Dendroctonus ponderosae (mountain pine beetle): 109544966
Help
Entry
109544966 CDS
T04899
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109544966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109544966
Spliceosome [BR:
dpa03041
]
Complex B
Other components
Prp19-related factors
109544966
Complex C
109544966
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
AAA_16
AAA
RecA_N
AAA_22
PhoH
UvrD_C_2
nSTAND3
Parvo_NS1
DnaB_C
Motif
Other DBs
NCBI-GeneID:
109544966
NCBI-ProteinID:
XP_019770956
UniProt:
A0AAR5QCQ3
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MSVNLEKNITAPTVQQIQTDRLTQLAEKYWAPHSEQKHEQFNPDVIEDIYMQDIRGSNFS
IRRIMVLEFSQYLENFLWPNYKPGASVAHILSIVIMVNEKFRERVQVWQAFRKDSEFFPD
FFQRVLESCLEDELLINIREQTALLIFLNHCFNSMEEAICRDQVKRLVSLSMWISLQPSR
REHEFKLNPRWKKFWRAIQRKDKPDQLEKLTWERTFLQKLMLKFLLVLDSIGEAGICPPD
KVHYCERFLELVIDLEALLPTRRFFNTVLDDCHVVVRCWLSGLIKRPEGHLFSQLLEMLK
FYTRFEISDETGDPLSDHDMTQLHYIKITSLQKAAFAKFPELRAFSLANVANVDTRKALE
KHFGPLSCDQLKAIATYLCLVPPAGQEENYKWCRLDESFLRELLVSRHEKRVSQLVALNE
MPLYPTEAIIWDENIVPTAYFSGEGCLALPKLNMQFLTLHDYLLRNFNLFRLESTYEIRQ
DIEDAVSRLCPWKAEDGSTYWGGWARMAHPIEHFAVVEVAKPNIGETRPSRVRADVTVNL
SVKSEVKVEWENLRKHDVCFLVTVKPLNPIGTRYNYKEPFVPQVGLRCVRGCEIEGMLDS
NGRVIEDGPDPKPVLPGDRRTFRVWLDCNQYREDMSEANKGKDDVYEGFNIIIRRKPKEN
NFKAVLETIRELMNTECVVPEWLHNIILGYGDPSAAHYEKMEGQISTLDYNDTFIDADHL
RSCFPEYQIKIKTDDPKKLVRPFRLTFENLGSQPAEEKAKIIVVEPHKIDRRGPFLFNEP
KKNIIPFTPSQVEAIKSGMQPGLTLVVGPPGTGKTDVAVQIISNLYHNFPNQRTLIVTHS
NQALNQLFDKIVGLDIDERHLLRLGHGEEALETEKDFSRYGRVNYVLAKRIDLLNEVQKL
QESLDVEGDQAYTCETAGYFYLYQILSRWEHFQSIVKPKSGNGVPVEAISKEFPFHRFFN
NAPQPLFQGVSYEADLEVAESCFRYIDHIFKELEEFRAFELLRSGLDRSKYLLVKEAKII
AMTCTHAALKRKELVEIGFKYDNILMEESAQILEIETFIPLLLQNPQDGYNRLKRWIMIG
DHHQLPPVIKNMAFQKYSNMEQSLFTRLVRLGVPTVDLDGQGRARPSICNLYKWRYKQLG
NLGHVENWPEYKRANAGFAFDFQLIDVQDFNGVGESEPNPYFYQNLAEAEYCVAVFMFMR
LIGYPASKITILTTYNGQKHLIRDVINARCAKNPLIGRPHKVTTVDKYQGQQNDYILLSL
VKTNAVGHLRDVRRLVVAMSRARLGLYIFARVALFQNCFELTPAFEQLTTRPTKLHLVLN
ELYPTHRLSNEKPDNQIMVVEDMTHIANFVYQYYMERVKVMRTQYEDTQKQFQEPGSLEQ
KSHDGLIASHPGEERDTDSEDEQEATGQLPIPIQDEVQPPKESPMEIIPVEQPDDDMKDE
TTASETMDTGEVANDE
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaatcttgagaagaatattactgcaccaacagttcaacagattcagactgat
cgtttaactcagttggctgaaaaatattgggcaccccattctgaacagaagcacgagcaa
tttaatcctgatgttattgaagatatttacatgcaggatattcgaggcagcaacttttcc
atcaggcgaatcatggttctggaatttagccagtaccttgaaaattttctatggccaaat
tacaagccgggagcatcagtcgctcacattttatccatcgtcataatggttaatgagaag
ttcagagaaagagtgcaagtttggcaggcattcaggaaagacagcgaattcttcccggat
tttttccaaagagttctcgaatcgtgcctggaagatgagctcctcatcaatatcagggaa
caaacagccttattgatttttctaaatcactgttttaatagtatggaagaagcaatttgt
cgtgatcaagtgaagcgacttgtctccctgtccatgtggatctcactgcaaccaagtcgt
cgcgaacatgaattcaagctgaatcccagatggaaaaagttctggcgagcaattcagcga
aaagacaaaccagatcagttggagaaactgacgtgggaaagaacgtttctgcagaaactc
atgctgaaatttctattggttctggatagtatcggggaagcaggaatttgccctccagat
aaggttcactattgtgagcgctttctcgaactggttatcgacctggaagccttactgccc
accaggcggttcttcaacactgtcttagatgattgccatgttgtcgtcaggtgttggtta
tctggacttattaagcgaccagaggggcatctgttcagccagctacttgagatgctgaaa
ttctacacacgatttgaaatcagtgacgaaacaggcgatcccctgagcgatcatgatatg
acccagctgcattatattaaaattacttcgcttcagaaagctgcctttgcaaaatttcca
gagctgcgcgctttttctttggccaatgtcgctaacgttgatacaaggaaagcgctggaa
aaacattttggacctttaagttgcgaccaattaaaagctatagcaacttacctttgcttg
gtaccgcctgcaggtcaagaagaaaactacaaatggtgcagattagacgaatccttctta
