Dendroctonus ponderosae (mountain pine beetle): 109545274
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Entry
109545274 CDS
T04899
Name
(RefSeq) CDK5RAP1-like protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpa03016
]
109545274
Enzymes [BR:
dpa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
109545274
Transfer RNA biogenesis [BR:
dpa03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109545274
Prokaryotic type
Methylthiotransferases
109545274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Fer4_12
Motif
Other DBs
NCBI-GeneID:
109545274
NCBI-ProteinID:
XP_019771419
UniProt:
A0AAR5QDX0
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MNLSVKSPIFHTVVKSALKSTHFSKSVFGLRYISCTNISCNQAPAQDGGQGAPATTAEFR
NKLLNGPNLKDFFKDEHLKQQDHLPDEEVVPYLIQSMTYGENRKVFFEVYGCQMNVSDTE
VIWSILKNSHYKKTDDIQEADVILIVTCAIRESAEERIWGRLESLKGIRRTRSKTRPNLK
IGILGCMAERLKQKVLETDKSVDLVVGPDAYRDLPRLLALTANDQKSINVQLSFDETYAD
ITPIRLNENSVSAFVSIMRGCDNMCTYCIVPFTRGRERSRPVSSILKEVEHLSQNGVKEI
TLLGQNVNSYRDTSEIDSTENVTSLAKGFKTVYKLKKGGLRFADLLHRVSELNPEMRVRF
TSPHPKDFPDEVIEVIRNQANICKNLHMPAQSGNSAVLERMRRGYTREAYLELVAHIRNR
IPDVALTSDFICGFCSETDEEFEDTITLMEEVKYHSAFVFPYSMREKTTAHRRFKDDVPQ
EVKMQRLQRMIEVYRRHSYVLNCSEIGHTHLVLVEGLSKRSDQCFQGRNNNNVKVILPGT
DPIPAKNGQYMKLLKPGDYVAVHINAASSQVLKGIPLYYTGLQEFYEKHDWHHAADRLTL
PFQG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttagcgtaaaatcaccgatatttcacacagtcgtgaaaagtgcattgaaatca
acacatttttcaaagtctgtctttggactgcgatacatctcgtgtacaaatatcagctgc
aatcaagcaccagcacaggacggtggtcaaggagcgcctgctacaactgctgagttcagg
aataagttgctaaacgggcctaatttgaaggattttttcaaagacgaacatttgaagcaa
caggaccatttaccagatgaagaggtggtgccctacttgatccaatcgatgacttatggc
gaaaacagaaaggtatttttcgaagtatatggatgccaaatgaatgtgagtgatacagag
gtaatatggtcaattcttaaaaacagtcattacaagaaaacggatgatatacaagaagcg
gacgttattttaatcgttacttgtgccatcagagaaagtgcagaggagcggatttggggc
cgtttagaaagtctcaaaggcattagaaggacaagatcgaaaacacgacctaatttgaaa
atcggaatactgggatgtatggccgaaaggctcaagcaaaaagtgttggaaaccgacaaa
tcagtggatttagttgttggtccagatgcctatagagacttgccaaggctcttagctttg
actgccaatgatcaaaagtcaataaacgtgcagctttcgtttgatgaaacctatgcagat
atcacacccatacgattaaacgagaattcagtgtctgcctttgtgtctatcatgagaggg
tgcgataatatgtgcacgtactgtatagttccgttcactagaggcagggaacgctcgcgc
ccagtcagttcgattttaaaagaagttgaacatctatcgcaaaacggagtcaaggaaatt
acattattaggccagaacgttaatagctaccgggatacatctgaaatcgactcgacggag
aatgtgaccagcttggccaagggctttaaaacagtgtacaaactgaagaagggtggtctg
cgatttgcggacttattacacagagtttcagagctaaatcctgaaatgagagtgcgattt
acttctccgcatcccaaagatttccccgatgaagtaatcgaggtgatccgaaaccaggcc
aatatttgcaaaaatctgcacatgccggcccagtctggaaattcagcagttttggaaaga
atgagacgcggctacacaagagaggcatatttggaattagtggctcatattagaaaccga
attcctgatgttgctctgacttccgatttcatttgcggcttttgttcggagacggacgaa
gagttcgaagatactatcacactgatggaagaagtcaagtatcattcggcctttgtgttc
ccttatagtatgcgcgaaaaaaccacagcccatcgtcgattcaaagacgatgttccccag
gaagtgaaaatgcaacggctgcaaaggatgatcgaggtctatcggaggcactcatatgta
ttgaattgctcagagattggtcacacccatttggttttggtggagggattgagcaaacga
tctgaccaatgcttccaaggcaggaacaataataacgttaaggtgatcctgccgggaact
gatccaatacctgcgaaaaatggacagtatatgaagcttttgaagcctggagactatgta
gctgttcacataaatgccgccagctctcaagtgttaaaaggcataccattgtactatacc
gggctacaagagttctatgaaaagcacgactggcatcatgctgctgatagattaactttg
cctttccaaggctaa
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