Dendroctonus ponderosae (mountain pine beetle): 109544483
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Entry
109544483 CDS
T04899
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
dpa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
109544483
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109544483
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpa02000
]
109544483
Transporters [BR:
dpa02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
109544483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
NPC1_N
Sterol-sensing
Folate_rec
Motif
Other DBs
NCBI-GeneID:
109544483
NCBI-ProteinID:
XP_019770253
EnsemblRapid:
LOC109544483
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MRTLSSKLYFYGLLVFICTNEVYAAQNNTSISRTDVPGSRGHCVWYGECHHQGTLAQNCP
YDGPAKPLNTSGAEILKKYCPTMDPSSVCCDDAQLRTMDSSIALAANFLKRCPSCMSNLV
QSICQLTCSPHQSTFMDIKKNNTDTETNVTYITEVDYYITQQYMDKTYNSCQQVSVPATG
QLAMDFMCGDWGALRCTANRWFTYMGTAGNNSVYVPFQINYINSTTAKVGNFTPMDIEIT
PCNKPLNSDTPACSCVDCEDSCPVPPPDPPKPQPFHIAGFEGMSFLMLVVFVIGSIVFLL
TVFMCSAGRTFDVRLINEPECVPDVLSDVELDNDADVSQVGLVGQGSEEMRAAVGRRLAS
AEFHSSQVALGDASAGENSPLQSSHRSSITSELEHEMDMHSVSKVPGEYDTPSSFIERLG
ANTDSCLQKFFEKWGTFCAERPWLVLFFGTCVIVALGHGIKYLKVTTDPVELWASPSSRS
RVEKEYFDSHFDPFYRNEQVIIRAKNLKSIIHPTSLGNVTFGPAFNDTFLLEVLDLQERI
KAIGGGTDYAYENICFAPLRTDEDEASLDQCAVQSVWGYFQDSIETFEETGTDPDHFQIN
YLDALLKCMSNPYNTDCFALYGGPVDPAIAFGGFLKSGENLPKSPKYEDATAVILTFLVN
NYHNKSKIVAAMEWEKHFVAFMKNYTESNVSQYMDIAFTSERSIEDELDRESQGDVITIL
ISYLIMFAYIAVSLGQVNSCSRLLIDSKITLGLGGVIIVLASVVSSVGLFGFVGTPATLI
IIEVIPFLVLAVGVDNIFILVQTHQRDVKKPGETHAQHIGRTLGQVGPSMLLTSVSESSC
FFLGSLSDMPAVRAFALYAGMALLFDFIFQITCFVSLLSLDTIRQNSNRFDIFCCLRGSK
KNEPDNLTSQEGLLFTFFKSVYVGFIMKKPMRVLIMIVFFGWLCSSIAVVPHIEIGLDQE
LSMPEDSFVLKYFKFLKDYLSIGPPMYFVVKNGLNYSEFKDQNLVCGGQYCNVDSLITQV
YMASKDPENTYIAKPSSSWLDDYIDWTAIESCCKKRVADGGFCPHESYDPQCQACGIALN
NRTHRPKPEEFERYISFFLQDNPDATCAKAGHAAYSHAVNYASNRKTNLSNVGASYFMSY
HSILKTSADYYESMRKARTISANLTKSVGVEVFPYSVFYVFYEQYLTMWPDTLQSLGISL
LAIFLATFFLMGLDIFSSIVVLITITMILVNLGGLMYWWHITLNAVSLVNLVMAVGISVE
FCSHLVHSFSMSVKTTRVDRAADALAKMGSSIFSGITLTKFGGIIVLYFAKSQIFQVFYF
RMYLGIVLFGAAHGLIFLPVLLSFIGLMTQKKKIATVATRMQFASGSVERSGEPSVTSPL
LQPSSSRQGYHSMIQEDD
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaggactttgtcgtcaaagctgtacttctatggattgctggtgtttatttgtacgaat
gaggtttatgccgctcaaaacaatacgtccatcagtcgtacagatgtaccaggatcgcga
ggccattgcgtttggtatggtgagtgccatcatcagggcacacttgcgcaaaattgcccc
tacgatggacctgcgaagcccttgaacacttcgggggctgaaattttgaaaaagtactgt
ccaactatggatcccagcagcgtgtgctgcgatgatgcccaactacgaaccatggatagt
agcattgcattggctgccaatttcttaaaaagatgtccaagttgcatgtcgaatctcgtg
caaagcatctgccaactgacctgttcgcctcaccaatcaacattcatggacatcaaaaag
aacaatactgatactgagactaatgtcacatatataacggaagtggactattacattacc
cagcaatatatggataaaacgtacaactcctgccagcaggtttcagtaccagccaccggg
cagctggccatggattttatgtgtggcgattggggtgcgctcagatgcaccgcaaatcga
tggttcacctacatgggaaccgctggaaacaacagtgtttatgtaccgttccagatcaat
tacatcaactcaactacagcaaaagtgggcaactttacaccgatggatatagaaattact
ccctgtaataaaccgttaaatagtgatacaccagcatgtagttgtgtggactgtgaagat
agttgtccagtgcctcccccagatccgcccaaaccccaacccttccatatagcaggtttc
gagggcatgagttttctcatgttggtggttttcgttatcggatccatcgtttttctgctc
accgtttttatgtgttcggcaggcagaacttttgatgtcagactgataaatgaacccgaa
tgtgtccctgacgttttgtcggatgttgaattggataatgacgccgacgttagtcaagtt
ggtctggttggtcaagggtccgaagagatgcgcgctgcggtcggtcgacgtctcgcctct
