Dendroctonus ponderosae (mountain pine beetle): 109544752
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Entry
109544752 CDS
T04899
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109544752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109544752
03012 Translation factors [BR:
dpa03012
]
109544752
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109544752
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109544752
Translation factors [BR:
dpa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109544752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
nSTAND3
AAA_19
ATPase
AAA_22
AAA_14
AAA_23
NPHP3_N
PhoH
RsgA_GTPase
ATPase_2
Motif
Other DBs
NCBI-GeneID:
109544752
NCBI-ProteinID:
XP_019770631
UniProt:
A0AAR5QBU8
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MRRRRPFRPGPSGSGGHPKDLKGQQIGKWYAMRNKSRNELENRRLNRTQMELGEASMSGE
QRNDLRRQYQAEKKDKHEQELRNQIEREQKKPLGSILISEQKKTRIAEILDQRVHAFLER
FLEKSRSCKHLPETDFMDEFQQHITGSIMEKLKENPGIRFQGKCDKLDQRLLTELQAKSA
SSSYQKMQKIRQMLPSMHMRQKILDLIENNQITVISGETGCGKTTQVSQFILDDFIAKSK
GSECKIICTQPRRISAIAVAERVACERDEKLGNSVGFQIRLEKTLPRERGSILFCTTGVV
LRYMESEPALRQVSHLILDEIHERDITSDFLITVLKDVVQYNSDIKIVLMSATLNADAFS
RYYNGAPAINIPGFTHDVQEFFLEDVLQITGYQAKKTTPIWVVKRDAYKNREFTEFVQPF
IRQLEAKNKYSRDVLNQLIKMESEQLDVNLVFELLRTICRKGHSDGAILVFLPGFGEINK
LCNLLTDSHQFPPRRYLIIPLHSQLPTVDQKRIFDPPPQGITKIIIATNIAETSITIDDV
TTVIDSGYIKVSNLDPATGIETLKPELVSQANAAQRRGRAGRVRPGVCYHMITSLRYQLL
DKFLKPEVLRKRLEDVILLLKMMQLGDAESFLAKLMDPPEAETVKSSLQVLTRLGALNSE
EALTPLGYHMAKLPMPAQCSKMLILATIFSCIDPILSVAASLGFKDAYQLSIMEEEFDAD
RKRQKLAQGTHSDHLCLHYAIRGFEEAREQNQFCREYHLSGPILRQLVQLRKQFAQDLFD
MKLISDPDPQSATHNINSENVCIVKAIIAAGLYPNVAVIGKTYPREVHLHSRSGTHEKMI
LHKKSVLAQNNLFPSPLIVYYLRLKTSKIFVYDASVICPLSLVFFGDQFKIHTRNDNADS
FTGVSVNNNIRFRCSPSTALVLNNLVEQLNQILEWYVSHPGFMKWNLDSYDTKVLRLIID
MITTEERQDFDFSDFEDRW
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggagacgaccgttccgaccaggcccgtcaggaagcgggggtcatcctaaagac
ctcaagggccagcagattgggaagtggtatgcgatgagaaacaaatctcgaaacgagctg
gagaatcggcgtctaaataggacccagatggaactgggagaggcttcaatgagtggcgag
caaaggaatgatttaaggcggcagtaccaggcggagaaaaaggacaaacatgagcaggaa
ttacggaaccaaatagagcgtgagcaaaaaaaaccgttgggcagcatattgatctctgaa
cagaagaaaactcgtatagctgagattctcgatcaaagggtccacgcctttctggaaagg
tttttggagaaaagcagaagctgtaaacacctaccggaaaccgactttatggatgagttt
caacaacacatcaccggtagcattatggaaaaattgaaggaaaacccaggcattagattt
caaggaaaatgcgacaaattggaccagcgattgctgacagaattgcaagctaaatcagcc
tctagctcgtatcagaaaatgcaaaagatccgccaaatgttgccttccatgcacatgagg
