Dendroctonus ponderosae (mountain pine beetle): 109544474
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Entry
109544474 CDS
T04899
Name
(RefSeq) ribonuclease Z, mitochondrial isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpa03016
]
109544474
Enzymes [BR:
dpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
109544474
Transfer RNA biogenesis [BR:
dpa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
109544474
Prokaryotic type
109544474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
109544474
NCBI-ProteinID:
XP_019770229
UniProt:
A0AAR5QAI6
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MNIFLKPSVFRFVVLLTTRSYSKYRTFDNSNLNLLLTKMPKEPTHIAVAQKQRLKIKQKS
AKYTPGRVTLQILGTGANGAPGSVYLFSDQSRYLFNCGEGTQRLAHEHKTKLAKLEHIFI
TQPKWKNIGGLPGTALTIQDVGVPQITLHGPEGLNEIFPATRRFVVIRDLKINMADCSET
TTFEDNALRVEYVHLHKSVSQSGLEKDVQASVEQSEAGTSTRSEKKRSSSISSRNGESLV
EDDTDYYAHERKKTKRHRSRSRSKSRSPESGRRPAPSAKSISSATQMLLKGFKSEAISMC
YICRLQPRPGALNLDKCVKNGVPPGPLLGLLKNGEDVTLGNGTVVKSVDVCEPDDPGPIF
LVVDCPSADYLESLASNPRMKKHQKFAQFDDDAACLVVHFTPKDVMELPLYKRWMEDFTP
STQHIQVNDSNSCMGSTAVHRIQYKLNLLSPDFFPLLGDRGTPSLCETFGNHQNKKQKSE
DINFANLNLDIAPANNCKTVNENRSIGSLSSYYLRPKKGFDSTSHINLDTQEFIDETMSL
PQFSDALKELHQKLQIEKSNYTIRDYPQVLFLGTGSCIPNKTRNTSGILLQISDTKNILL
DCGEGTCGQITRFFGQEKANKVLTEIDAIYISHLHADHHIGLIGVLQGRRKALDLLRIEK
APLILFAPRQILAWLAFYDRFFENIKDEYVLVPNGELILNETTFADEKRIKILSNLDMSD
ISTCLVRHCPNAFGVSITHESGYKITYSGDTMPSEKLVELGKNSDVLIHEATMEDELAKE
AVVKMHSTTSQAIQVGKDMKAKHVILTHFSQRYAKLPRFNDNFADNVSIAFDNMQVKLDE
LPLVPLLYPALKIMFADHYEQLEHKAVKRQLKAERQAFLEQPKLQQNQS
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttcctaaaaccctccgtttttagatttgttgtgttattaactacaagatcc
tactcaaagtatcgcaccttcgacaattctaacctcaatttgttactaactaaaatgccc
aaagaacctacccatattgctgttgctcaaaagcaaagacttaaaatcaaacaaaagagt
gctaagtacactccgggcagagttacgcttcaaattttgggcacaggcgctaatggagct
cctgggtctgtttacttattttcagaccagagtcggtatctatttaactgcggtgaaggt
actcaaaggttagcccatgagcacaaaacgaagctagccaagttggagcacattttcatt
actcagcccaaatggaaaaatataggcggattgcctggcaccgctttgacaattcaagat
gttggtgtgccccaaatcactcttcatgggcctgagggacttaatgaaatattccctgct
actaggcgatttgtggttattagggatttgaaaattaatatggcagattgttcagaaacg
acgacttttgaggataacgccttgagggttgagtatgtacatttgcacaaaagtgtttca
caaagtgggttggaaaaagatgttcaagcaagtgtagagcagagtgaggcgggtacttcc
acaagaagcgaaaaaaagagatcatcttcaattagctcaagaaatggagaaagtctcgta
gaagatgatacagattactatgctcatgaacgtaagaaaactaagcgacatagaagtaga
tcccgttccaagtcaagaagtcctgagagcggaagaagacccgcaccaagcgcaaaaagc
atatcatcagccacccaaatgttactgaagggattcaaatcagaggcgatttcaatgtgc
tacatttgtcgtttgcagccacgtcctggagcactcaatttggacaagtgtgtcaaaaat
ggagtccctccaggaccacttttgggccttctgaaaaatggagaggatgttactttgggt
aatgggactgttgttaaatctgttgatgtttgtgaacctgatgatccaggacctatattt
ttagttgtggactgtccgtcggctgactatttagaatctttagcttccaatcctcgaatg
aagaaacaccaaaagtttgctcaattcgacgacgatgcggcttgcttagttgtccatttc
acgcctaaagacgtcatggaacttccactgtataaacgctggatggaggatttcacgcct
agcacgcaacacattcaagttaatgactccaattcctgtatgggaagtacagcggttcat
agaatccagtataagttaaatctgctttcgccagattttttcccgctgttaggtgatcgg
ggcactccatctttatgcgagacgtttggcaatcatcagaataaaaagcagaagtcggag
gacataaatttcgcgaatctaaaccttgatattgcgcctgcaaacaattgtaaaactgtc
aatgaaaacagaagtatcggaagtttaagtagctactatttaagaccgaaaaaaggattt
gatagcacttcgcatatcaatttggacacgcaagagtttatagacgaaaccatgtctctc
ccgcaattttccgacgctcttaaagaactacaccaaaagcttcagattgaaaagagcaat
tacacgattagagattatcctcaagtgttatttttaggaacgggctcctgtattcctaat
aaaacgagaaacactagtggaattcttttgcaaattagcgatacgaaaaacattttatta
gactgcggagaaggaacctgtggtcaaatcactcgatttttcggacaagaaaaagctaac
aaagttttgaccgagattgatgccatttacatttcccatctgcatgctgaccaccatata
gggctaataggagtgctacaaggtagacggaaagcgttggatctgttgcgaattgagaaa
gcacccttaatcttatttgcccccaggcaaattttagcttggttggcgttctatgatcgg
tttttcgagaatatcaaggatgaatatgttttagtgcccaatggagaattgattttaaac
gaaaccacttttgccgatgagaagagaattaagattttaagcaatttggatatgagcgat
attagtacgtgtttagtcaggcactgtccaaatgcttttggagtgtcgattacacatgaa
tccgggtataaaattacatattctggagatacgatgccgtctgagaagctagttgaattg
ggtaaaaattcggatgttttaatacacgaagccacgatggaagacgaattggccaaagaa
gcggttgtgaagatgcattcgacgacttcccaggcgatccaagtgggcaaagacatgaag
gctaagcatgttatattgacgcattttagtcaaagatatgcgaaattgcccagatttaac
gacaatttcgcagataatgtcagcatagcttttgacaatatgcaggtgaagctcgatgaa
ctacctttagttccgctgctttatcctgccttgaaaattatgtttgctgatcactatgaa
caattggaacataaggcggttaaaagacaactaaaggcagaaaggcaggcattcttggag
cagcctaaattacaacagaatcaaagctga
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