agggaactgcttgtgtctcgacatgaaaaacgagtctcccaactagtggctttaaatgaa
atgcccctttatcctacagaggcgatcatttgggatgaaaacatcgtcccaaccgcctat
ttctcaggagaaggttgcttggccttacccaagctaaatatgcagttcctcacactgcat
gactatcttttgagaaattttaatttgtttagactggagtcgacatacgaaatcaggcaa
gatatcgaagatgctgtgagcaggctgtgtccttggaaagccgaagatggaagcacatat
tggggaggctgggcccgcatggctcatcccattgaacatttcgctgtagttgaagtagct
aaacctaacataggtgaaactagacctagcagagtgcgggcagatgtcacagttaatttg
tctgtaaaatcggaggtaaaagtcgaatgggaaaatctgcggaagcacgacgtgtgtttc
cttgtcactgtaaagccactgaatcccattggtactagatataattataaggagccgttt
gtgccacaagtcggacttcgttgtgttcgcggatgcgaaatcgaaggcatgttggacagc
aatggacgagtaatagaagatggtcccgacccaaaacctgtcctaccaggtgatcgacga
acatttagagtctggctcgattgcaatcagtacagagaagacatgagcgaagcgaataaa
ggcaaagacgatgtatatgaaggctttaacatcattatcagaagaaagcccaaagaaaac
aattttaaagccgtattggaaactatcagggaattaatgaatactgagtgcgtggtcccc
gaatggctccacaacataatcttgggctatggagatccgagtgcagcgcattacgaaaaa
atggaaggtcaaatttcaacgttggattataatgatacattcatcgatgcagaccatctg
cggtcctgctttccggagtatcaaattaaaatcaagactgatgatccgaagaaactagtt
cgaccgttccgtttaacgttcgagaatttgggctcgcagcccgcggaagagaaagccaaa
ataatcgtcgtcgaaccccataaaattgacaggaggggaccgtttctttttaatgaaccg
aaaaagaatattatcccatttacaccctcgcaagtggaagccatcaagtcgggcatgcag
ccaggattaactttggtggtcggtcctcccggtaccggaaaaaccgacgtggctgttcag
atcatttccaatttataccacaactttcccaatcaacgcactctgatcgttacccactcc
aatcaggcccttaatcaactgttcgacaaaatcgtaggcttggatatagacgaaaggcat
ctgcttcgtttggggcatggagaagaagctttggagacggaaaaagactttagcagatac
ggtagggtgaactacgtgttagcaaaacgtatcgatcttctgaatgaagtgcagaaactc
caagagtctctggatgttgaaggagatcaagcatacacttgcgaaactgcgggttatttt
tatttataccaaatcttgtcccgatgggaacatttccaaagcatcgtcaagcctaagagt
ggaaatggcgttccagtagaagcaatatccaaagaatttccattccacaggtttttcaac
aacgcaccccaaccacttttccaaggcgtttcttacgaggctgacttggaagtggcggaa
agttgtttccgttatatcgaccacattttcaaggaattggaagaatttagggcgttcgaa
ttgcttagatccggtctggaccggtcgaaatacctcctggtaaaagaagcaaaaatcatt
gccatgacttgcacacacgcagcattgaaacggaaagaacttgtggaaattggcttcaaa
tatgacaacatcctaatggaagaatcagctcagattctggaaatcgaaacatttatacct
ctgctactgcagaatccccaagacgggtataatcgcctaaaacggtggattatgatcgga
gaccatcaccaactgccgccagtaataaaaaacatggcatttcagaaatattcaaacatg
gaacagagtttgtttacgagattggtgagattgggagtaccaactgtggatttggatggg
caagggcgtgcgagacccagcatttgcaacctgtacaagtggcgttacaagcaattggga
aatttgggtcacgtggagaactggccggaatataagcgggcaaatgcaggatttgctttc
gattttcaactgatcgatgtccaagattttaatggtgtgggagaatctgaacccaatcca
tacttttaccagaatttggccgaggccgagtattgcgtagctgtcttcatgttcatgaga
ctaattggatatccagccagcaaaatcacgatactgaccacttataacggccaaaaacat
ttgattcgagatgtaatcaatgcaagatgtgcgaaaaatcctttaattggcaggccacat
aaggttacgaccgtggataaataccagggccagcaaaatgactacattcttctttcactg
gtgaagaccaatgctgtagggcatttaagagatgttaggcgactcgtggtggcgatgtct
cgagctcgactaggactttacatatttgctcgagttgccttgttccagaattgcttcgaa
ctcaccccagcatttgaacagttaacaaccagacccacgaagttacacctggttttaaat
gagctatacccaacgcatcgccttagcaatgaaaaaccggacaatcaaattatggttgta
gaagatatgacccatatagccaattttgtttatcagtattatatggagcgagttaaagtc
atgcgaacccaatacgaggacactcaaaagcaatttcaagaaccaggcagtttagaacaa
aagtcccatgatggcctaatcgcatcacatcccggtgaagaaagggatactgacagtgag
gatgaacaggaagcaacaggtcaactacctataccgattcaggatgaagtgcagcctcca
aaagaatcaccaatggaaattatacctgtggaacagccggatgatgatatgaaagatgag
actacggcaagtgaaactatggatactggggaagttgctaatgacgagtga
DBGET
integrated database retrieval system
