Dendroctonus ponderosae (mountain pine beetle): 109544991
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Entry
109544991 CDS
T04899
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04512
ECM-receptor interaction
dpa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109544991
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109544991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dpa00535
]
109544991
Proteoglycans [BR:
dpa00535
]
Extracellular matrix (ECM) proteoglycans
Others
109544991
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
109544991
NCBI-ProteinID:
XP_019771008
UniProt:
A0AAR5QCQ4
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MQKFSKSWIHIIQLLSFCILGVKCQLNLLEAEAEGPCANFRIGDDDLQAYDFIRQFKLDL
LGSQSSGVSKVVGSSSLQTAYRFQRYADVTVPTRNIFPFGLPEQFSFISTYRASRITRTA
WHMIRLTNLQHRPQFFVALNPRQQSIDFAISNYEGQLQTLRFNNAKVFDTNWHKIHFGVF
RDRVRLFVDCKDMQEKPMQLRGPMDINGNISIAKFANSRESVPIDLQWMLMSCDPTRPQR
ELCQEIPKIDEFKEVPPVYIPAPPAAPISPRPSCEVVCPRGLPGYNGTDGLPGDRGNQGF
PGLPGPPGPRGERGEFGRPGYAGTPGLQGLPGIRGLAGNPGPEGRPGINGTPGSKGNKGE
SGLAGPKGDRGLDGFSGRPGDRGPEGPPGPPGLAAPAREETLIEGPPGPVGPRGMPGLPG
EEGQVGPRGFPGAPGKDGNEGQVGPIGFKGNKGEQGSPGVAGMPGLTGPPGPPGLTTGSE
IGQVIAGPPGPRGEHGFPGAPGPKGNQGDRGEPGAKGEIGSIGYPGVPGLDGVRGPPGKE
GLPGLEGPKGLPGFIGPPGAPGPIGNPGASGPAGSPGPQGAHGMKGDAGEPGRPGLPGLS
ASEGDRGLPGAPGLTGPQGQSGEKGERGFSGLPGPPGLSGIQGPPGPEGIRGPPGKQGSV
GPKGESGARGYSGAPGNPGMDGKPGTSGIQGYKGERGQEGQQGPIGPRGYTGNQGNSGLP
GPQGLPGLPGPEGKPGPAGPAGPPGLAGQVSTLVEGGYYAGVHGPRGVPGVPGIPGERGA
AGDRGPEGPSGQPGMPGKDGSPGFPGSPGQRGQPGLPGIEGQPGRSYAESEIRDICAAVL
RDQLAELSAALIGPPGHPGISKPGRPGPPGIPGPQGIPGQSGLPGDRGFMGLPGAAGPPG
SIGMPGEKGEKGDRGEEGVGIEGPSGPRGPEGPPGSPGEGIAGRAGERGEPGRAGAPGAQ
GLPGPQGPPGYCEFCNNYAQNYQQMYAAYVAARNGGNNKGP
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattttcgaaaagctggatccacataatacagttgctttccttttgtattcta
ggagtaaaatgtcaactgaatctcttagaggcagaagctgagggtccatgtgcaaatttc
agaataggcgatgatgatctgcaagcttacgactttattaggcaatttaaactggatttg
ttaggatcccaatcttcaggagtgagcaaagtggttggttctagttcactacaaactgct
tatcggttccaacgatatgcagatgttaccgtacccacaaggaacatttttccttttgga
ttaccagaacaattctcatttatttcgacataccgagccagtagaatcacacgcacagct
tggcacatgataagacttacgaatttacagcacagaccccagttctttgtggctctaaac
ccgagacagcaaagcattgattttgcaatctcaaactatgaaggccaattgcaaactttg
agatttaacaacgctaaggttttcgacacaaactggcacaagatacattttggagttttc
agagatcgagttcgattatttgtcgattgtaaggatatgcaggaaaaaccgatgcaactt
cgtggaccgatggatattaatggaaacatatccattgcaaaatttgctaattcgagggaa
