQMGKYLQMSRLLKPISYQVISCMNELFDFYLYCVHLFFAYDLTVSS
SNLYTETLSTTLRKISDNLIFEPSSQGTELSFPEGRVHKPCISLMVDLKTPENLHGLSER
IVAVESLIFLSKQYEFLQEYLEYLVPQTNRIMLQQFFTQSISSCSDLRRPVYMAVVAQAF
DLRQILISMSKINWEVKEVMSQHNAYIDMILREVQIFRLRLEDVAHKVSISLEVYKLLWE
NIAHIVTHTLVQGFSDAKKCSNGGRALMQLDFTQFLSKFEKISSLRPVPHKEYVENYVKA
FYLPEIELEKWIREHKEYSSKHLFGLVSCACQNNKKSRQRLLQVIEESERSPLSR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaatggacgagtttaaacagaaaattatggggttcatccataaacagcct
cccaaaatcccttcaatgggattcgatgattcaaactatcatttccctcaaatgcccacg
ttgtctatcaacagtaaaactgctcaagatagcgatagaccggcagatcaagatatttta
gaaagcatcgaagcagcttatttttccatgaatccagatttcgacatatgtagatttgag
ctagctaagctgccagagacgctggaatgcgaccagattcaaagggacttcaagaatttg
aaacagcaacattcagtcgtatctaaaaaagtgcttcagcttatcttggagcatcaaagt
gcttgcaataatgaatttaaaaccattcaagacattctgcaagaagttaaagccacttta
gatcaatgcaaggagagcagaaagcagctggctatttgtgggaagcagttttcatccagt
ttaggaattttggcaaactacagaaagaggaaactcgctcaaaggctgctgggaaattta
aatatgattaagaatttgcatagctttgacaaaagatgccaagaattactccatgacgag
gattatgctggagctataacggaactaaaaagatgtcagaaaattgccataaaataccgg
catttcagttgcgtggcagccctgacttataagttacaagagactttggagaacacagac
acgcaatttgatcgaattttagctcaaatgtgttaccattttgatggcgaaagatacttc
aagctgcaagcagcctacgacttacttgagaagtctcatgtagcaatgattgacaatata
catgtgcattatataactgcaatttacaactcgtcttttaacattgttaattcgtatgtt
tcttctggggatgttttggactctggcgacaacactggaaagaatccctataaaacgctc
tgccaagctgtgcctcaagactattttatttcatgtctagtgcaactgtgtaaggttctt
ttcaaaatagttctaagttatcatcagttaatcagatggtacaacaaccaagaagaaggc
acaagtcagaattgtttgggtgtggagctaaatatgagcaagcagaaactggatcacaat
gttgtgaaaatatgggacgatgtgcaaagaaaagtgtccagtttgctgttaaatgctgat
ttagcagcatacaaattcgaccagtttgtgcaagttttgcgtgtggttcatagattaatt
caagtaggagaagagttttgctcaagtaaatctgaggacttgagcgaatcaatacgaaag
cagagtatttgctattttaagaattaccatgctcaacggctggatgaattgaaaatattt
atggagaatgaaatgtgggagatttgtcctgttaaacccactttcaatgtggtgcagctg
caggagttcagatcggtaagatctgcgttgaaaaattacaaaaaccccagtcagatcagc
cccacaatgccagtgtactcaacaaattctgctgattgttcttcatgccattctcaagat
ggaagcagtattaccggcaactacttcatcaggtatgcagaccatggcaccccctttgat
acaggcttagatgacacggtaatcgatgaggatattttggctgttgataatgagggatca
gggtatttctcagatgatagtgaggaagaatcagaagagctcaaaaaggattttgtggat
gaggacaacatagaagctaatgcagcaaatatacccgaaggcaaacattcgcaccacaaa
aatgccccaattttgaccaacaccactttatcggtgttaagacaaatgggcaaatacctg
caaatgtctaggctactcaaaccgatttcctatcaggttattagctgcatgaacgagcta
tttgacttctatttatattgtgttcatctattttttgcctatgatttgacggtttcaagc
agtaatctttacactgaaacgctctcaacgacgctcaggaaaattagtgataatctcatt
tttgaaccgtcttcgcaagggaccgaattatcttttccggaagggcgggttcataaacct
tgcatatcgctaatggtggatctgaaaacaccagagaacctacatggtttatcggaaaga
atagtcgctgttgaaagtctgattttcctctcaaaacagtacgagtttttgcaggaatat
ttggagtatttggtgcctcaaacaaacaggattatgctgcaacagttctttacacaaagt
atttccagttgctcggatttaagaagacctgtttatatggcagtggttgcgcaagcattc
gatttgaggcagattttaatttctatgtcgaaaatcaattgggaagttaaggaagtaatg
tcgcaacataatgcatacatcgatatgattttacgagaggtgcagatatttaggctgcga
cttgaagatgtcgctcataaagtatcgatttctctagaagtgtacaaactcctatgggaa
aacatagcccacattgttactcacactttggtacaaggattttctgatgccaaaaagtgt
tcaaatggcggtcgagctttgatgcagctggactttacacagtttttatcaaaattcgaa
aaaatctcatcactgcgacctgtgccgcataaggaatatgtggagaattacgttaaagca
ttttatctgcccgaaattgaacttgaaaaatggatcagagaacacaaggaatattcatct
aaacatttattcggcctagtcagttgtgcttgccagaataataaaaaatctcgtcagagg
ttgcttcaagtgatagaggagagcgagagaagtcctctgagtaggtag
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