KEGG   Dendroctonus ponderosae (mountain pine beetle): 109545509
Entry
109545509         CDS       T04899                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03013  Nucleocytoplasmic transport
dpa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109545509
  09122 Translation
   03013 Nucleocytoplasmic transport
    109545509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpa03019]
    109545509
   03041 Spliceosome [BR:dpa03041]
    109545509
Messenger RNA biogenesis [BR:dpa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109545509
Spliceosome [BR:dpa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109545509
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_THOC3 WDR55 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR41 WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_Gbeta Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_LRRK2 Beta-prop_ACSF4 Beta-prop_DCAF12 EIF3I Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_CAF1B_HIR1 WD40_like Beta-prop_RIG_2nd Beta-prop_WDR19_1st WDR54 Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 109545509
NCBI-ProteinID: XP_019771815
UniProt: J3JWT5
LinkDB
Position
Unknown
AA seq 330 aa
MANKLNKEFYNTVLAQAFSPCGTLLITGDAYGTLSVFNLSKVVNPVGNITKEELVPRNRI
VVKADYQVNSLLSTPKHLLVGGYGEIYAYLWNNIKGSNRNVQATWSIEIPSGQNSFNKAE
VNAMLFNKNTGTFYAGCGDNKVYCFNLETRKCLKVLSGHSDYIHAICKTGDNNLISCGED
GLVNIWDLRTNKVTDKLEPHLNGKVARNELGKWLGAVDCNEDYIVCGGGPRLTLYHYRFL
TNSTIFPIDDQGIHVAEIYDDKVLAGGKSKLFYQASFNGDIITEIPTSAVTTYSVVKHEE
PFRIMCIAGSSPKIDVSLNFMYKDQQLSLY
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcaaacaagctcaataaggagttctacaatactgtattagcccaagcgtttagtcca
tgtggaactttgctcataactggagatgcttatgggactctgtcggtcttcaacttatca
aaggtggtgaaccctgtggggaatataactaaagaagaactggtgccccggaaccgaata
gtggtgaaagccgactaccaagtcaacagccttttatccaccccaaagcacctgcttgta
ggcggatatggggagatttacgcctatttatggaacaacatcaaaggatcgaataggaac
gtgcaagcgacctggtcaatcgaaatcccttcgggccagaacagctttaataaggccgaa
gtcaatgcgatgctgttcaataagaacaccggcactttctatgctgggtgtggcgacaac
aaagtctactgctttaatctggaaacccgaaagtgtctcaaagtgctcagcggacattcg
gactacatacatgccatttgcaaaactggagacaataatctgatctcatgtggagaagat
gggctggtaaacatttgggacttgagaaccaacaaggtaaccgataaactagagccccat
ttgaatggcaaagttgctagaaatgagctgggaaaatggttaggagctgttgattgtaat
gaggactacattgtgtgcggcggtgggccccgtttgactttatatcactatcgtttcttg
acgaattccacgatttttcccattgatgatcaaggcattcacgtagccgaaatttacgac
gacaaagtactggccggaggcaagtccaaactgttctaccaagccagctttaatggcgac
attataacggaaattcctaccagtgcagtcaccacttacagtgtggttaaacatgaggaa
cctttcaggataatgtgcatagccgggtcgagccccaagatagatgtttcgctcaatttc
atgtacaaggaccagcagctctcgttgtattaa

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