caaaaaatattggacttgattgaaaacaaccagataacagttatcagcggcgaaactggg
tgtggaaaaacaacccaagtttcacaattcattctggatgatttcatcgcaaagagcaaa
ggctctgagtgtaaaattatctgcactcagcctcgacggattagtgccattgctgtagca
gaaagagtagcctgcgaacgggatgaaaaacttggaaatagcgttggctttcagatcaga
ctggaaaagactttaccgcgagagaggggctcaatattgttctgcacgactggagttgta
ttgcgatatatggaaagtgagccggcgttgcgccaagtctcgcatctgatccttgacgaa
atccacgagcgagatattacgtccgattttcttatcaccgtcctaaaggacgtcgttcag
tacaattctgatataaagattgtgctgatgagcgccactttaaacgcggacgctttttcg
cggtattacaacggcgcgcctgctattaacattccaggcttcacccacgatgtccaggag
ttctttttggaagacgttctgcagattacaggctatcaagcaaaaaaaaccactccaatc
tgggtggtaaagcgggatgcctacaagaatagggaatttacggaatttgttcagccattc
attcgacaattggaggctaaaaataagtacagcagggacgtgctgaaccagctgatcaag
atggaaagtgagcagttagacgttaatttagtgttcgagctgttgaggactatttgccgg
aagggccatagcgatggggccattttggtgttcctgcctgggtttggcgagatcaacaaa
ctctgcaacctgctcacagattcgcaccagtttccccctcgtaggtacctgatcattcct
ttgcattcccaactgccaacagtcgatcagaagcggatctttgatccgcctcctcaaggc
atcaccaaaatcatcatagccacaaatatagcggagacttcgataaccattgatgatgtt
acaaccgtaatcgattccggttacattaaagtgagcaacctggatccggccacgggaatt
gaaactctgaagcctgaattggtttctcaagcgaatgctgctcagagaaggggtcgagct
ggacgtgtgcgaccgggcgtttgttatcacatgataacgagtttgcgataccagcttctg
gacaaatttctcaagccggaagtattaagaaaacggcttgaagacgtaattttgttattg
aagatgatgcagctgggcgatgcggagtcttttctggcaaaattgatggatccgcctgaa
gctgaaaccgttaaatcctctctgcaagtgctaacgcgactcggagcgctcaattcggag
gaagcactcactcctcttggctaccacatggctaagctgcccatgccggcgcagtgctca
aagatgttaatattggccaccatatttagctgtattgatccgattctgtcggtggcggcc
tcattaggctttaaggacgcctaccaattgagcattatggaagaggagtttgatgcggac
aggaaaaggcagaaattggctcaaggaacccacagcgatcacctttgcctacactacgcc
atacgaggctttgaagaggctcgggagcagaaccagttctgtcgcgagtaccatttgagc
ggtcccattcttcgtcagcttgtacagcttcgcaagcaattcgctcaagacctattcgat
atgaaacttatcagtgatccggacccacaaagtgctacccacaacataaacagcgagaat
gtttgcattgttaaggcaatcattgctgcaggattgtaccccaatgttgcggttatcggg
aaaacttatcctagggaagtgcatttgcactccagatcgggaacacatgagaaaatgatt
ctgcataagaagtcagttctggctcaaaacaatttgttcccgtcgccgcttattgtttat
tatttgagactaaagacgtctaagatatttgtttatgatgcttccgtgatctgccctttg
tcgctcgttttctttggagatcagttcaagatccacaccagaaacgacaatgcggattct
ttcaccggcgtgtctgtgaacaacaacattcgttttagatgttcgccgtccacagcgctg
gttttgaacaatctggtggaacaattaaaccaaatcctggaatggtatgtgtcgcatccg
ggattcatgaagtggaatctggacagttacgataccaaagtgttgaggctaattatcgat
atgattacaactgaagaacgacaggatttcgatttcagcgattttgaagaccgctggtga
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integrated database retrieval system
