Dendroctonus ponderosae (mountain pine beetle): 109544785
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Entry
109544785 CDS
T04899
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03013
Nucleocytoplasmic transport
dpa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109544785
03015 mRNA surveillance pathway
109544785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpa03019
]
109544785
Messenger RNA biogenesis [BR:
dpa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109544785
mRNA cycle factors
P-body specific factors
109544785
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
LIC4_C
Motif
Other DBs
NCBI-GeneID:
109544785
NCBI-ProteinID:
XP_019770677
UniProt:
N6TXE7
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MTMDNVKSKESAVEAAAAATPEAEMNEVKAYMKEMEERFKIKHELRTANQGAAQTRPGDS
HFSKLDSSLKKNTAYVKKIKNFSAAQVDAYLKDMASLNLSKYISEVAAAIVDSKLKMTDV
QAAVKLCSVLHQTYVEFSLHLFENWQKVLGFKSHDKILNPSKLRVDLRFYAELLQSGLFA
NKNAFSLLGSVLTVLINMDKEEHVNVPIVLSFCKHCGDDYAGLLPRRIRQLATKYEIPVP
KSSFLPAEKQQNVRTLLKDYYLSLCKHLLKDHQELQNYEKHNMKILQTKGELSQERKERH
ETMQNFYEKLLTNAQNFAEILDEDMPILKTQNLPKTEDNMIVTGLGPDFEDNSANLENIW
CDVETQKFYCELPELTVFLPTSFLKNRPPPPPTETVTEEVLDSELPTEDTEEDSKSEEAP
LHEDDPEDQTTTNASNKIVLDAFLTNLPNCVNREMIDNAAIDFLVTLNIKHNRRKLVRAL
FGVHRTRLDLLPFYARFVAILYPAVPEVGNELCQMLRQDFKYHVKKKDQVNIESKIKVVR
FIGELVKFNLYSKIEVLFCLKFLLHDFSHHNIEMACNLLEVCGRFLYCSPDSHPRTRVYL
EQMMRKKTVMTLDSRYVTQIENAYYYVNPPEMVAVSQKERPVMHQFIRKLLYQDLHKNNT
DKTMRLMRKLDWAKEEISNYTIKCLTGAHNVKYFNIRCLASLLSGLVGYQEEIGTKVVDG
VLEDIRLGMEVNLAKYNQRRVAQIKYLGELYNYRMVESSDVFKVLYSLITFGVSMDPNEP
SELDSPKQLFRIKLACVLLETCGTYFSSGSSKRKLDYYLVFLQMYYWNKKELWKLYNETF
PPTLEHIFKETLGMLRPKLKLCQSYEEAQVEVNNIRITLGIEKLLSEQVTKEEGDGLGMI
AEADNEEADDEPSEGATAPITDDTGTEDETVDHTQDSDDEGDLETSEAEGDQVSESLAIP
KGPRKVTCPEDDDFLTALDKMVSENIQERMREPVKSGNLDISVPVVMKNNKKNYDQLQEP
SEETNPRIGFVLMMRKGNKQQYKQFEADPDSELVQNLKDQELAQKEEKERVKRLTLNITE
RFEEEDYQESISQQSRPVTQNLNRERKKYQHPKGAPDADLIFGPKKVR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggacaatgttaaatcgaaagaatccgcagtggaagcagctgcagctgccaca
cccgaagctgaaatgaacgaagtcaaagcgtacatgaaagaaatggaggaacgctttaag
atcaaacacgagttgcgaacagctaaccagggtgctgctcaaacaaggcctggcgattcc
cactttagcaagttggatagcagcttgaagaagaacactgcctatgtgaaaaaaatcaag
aatttttccgccgctcaagtcgatgcctacctgaaggatatggccagtttgaatttatca
aagtacatttctgaagtggctgcagctattgtggactcgaagctgaagatgactgatgtg
caggcagccgttaagctctgcagcgtattgcatcagacctatgtggagttttcgctgcat
ttgtttgaaaattggcaaaaagtgctgggcttcaaatcacatgacaaaatcctcaacccc
agcaaactgagggtggatctccggttctacgcagaactgttgcaatcggggctgtttgcg
aacaaaaacgcattctctctcctgggctctgtattaacagtcttgataaacatggacaag
gaagagcacgtaaacgtacccattgtgttgagtttttgcaagcattgtggcgatgactac
gcagggctgttgcctaggcgcatccgtcaacttgccaccaaatatgaaattcccgttcca
aaaagcagctttttgcccgcagagaagcagcaaaacgtgagaaccctgctgaaggactac
