Dendroctonus ponderosae (mountain pine beetle): 109545040
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Entry
109545040 CDS
T04899
Name
(RefSeq) septin-interacting protein 1
KO
K13103
tuftelin-interacting protein 11
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpa03041
]
109545040
Spliceosome [BR:
dpa03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109545040
Other components
Complex C specific factors
109545040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
109545040
NCBI-ProteinID:
XP_048516572
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MEDDMEKFEITDYDLENEFNINRPRKGLSKQQQIYGIWADDSDDEPETKKTHRNSNKPKN
YSAPIGFVTGGVQQAGKKTKQPEVKHESEDEHKPGTSFRVQHSSESEEEAPRIGRCFVGF
GTSQGRKAPQQATMMETTADIAGFRTKSKVDPALINQGMGNWEKHTKGIGAKLLLQMGYE
PGKGLGKDLQGIAAPVEAHLRKGRGAIGAYGPEKAASVPKLKEQIKPKEGDDRDLKGPSK
WKRTDVAAKKSRYYYRSVDDVIEKGKKPGRAQNSISSELAKVKVIDMTGPQQRVLSGYHA
LSGLKAPAGVEHFEDVVHKKCQNFALPEIQHNLNMLVDMCEQDIIRTDRETRLVEDKLVA
LNQEQVIIKNEITEEDKLVNNLKHVLDVVDKLLDPFQDYSLGQIGEIFRGLLKDYTEEYR
RYELGELAPGLVGPLLTSALANWNPLQQPSQYTDLFDQWKAILEEPQQRGTLEGNKVGIQ
PYDSLIWHTWVPVMRACISSWNPRNCDPLINLIEAWKPTLPMWILNNAYDQMIMPRILEA
VNGWNPLTDTIPIHLWIHPWIPLLDERLHEKVYPIIQEKLGAALSGWHPSDRSAKLMLQP
WQRALSPGSFLAFLLKHIVPKLQHCMQSMLINPHQQLLDPWQWVMDWKDMLSISNMTLIL
DKFFFPRWLQTLAMWLNHSPNYTQVTEWYSGWKRMLSVDLLAQPTIKDSFHKALEMMSRA
TTIIQQPGAKESISYLSSSGVNSTPAAPAPPKIDSFAEAVRTAAKIPQGFKDLVTKRCEE
RGILFVPIPNKYHEAKQVYRIGTNGVQCYIDRNVIFYSQNGSTWIPTSLNRLLDVSC
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacatggagaaattcgaaatcacggactacgatctggaaaacgaattcaac
atcaacaggccccgtaagggcctgagtaaacagcaacaaatctatggaatatgggcggac
gatagtgacgatgagccggaaaccaagaaaacccacaggaacagcaacaagccgaagaac
tattcagcccccattgggtttgtaactggcggcgtgcagcaagccggtaagaagaccaag
caaccagaagtaaagcatgagtctgaggatgaacataagccgggcacctcgttccgcgtt
cagcacagctcagagtccgaagaagaagccccaagaataggtcgttgttttgtaggattt
ggcacctctcaaggcaggaaagccccacaacaagctacaatgatggaaaccactgcagat
atcgcaggattcagaacaaagagtaaagtagacccggctttaataaaccaaggaatgggc
aactgggagaagcacaccaagggaataggggccaaattgctactacaaatgggctacgag
ccgggaaagggactcggcaaggacttgcaggggattgcagccccagtagaagcccatctc
aggaagggcaggggcgccatcggagcctacggcccggaaaaagctgccagcgtcccaaaa
ctcaaagaacaaattaagcccaaagagggggacgacagggatctaaaggggccgtcgaaa
tggaaacgcaccgatgtggcagccaaaaaatcccgctactactacagaagcgtggacgat
gtaattgaaaaaggaaaaaaaccaggcagagctcaaaactcgatctccagcgaacttgcc
aaggttaaagtcatcgatatgactggtccgcagcagagagttctaagcggctaccatgct
ctgagcggcttgaaagcccccgcaggagtcgagcactttgaggacgtcgttcacaaaaaa
tgccaaaactttgcgttgcccgaaatacaacacaacctaaacatgctggttgatatgtgc
gaacaagacataatacggaccgacagagagacccgacttgtcgaagacaagctggtggcg
ctaaatcaagagcaagtgatcatcaaaaacgaaatcactgaagaagacaaactggtaaac
aacctgaaacatgttctggacgttgtcgataaactgctcgatccgttccaagactattcc
ctgggccaaataggggagatatttagaggcctcttgaaagactatacagaggaatatcgc
cgttacgaattgggcgaattggcccccggcttagtcggtccgcttctcacatctgcatta
gccaattggaatccgttgcaacagcccagtcagtacacggacttattcgaccaatggaag
gcgattctggaagagccccaacagcgtgggactctagaaggtaataaagttggaatacag
ccatacgatagtctcatatggcacacttgggtgccagttatgagggcttgcattagctcg
tggaacccgcgcaattgcgacccgctgattaatctgattgaggcctggaagcccacgctt
ccgatgtggatactcaacaatgcctacgaccagatgattatgccccgaatcttggaagca
gtaaacggctggaatccgctaacagacaccattccaattcacttgtggattcatccttgg
attccactgcttgacgagaggctgcacgaaaaagtgtacccgataatccaagagaagttg
ggcgccgccttgagcggctggcatccctccgaccgatctgctaagctaatgctgcagccc
tggcagcgcgcgttgtctccaggctcgtttttagccttcttgctcaagcatatcgttccc
aagttgcagcactgcatgcaaagcatgctcatcaatccccatcagcagcttctagacccc
tggcagtgggtgatggattggaaggacatgctgtccatctccaacatgacgctcattctg
gataaattcttcttcccccgatggctgcaaacgttggccatgtggctcaatcattccccc
aactacacacaagtaaccgagtggtattccggatggaaacggatgctgtcagtcgatttg
ctggcgcagcccaccatcaaagacagtttccacaaggcgctggaaatgatgagcagagcg
acgaccataatccagcagccaggagccaaagagtcaatttcctacttgtccagcagcggg
gtcaattccacgccagccgcacctgcacctccaaaaatcgacagcttcgccgaggctgta
aggacagcggcgaaaatcccgcaaggattcaaggatctagtgaccaaacggtgcgaagag
cgcggcattctgtttgtacccattccgaacaagtaccacgaagccaagcaggtttatcgg
attggaaccaacggggtccaatgctacatagacagaaatgtgattttctacagccaaaat
ggctcgacgtggatacccacctccctgaatcggctattggatgtgtcgtgttga
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