Dendroctonus ponderosae (mountain pine beetle): 109545619
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Entry
109545619 CDS
T04899
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpa03000
]
109545619
03036 Chromosome and associated proteins [BR:
dpa03036
]
109545619
Transcription factors [BR:
dpa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109545619
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109545619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109545619
NCBI-ProteinID:
XP_048518188
LinkDB
All DBs
Position
Unknown
AA seq
2002 aa
AA seq
DB search
MPRTVPQASQMNQQEFEAIVVRLEHEIKYMGLSLQEQVTRCAEKFRKTGNTPQYIQKIAN
ILEKFDEYVKKHACSIQKRIEDAGLQDKYADSLKTLRALSSQDEHTETVQCSSELAPIRK
QTFSEADKICNETTVQQPTTNNTDAHSSSQTNQEGVCGEKCIPVASEPVQSTEMIQSVPI
ILSSDSDDELNSTQAQTKSTSSPNVDNMSINSDETVRLDGPREIDSDNTIVDPTDMMETQ
LNSRNSTESEVFNGPEADDLSVVSLDSTKYDQSGASGDLQPDCKATSNNGKQTPKELEEN
GGAESSDESNINAHFKSKMNDKDRKLLFTLIGKFFKDLQNNQQNNESSSDEAREPVKKGR
MLKKIRKKSRIRAQTVDEKPIVQDCSIRLVKMNTSAIAAAANSSLSSVPESEETENEIIK
FRRKKCRPIPSDESESQLGSEQERTDSNLQDSKRKRPSSNSESFSCSSHSATKIRKLSST
GDNSDSAYCMDSKARDRLLNMLIEQNSRTQKASDSKEITAKQGQKELGDSAGINLLQQKE
LDGAAEDALLKTDSDEEDEIQSNPDGGCKAFKFTESQRSKLLDLLTGVVENGVIRSDAES
SSESHVDNKRTLTVANVSREELNQLLSEFEETVVLKARDTGHEDVKCAEERVESSDPEND
LIDILREEVISTKRGPGRPRKSVESWNAFNSLMKSEDDISDSSSSISLFSDLEAALSDQE
ETHEVKQAEAAQWEQKSAFKKELIVIVRRLDLSKYETSQFSKGSDDRPCNLDNAVESRGS
SPASPPRGNWVQSTSSEFSGSSLSSFIASECGSDVEYADSPEDCAHLAKSLWDKICSSSD
EKSSVKCSTSSSSASEEEEESSKDAGVQKWAGQRKRSPSWCADPLLRADPLIGEHRQKRK
RSKTRIPPSPLASDSDATYVENARHPKRNFFADLSDDSDFEIIEGYKTPEEAIIITDEEE
GSSSKKGKGRRNIRAVVEDQDLAEATQRANNEERERIKRLQEREKSKENCTHYASEEEAN
PLILDALDSVEVKVHPSITKKLKPHQRSGIQFMWDSCYESIKQLKMGYVSSGCILAHCMG
LGKTLQALALIEALFRNPITNTKYVLVVCPLSTVSNWRNEFNLAYEGIRNLNIRLFTIED
KKTSIRKFDITIEWRRKGGVLVLGYECFGMMINQQKLDRLAKDGIDKALILQALVDPGPD
LVICDEGHLLRNKQSQRTVAMNQINTKRRIVLTGTPLQNNLLEYYCMVNFVKPSLLGTEK
EYKTNFANPITNGQFEDSTAEDIMLMKKRTHVLHKILHRTVQRVEDTELKRYLPKLIDQA
VFIQMSDLQVNLYNTYLDSTDLRPIVYTKSGTISRKNFLADMQVLQYICSHPNVLTTAEK
TSKAKIKEQDVIEDHMDVDVDANVLRKGDWHKALLSMDGTRQLGMGTKFLVAIGIVKEAA
AAGDKVLIFTHSYAEMDNLELFLSESLQFVKYVDYYRMDGTIIPEARSVICNKFNDPNNS
QVKALIVSTRVGGLGLNLTAANRVIIMNVSWNPSNDTQSVFRAFRFGQEKPVFVYRLIAI
DTMEEKIYQRVVTKLAVAHRVVDKHQITRHYTASDIQEYYAIRPRIRRDRPLPNVPEDRV
LANLVRKHEEVFRWHEHQALLANRPEEDLNEQQKNAAWEEFYNRTDQAPPVRSVDDPSSA
RHLPGPSGMQARFQNDMENAASAGPGFSAVTPPYHTNPLSSRMRFQQRPVPAPTRYQLLP
ILRPPLSTTRQLFPLGVWAMKRNLVLTRVASADEFRPVYTRRRRGRPSSRRLPGEERKTT
SIQPAAASSSKAVEEFPTAQIPRAPTSNSSNLSRLGSVAAIQVLATPSRKFRDHLHDLQL
NKKNYSSANQLQSVAAASAGSSSRSADLQPSKPITLDSMAAINPTPRLPKLKVKPRFGGI
IRSLFQSVPSRTYERIRTPPSNSSRQTGTNQIAPPAENVLGGLLRRADNNKEGLNETGID
PSTRMVSGSKTGDFNQVVFTVC
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaacagttcctcaagcaagccaaatgaaccaacaagagtttgaagcgattgta
gtccgcttggagcacgagatcaagtacatgggattgtcgttgcaagagcaagtaaccagg
tgtgcggaaaagtttcgcaaaactggaaacacgccccaatacattcagaaaattgccaat
attctggaaaaattcgacgaatacgtcaagaagcatgcctgttcgattcagaagagaatt
