Dendroctonus ponderosae (mountain pine beetle): 109545003
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Entry
109545003 CDS
T04899
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpa04121
]
109545003
Enzymes [BR:
dpa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109545003
Ubiquitin system [BR:
dpa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109545003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
Rtf2
zf-RING_Vps41
UPF0242
HALZ
zf-RING_10
Zn_ribbon_8
zf-C3HC4_4
DUF3450
zf_RING_Vps8
TPR-S
zf-Nse
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
109545003
NCBI-ProteinID:
XP_019771031
UniProt:
A0AAR5QCX1
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MHITCVICSDLFAPSADIYSTQCGHIFHFTCLLQWMENSKTCPQCRNKVSSKNLIRLFVN
VATSQGLEADVTLLQHKLDGVEFTMKLKDQEIKALAVKNQETMKQNKSLRHHTKELEHGE
KRFESIIAAQKEQIKYFKDQVQNYDRLREENVRLKNEMKSLDQIQIALGGTRQQAEDIIR
NENSIESLGLLASILKKSLLDSDSRKNLLQTELRKSKNELTRIKRQEADLRCEYESIKQQ
FESLKRNSEKEVAFLKDKFSQLASKATQGTVNESFNNSIRRLIKESPVNFHRTPVCNRSS
QDFIDLDDCVTPPCSGASQSVIEINDSSHGDIADDSPLPASSMGMFGIQRAKMLGTDTSS
KFSIFKSKQPSFSESTSSNKLKSNSVTYDGLGGSSKEDIFPTPMGVKRSRPLKITLSKLK
KLSADAGRSRKPASVFTNFLDLS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcatataacctgcgtaatttgcagtgatctctttgctcccagtgcagatatttattct
acacaatgtgggcacattttccactttacctgtttactgcaatggatggaaaactctaaa
acatgtccacaatgtaggaacaaagtgtcgtcgaaaaaccttattcgtttatttgttaat
gttgctacatcccagggcttggaggctgatgtcacattgttacagcataaattggacggt
gtagaatttactatgaaactcaaagatcaagaaatcaaggctcttgccgttaaaaatcag
gaaacgatgaagcaaaataaatcgttgagacatcataccaaagagttagaacacggagaa
aaacgcttcgagtctataatagccgcccagaaagaacagattaaatatttcaaagatcaa
gttcaaaattatgatcgattacgagaagaaaatgtgcgactgaaaaacgaaatgaaatcc
ttagatcagatacaaatcgcgcttggtggaacaaggcaacaagctgaagacattattcgg
aatgaaaacagcattgaatcgttgggccttttagcttcgattttaaaaaaatctttgctt
gattctgatagcagaaaaaacttactacaaactgaactgagaaagtctaaaaatgaacta
acccgaatcaaacggcaagaagcagacctgcgatgtgaatatgaaagtataaagcaacaa
tttgaatctctgaagcgcaacagcgagaaagaagtagcatttttaaaagacaagttttcg
caattggcatccaaagcaacccaaggcaccgtaaatgaatcatttaataatagcataaga
agattgattaaggaaagtccagtgaatttccatcgaacccctgtgtgtaaccgaagcagt
caggattttatagatttggatgactgtgttacaccaccgtgttcaggtgcatcacaatca
gtgatcgaaattaacgattcgtctcatggagatatagcagacgactcacctcttcccgct
tccagcatgggaatgtttggaatccaacgggctaaaatgcttggcactgacactagctcg
aagttctcgatttttaaatcgaagcaaccgtctttttcggaatctactagcagtaacaaa
ctgaaaagtaacagtgtaacatacgacggtttaggtggatccagtaaagaggacattttt
ccaactccaatgggcgtgaaaagatcaagaccattaaaaataacattatctaaattgaag
aaattgtcagctgatgcaggtagaagcagaaaaccggcgtcggtttttaccaattttctt
gatttatcttag
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