tatctgtccctctgcaagcatctgctcaaagaccatcaagagctgcaaaactatgaaaag
cacaacatgaaaatattgcagactaaaggcgaactgagccaggagcggaaagagcggcac
gaaacaatgcagaacttttacgaaaagcttctcacaaatgcacaaaattttgctgaaatt
ttggacgaagacatgccgattcttaaaacacagaacttgccaaaaaccgaagataacatg
atcgttactggtttggggccagacttcgaggataacagcgcaaaccttgaaaatatctgg
tgcgatgtggaaacccagaaattctactgcgaactgccggaactcacagtgtttttgccc
acatcttttttgaaaaaccgaccaccgcctcctccaacagaaacagttaccgaggaagtt
ttagactcggagttgcccactgaagacaccgaagaagacagtaagtcagaagaagctcct
ttgcacgaggacgacccagaggatcagacaacaaccaacgccagtaataaaatcgtattg
gatgcgtttttaaccaatctaccaaactgcgtgaatcgagagatgatcgataatgcggcc
atagattttctcgtgactttgaacattaaacacaatcggcgcaagcttgtcagggcactg
tttggggttcacagaacaagattagatcttcttccattctatgcacgattcgtggccatt
ctatatccagctgtgccggaagtgggcaacgaactatgccaaatgttgcgccaagatttc
aaataccatgtaaagaaaaaggaccaggtgaacattgagtcgaaaatcaaagtggtgcgg
ttcattggcgaactggtcaaattcaatctctattcgaaaatcgaggtgctgttttgtctg
aagtttttgcttcatgatttctcccatcacaacatcgagatggcctgcaatttgttggag
gtttgcggccggtttctgtactgtagtcccgactcgcatccaaggactcgagtctatttg
gagcaaatgatgcgaaaaaaaacagttatgactttggattctcgatatgtgactcaaata
gaaaacgcgtactattacgtgaatccaccggagatggtcgcggtttcccaaaaggagcga
ccagtgatgcatcaatttatcagaaaactcctctaccaagacttgcataagaacaacaca
gacaaaacaatgagattgatgcggaaactggactgggctaaggaagagatatcaaattac
acaataaaatgcctgactggagcccataatgtgaaatacttcaatataaggtgcttagct
agtcttctatcgggtttggtgggttaccaggaagaaattggcacgaaagtggtcgacggt
gtcttggaagacatcagattggggatggaggtaaacctagccaaatacaaccagagaaga
gtggctcaaataaagtatctaggtgaattgtacaattaccgaatggtcgagagctccgac
gtgtttaaggtgttgtactcgttaatcactttcggcgtatcaatggacccaaacgagcca
tcagagctcgattcaccaaaacaactgttccgtattaaattagcttgcgttctattagag
acgtgtggaacgtatttcagcagcggcagtagcaagaggaaactggattattacctggtg
ttcttgcaaatgtactactggaataaaaaagagctctggaaactgtacaatgaaacgttt
ccgcctactttggagcacatttttaaggaaaccttagggatgttgaggcccaagctgaag
ctgtgccaaagctatgaagaagctcaagtggaagtgaataacatcagaatcactttgggg
atagaaaagcttttaagcgaacaggtgacgaaggaagaaggcgacggtctaggaatgatt
gctgaagcggataatgaagaagccgatgacgagccttcggagggcgcaacagccccaatt
actgatgatacgggtactgaagacgaaaccgtggaccacacgcaggattctgatgatgaa
ggggatttggagacgagcgaagctgaaggcgatcaagtttcggaatccttagccatccca
aaaggtcccagaaaagtgacctgtccagaagacgacgattttcttacagctctggataaa
atggtgtccgaaaatattcaagaaaggatgcgtgaaccggttaaatcaggaaatttggac
atttcagtgccagttgttatgaaaaacaacaaaaagaactacgatcaattgcaggagcct
tccgaggaaaccaacccaagaataggatttgttctgatgatgcgcaaaggcaacaaacaa
cagtataaacaatttgaggcagaccccgactcggaactggttcagaacttgaaagatcaa
gagctcgctcagaaggaagaaaaagagcgcgtgaaacgactgacgctgaatattacggag
cgatttgaagaagaagactatcaagaatccatttcgcagcaaagcaggccggttacccag
aatttgaaccgcgagcgaaaaaaataccaacacccgaaaggggctcctgacgctgatctc
attttcggtccaaagaaagtgcgttaa
DBGET
integrated database retrieval system