gaggatgccggactgcaagacaaatacgcggattctttgaagacgttgcgagcgctttca
agtcaggacgagcataccgaaactgttcaatgctcctccgaattggcgcccatcagaaag
caaactttctcagaggccgacaaaatttgcaatgaaacaactgttcaacagcctactacc
aacaatactgatgcgcacagctcatcacagaccaaccaagagggtgtttgtggagagaaa
tgcattccagtagcgtctgagccggtgcaaagcactgagatgatccaaagcgtgccaatt
atccttagcagcgactccgatgatgaactcaactcaactcaggcccaaactaagtcaacc
agcagccctaacgtcgacaatatgtcgataaacagtgacgaaactgtgagattagatgga
ccgagggaaatcgactcggataacaccattgtagacccaactgatatgatggaaacccaa
ctgaattcacggaacagcacagagagcgaagtattcaatgggccagaggccgacgattta
tccgtagtttcacttgattccaccaaatacgaccagagcggtgcttcaggagatttacaa
ccagactgcaaagctacaagcaacaatggcaagcaaacgcccaaggaactagaggagaac
ggtggtgcggaaagctcagatgaaagcaacattaatgcccacttcaagagcaagatgaat
gacaaggacaggaagcttctatttacgttaatcgggaagttcttcaaagacctgcagaat
aaccagcaaaacaacgaaagtagcagcgatgaggcgcgggagcctgtgaagaaagggcga
atgctaaaaaaaattcgcaaaaaatcccgcattagagcgcaaacagtagacgaaaagcca
atagttcaggattgcagtattcggctggtgaagatgaacactagcgcaattgcggcggct
gcgaatagtagtcttagctccgtccctgaatcggaggaaactgaaaacgagatcattaaa
tttcggagaaaaaaatgccgccccatacccagtgatgagtcggaaagtcaattggggtct
gagcaagagagaaccgattccaaccttcaggactccaagagaaaaagacctagtagcaat
tccgaatctttctcctgcagtagccattcagcaacaaagatacggaaattgtccagcact
ggcgataactcagacagtgcgtattgtatggacagtaaagccagggacagactcttgaac
atgctcatcgaacaaaactcccgtacgcagaaagcatcggattcaaaggaaataactgcg
aagcagggccagaaggaactgggcgacagcgccgggatcaacttgcttcagcaaaaggag
ctggatggggctgcggaggacgcgctgctgaagacagacagtgatgaagaggacgaaatc
cagtcaaacccagatggtggatgcaaggcgtttaagttcacggaatcccagcgaagcaag
ctgttggatcttctgaccggcgttgtggaaaacggggttattcggagcgacgccgagtcc
tcttcagagtctcacgtggacaacaagcgcacgttaacagtcgccaatgtgtccagggaa
gaactgaaccaactgctgagcgagtttgaagaaactgtcgttctaaaagcgagagacact
gggcacgaagacgtgaaatgcgctgaagaacgtgttgaaagttcagatccggaaaacgac
ttgatcgacattctccgagaggaagtgatcagcacaaaacgaggtcctggacgaccgcgc
aaaagtgtggaaagctggaacgcattcaacagtctgatgaaaagcgaggacgacatatcc
gatagtagctcatccatatcactattcagtgatttggaggccgcactgtccgatcaggag
gaaacgcatgaagtgaagcaggcagaagcagctcaatgggaacagaagtccgccttcaag
aaggagcttattgttatagtcaggcgcttggacctgtccaagtacgaaaccagccaattc
tccaaaggcagtgacgacaggccctgcaatctagataatgctgtcgaaagccgcggctcc
agtccagcctccccacccagaggcaattgggtccagtccaccagttcggagttctccgga
tcgtccttgtcgtcttttattgcctctgagtgcggctctgatgttgaatacgcagattcg
ccggaagactgtgcacatttggccaagagcctttgggataagatttgcagcagttctgat
gagaaaagcagtgtgaagtgctcaacttccagcagttctgccagcgaagaagaggaagaa
tccagcaaggacgctggtgtgcagaagtgggcgggacagcgtaagcgctcaccctcctgg
tgcgccgatccgcttctgagagctgatccactcatcggtgaacataggcagaagcgaaag
cgcagtaaaacccgcattccacccagccctctggcttcagatagcgatgccacttatgtg
gaaaacgcaagacacccaaaaaggaattttttcgccgatttatccgacgacagtgacttt
gaaataatcgagggctacaaaacgccagaggaagcgataattatcaccgatgaagaggag
ggtagttccagcaagaaaggtaaaggtcggagaaacatccgagcagtggttgaggaccaa
gacctggccgaggccactcagcgagccaacaatgaggagcgcgaaagaatcaagcgactg
caggagcgagagaagagcaaggagaactgcacccactatgccagtgaagaggaggcgaat
cctttgattttagacgctttggactctgtggaagtgaaagtgcacccatcgatcaccaag
aaactgaagcctcatcagcgcagcggcattcagttcatgtgggactcttgttacgagagc