gccgagtttcactcgtcccaagtggcactgggagacgcgagcgcaggcgagaacagtccc
ctacagagcagtcacagatctagtatcacttctgagcttgaacatgaaatggacatgcac
tcagttagcaaagtacccggagagtatgacaccccctcgtcatttattgaaagattaggg
gcaaataccgactcttgcctgcagaaattcttcgagaaatggggcactttttgcgcggaa
aggccatggttggttctcttttttggtacctgtgtgattgtcgccttgggtcatggcatc
aaatatttaaaggtcactactgatcccgtagaactgtgggccagtccatcgtctcgcagt
cgtgtagaaaaagaatatttcgactcccactttgacccgttctaccgaaatgaacaggtc
atcatccgagcgaaaaatctgaagtctattattcatccaacttcactaggcaatgtcacg
ttcgggcccgcattcaacgacaccttcctgttggaggtgctggaccttcaagagagaatt
aaggccattggagggggtactgactatgcgtacgaaaatatttgctttgcacctttgaga
actgatgaggatgaagcgtcgctggatcagtgcgcggttcaaagcgtttggggatatttc
caggatagtatcgaaacttttgaagaaaccggaacggatccagatcactttcaaatcaat
tatttagacgctttgttgaaatgcatgtccaatccttacaatacagattgttttgcctta
tatggaggaccggttgatcctgcaattgcatttggaggttttctaaaatcgggggaaaac
ttgccgaaaagccccaaatatgaagatgccacagcagttattttgactttcttggtcaac
aactatcataacaaatcgaaaattgttgccgccatggaatgggaaaagcactttgtagct
ttcatgaaaaattacactgagagcaatgtttcgcagtacatggatatcgcgttcactagt
gagagatcgattgaggatgaattagatcgggagtctcaaggagatgtaattaccatattg
atttcctacttgattatgttcgcgtacatcgccgtttccctcggccaagttaacagctgc
tcccgactgcttattgacagtaaaattacgcttggtttgggaggagtcatcatcgttttg
gcctctgtggtgtcttctgtaggattatttggatttgtcggcactccagctactctgatc
atcattgaagtgattccctttttggtgctcgcagtcggagtggataatatctttatctta
gtgcaaacccatcagcgcgatgttaagaagccgggagaaacccacgctcagcacatcggc
cgtactttaggccaagttggcccaagcatgctgttgacaagtgtttctgaaagctcctgc
ttctttttgggcagtttatcagacatgccagccgtacgagctttcgccctctatgctgga
atggctctacttttcgatttcattttccaaattacctgctttgttagtttgctgtctttg
gacactattcgacagaactccaacagatttgatatattctgctgcttgcgagggtccaaa
aagaacgagccagacaatctgaccagtcaagaaggtttattatttacgttttttaagtca
gtctacgtgggcttcattatgaaaaagccaatgagagtgctcataatgatcgttttcttc
ggctggttatgttcctcgatcgccgtggtgccgcacatagaaatcggtttagaccaagaa
ctgtccatgcctgaagattcttttgtgttgaagtacttcaagttcctgaaagactaccta
agcatcggaccgccaatgtatttcgtagtgaagaatggactaaactactcggagtttaag
gaccagaatttagtgtgcggcggacagtattgcaatgtggactcactgatcacccaagtg
tacatggcgagcaaagatccggaaaacacatatattgccaagccaagcagcagctggttg
gacgattacattgactggacggccattgagagctgttgcaaaaaacgtgtagctgatggc
ggattttgtccacatgaaagttacgacccacaatgtcaagcgtgtggtatcgccctaaac
aacaggacacaccggccaaagcctgaagagtttgagcgatacatctcgttcttccttcag
gacaatccggacgcaacgtgcgcaaaggcaggtcacgccgcttacagtcatgctgttaac
tatgcgtccaataggaaaacgaatctgtctaacgtgggcgccagctactttatgtcgtac
cacagtatactgaaaacgtcagcagactactacgaaagcatgcgcaaagctaggactata
tcagccaatcttaccaaatcggttggcgttgaggtgttcccatactcagtgttttacgtg
ttctacgaacagtatctcaccatgtggcccgatacgttacaaagccttggaatctctctc
cttgccatattcctcgccaccttcttcctgatgggattagatatattctccagtatcgtg
gtactgatcacaatcacgatgattctggtgaatctcggcggcttgatgtactggtggcac
atcactctgaacgcagtgtcgttagtcaatctggtaatggctgtgggaattagcgtggaa
ttctgctcccacttggtacacagtttctccatgtcagtgaaaacgaccagagtggataga
gcggccgacgctttggcgaaaatgggcagctccatcttttccggtattacgctgacaaag
ttcggaggaattattgtgctgtacttcgccaaatcgcagattttccaagtgttctatttc
cgaatgtacctaggaattgtcctgtttggagccgctcatgggctgatatttttgcccgtt
ttactcagttttattggcctgatgacgcaaaagaagaaaatcgcgaccgttgcgacgcgt
atgcagttcgccagcggttctgtggaaagatcaggcgaaccatctgtcacatcacctctc
ttgcaaccgtcttcaagcaggcaaggttaccactctatgattcaagaagatgactga
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integrated database retrieval system