tcagttccgatcgatttgcaatggatgttgatgagttgcgatcccacaagacctcaacgt
gaactctgccaggaaatacccaagattgatgagtttaaagaagttcccccagtatacatt
cctgcaccaccagcggctccaatatcgcccagaccctcctgcgaagttgtttgcccaaga
ggactacctggttacaacgggactgatggacttccgggagatagaggaaaccagggattt
ccagggttaccgggaccgccaggacctcgaggtgaaagaggagaattcggacgacctgga
tatgcaggaacccctggccttcaaggtcttccaggcataaggggactcgccggcaatccc
ggtccggaagggcgtccaggaatcaatggaacaccgggatcaaaaggcaacaagggggaa
tccggattagccggtccaaaaggagatcgaggcttagatggcttttccggaagacccgga
gatcgtgggcctgaaggcccgccaggtcctcccggcttagctgcccctgcacgagaagaa
actttaattgaaggcccacctggacctgtaggtcccagaggaatgcccggattaccaggc
gaagagggacaggtaggaccgagaggatttcccggtgcacctggaaaagacggcaatgag
gggcaagtgggcccaataggtttcaaaggaaacaaaggagagcaaggaagtcctggagtg
gcaggcatgccaggcctaacggggcctccgggtcccccaggattgaccacaggtagcgaa
atcgggcaggtaatcgccggcccgcccggtccaagaggcgagcatgggtttccaggtgcg
cctggaccaaaaggaaaccaaggggatagaggcgagcctggtgcaaagggcgaaattgga
tcaatcggatatcctggtgtacctggcctggacggcgttcgaggtccaccaggaaaagaa
ggcttacccggcctggaaggcccgaaaggtctaccaggtttcatcggacctcctggagca
cctgggccgattggcaaccctggagcttcaggtccagcaggttcgcctggccctcagggg
gctcatgggatgaaaggagacgctggtgaaccaggcaggccaggactaccaggcctatct
gcaagtgagggcgatagaggattaccaggagcacctggactaactggcccacaaggacaa
tcaggtgaaaaaggagaacgcggattttcaggtttacccggaccaccaggtttgagtgga
atacaaggcccacccggaccagagggaattagaggtccccctggaaagcagggttctgtg
ggaccgaaaggagaatctggtgctaggggatactctggtgctccgggtaatccgggaatg
gatggaaaacctggcacttccggaattcaggggtataaaggtgaacgtggacaggaaggt
caacaaggacccattggaccaagaggatatactgggaatcaaggcaactcaggtcttcca
gggccacaaggactgccaggtttgcctggtcctgaagggaagcctggacctgccggtcct
gcgggacctccgggtcttgccggacaagtttccactttagttgaaggaggttattatgca
ggagttcatggccctagaggagtgccaggggtaccgggaattccgggagaaagaggcgca
gcaggagatcgaggaccagaaggacctagcggtcaaccgggaatgccagggaaagacgga
tctccaggttttccaggctcacctggacagagagggcaaccagggcttccaggaatcgaa
gggcaacctggcaggagttacgccgaatcggaaattcgtgatatttgcgctgccgttcta
agagatcaactagccgaattatcagctgcacttattggtcctcctggtcatccaggcata
tccaaacctggcaggcctggaccaccgggcattcctgggccacaaggaatccccggtcaa
tcaggattacctggcgatagaggatttatgggtctgcctggagcggctggacctcccgga
tcgataggcatgcctggtgagaagggtgaaaagggagatagaggagaagaaggcgtcgga
attgagggtccatcaggaccgagaggtcctgaaggtcctcccggaagtccaggagaagga
atcgcgggaagagctggtgaaagaggtgaaccaggccgagcaggagctccaggtgcgcaa
ggattgcccggtcctcaaggacctccaggatattgcgagttttgcaataactacgctcaa
aactatcagcaaatgtatgctgcatatgtggccgcaaggaatggcggcaataacaaaggc
ccttga
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