atcaagcaactgaagatgggatatgtgagctcgggctgtatcctggcccactgcatgggc
ctcggcaagactttacaggcactagccttgatagaggcgctgtttcgaaaccccatcacc
aacaccaagtacgttctggtcgtatgtccgctgtccactgtctccaattggaggaacgaa
ttcaatctggcctatgaagggatcaggaatttgaacattcgcctctttaccatcgaggac
aaaaagacgtcgatccgcaaatttgacatcaccatcgagtggaggcgaaaaggtggcgtt
ctagtgctcggctacgagtgttttggtatgatgatcaaccagcagaagctggatagactg
gcgaaggacggaattgacaaggccctcattctgcaagcgctggtcgatccaggtccagat
ttagtgatttgcgatgaaggccacctgctgcggaacaaacagtcgcaacggacggtagcc
atgaaccagatcaacacaaaaaggcgcatcgtattaacaggcaccccgttgcagaacaat
ttgctagaatattattgcatggtaaactttgtcaaacccagccttctgggtacggaaaag
gagtataaaacgaactttgccaatccgatcaccaacgggcagtttgaggactcgacagct
gaagatattatgttgatgaagaagcgtacgcatgtgctgcacaagatattgcaccggact
gtgcagagagtggaagatacggaactcaagcggtacctgcccaaactgattgaccaggcc
gtatttatccagatgagtgatttgcaggtgaacttgtacaatacgtacttggactcgacg
gatttgcgtcccatcgtgtacacgaaatcaggcactattagccgaaaaaatttcttagcg
gacatgcaggtactgcagtacatttgcagccaccccaacgtgctgacgacggcagagaaa
acgtccaaggccaagatcaaagaacaggacgtaattgaggatcatatggatgtggatgtg
gacgcgaacgtgctgaggaaaggagactggcacaaggcgttgctctcgatggatgggacc
aggcagctcgggatgggcactaaatttctggtagcgatcgggattgtgaaagaagccgct
gctgcaggcgataaagtgttgatattcacgcactcatacgcagagatggacaatctggag
ctgttcctctctgaaagtctgcaatttgtcaaatacgtggattattaccgaatggacggc
actatcattccggaagcccgctcagtgatttgcaacaagttcaacgatcccaataactcc
caagtcaaagctctcatcgtatccactagagtgggcggcctggggctgaacctgacggcg
gccaatcgcgttatcatcatgaacgttagctggaacccttcaaacgacacccaaagcgtc
ttcagggcgtttcgattcggtcaggaaaagcccgtgtttgtctaccgactgattgccatc
gatactatggaggagaaaatctatcaacgagtcgttacaaagctggctgtggcccatcgc
gtggtggacaaacaccaaatcaccagacactacacggcgtccgatatacaggagtactat
gcaattaggccgaggatcaggcgtgatcggccactgccaaacgtgcccgaagaccgcgtt
ttggccaatctggtgcggaagcacgaggaagtgtttcgctggcacgagcaccaggcgctg
ctggccaatcggcccgaagaggacctcaatgagcagcagaagaacgccgcttgggaggag
ttctacaaccgcacagatcaggcgccgcctgttcgttcagtagacgacccgtcatctgct
cgacaccttccaggcccctctggcatgcaggccagattccaaaatgacatggaaaatgcc
gcttcggctggtcccggtttcagtgccgtgactccaccctatcacactaacccactgagt
tcgcgcatgcgcttccagcaacgtccagtaccagctcctacccggtaccagctcctaccg
atcctaagaccgcctctatccactacccgtcaacttttccctttaggcgtttgggctatg
aagaggaacttagtcttgactcgagtggcttctgctgatgagttccggccagtttatacc
aggcggaggcgtgggcgcccttccagccgccgattgcctggtgaagaacgcaagaccacc
tcgattcaaccagctgctgcgagctccagcaaagcagttgaagagtttccaacagctcaa
atcccacgtgctccaacttcgaactcttcaaatttatcgcgattgggatcagttgcggcc
atacaagtgttagcaacgccgtcgcgcaaattcagggaccatttgcacgatcttcagctg
aacaagaaaaattactcgagtgccaatcagctgcagagtgttgcagctgcttctgctggc
tcttcgagccgttctgctgatttgcagccgtccaagccgatcactctggattccatggcg
gccatcaatccgacaccccgactgccgaaattaaaagtcaagcctcgtttcgggggcatc
atcaggtcgttatttcaatctgtgccaagtcgtacctatgaacgaatcagaacgccgcct
tctaatagtagccgccagacagggaccaatcagattgcaccaccagcagaaaatgtttta
ggaggcctgctaaggcgggccgacaacaataaagagggccttaacgagactggcattgat
ccgtcaactaggatggtgagtggctccaaaacaggagatttcaatcaagttgtatttact
gtctgttaa
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