Dendroctonus ponderosae (mountain pine beetle): 109544659
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Entry
109544659 CDS
T04899
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109544659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109544659
Spliceosome [BR:
dpa03041
]
Complex C
Other components
Step II factors
109544659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
PEP5_VPS11_N
PQQ_2
Motif
Other DBs
NCBI-GeneID:
109544659
NCBI-ProteinID:
XP_048520175
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MLSIQAYSGSSSSSDEDDPSKEGSEATLEPPRPISPESIKFSLKKDLQICAAPTVLPPAV
DTDTLHIHPDAKELMYNPKFEELFAPVVGPTNPFKTQKEVEKNILSGHVEPAHVSEFQFE
NQRRTFASFGYALDPSVSIDQQGLTKVIGSTEEAKDSNIKTVFEKTQLRPLDKRKRQKND
NPDDIEGFLGPWGGFEGEQRVIRPTEEEQAELQELVSKRTRRGREPEERHIEEKSVLHIK
DAVDYQGRSYLHAPHDVGINLKSDAPPDKCFLPKSHIHTWTGHTKGVSAIRWFPKTAHLL
LSCSMDCKIKIWEVYKERRCVRTYYGHRQAVRDINFNNNGNQFLSAGYDRYIKLWDTETG
QVVHRFTSRKIPYCVKFNPDYNKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGAVNTI
TFVDEHRRFVTTSDDKSLRVWEWDIPVDMKYIADPTMHSMPAVTPSPNGKWLACQSMDNK
IVIFSALNRFKLNRKKTFTGHMVAGYACQLDFSPDLSYLVSGDADGKCFIWDWKTTKLYK
KWKAHDNVCISCLWHPHEPSKLVTAGWDGLIKYWD
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccattcaagcctacagtggtagtagcagtagtagtgacgaagatgatccatcg
aaagagggttcggaagcaacgctggagcctccaagaccaatttctccagaatcaatcaaa
ttctccttgaagaaggatcttcagatatgtgcagcccccactgtactaccgcctgcagtg
gacacagatacattgcatattcacccagacgcaaaggagctaatgtacaatcccaagttt
gaggagttgtttgcaccagtggttggacctacaaatccatttaagacccaaaaagaagta
gagaaaaacatactatcaggtcatgtagaacctgcccatgtgagtgagttccaattcgag
aaccagagaaggacttttgcaagttttggctatgctttggatccatctgtgagcattgat
cagcagggcttgacaaaagtcatcggaagtactgaggaagctaaagattcgaacataaaa
acagtatttgaaaaaactcagttgagacctctagataaaaggaaaaggcaaaagaatgac
aatcctgatgatattgagggcttcttggggccatggggcggctttgagggcgaacagcgc
gtcatacgaccaacggaggaggagcaagccgaactgcaagagcttgtctcaaaaaggact
agaagaggaagggagccagaagaaagacacattgaagagaagtctgtcttacatattaag
gatgctgttgactatcaagggcgatcctatttgcatgccccacatgatgttggcatcaat
ctgaagtctgatgcacctccggataaatgtttcctgccaaagtcccatattcatacatgg
actggacataccaagggagtctcggcaatacgttggtttccaaaaactgcccatttactt
ctatcatgtagcatggactgtaaaattaaaatatgggaagtctacaaggagagacgttgc
gtgaggacctactatggacacagacaggctgttcgagatatcaattttaacaacaacgga
aaccagtttttgtccgctggttatgatcgatatattaaattatgggacacggaaacagga
caagtggtccacaggtttaccagcagaaaaattccgtactgtgtgaagtttaatcctgat
tacaataaacagcacttgtttgtagcaggaacttctgataagaaaattatttgctgggac
accaggtctggggatatcgtacaagaatacgataggcatttaggagcagtcaatacaata
acatttgtggatgaacatcgtcgttttgttaccacttcggatgacaaatccttgagggtt
tgggagtgggacataccagtggacatgaagtatattgcagatcccaccatgcacagtatg
ccggcagtaacacccagtccaaatggcaaatggttggcctgccaaagtatggacaacaaa
atcgtaattttctcggcactgaatcgctttaagttgaaccgaaagaaaactttcactgga
catatggtagcggggtatgcctgccaattggacttctcgccagatctttcgtatcttgtt
tctggggatgcagatggaaaatgctttatctgggactggaaaaccacaaaactgtacaag
aagtggaaagcccacgacaatgtgtgcatcagctgcttgtggcatcctcatgagccgagc
aagttggtaacagccggatgggatggacttattaaatattgggattaa
DBGET
integrated database retrieval system
