Dendroctonus ponderosae (mountain pine beetle): 109545709
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Entry
109545709 CDS
T04899
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X5
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109545709
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpa01009
]
109545709
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpa04131
]
109545709
03029 Mitochondrial biogenesis [BR:
dpa03029
]
109545709
Protein phosphatases and associated proteins [BR:
dpa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109545709
Membrane trafficking [BR:
dpa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109545709
Mitochondrial biogenesis [BR:
dpa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109545709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
ubiquitin
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
109545709
NCBI-ProteinID:
XP_019772101
UniProt:
A0AAR5QFX9
LinkDB
All DBs
Position
Unknown
AA seq
1517 aa
AA seq
DB search
MVYIFFVQSGTMMTFENEISIMQSVADLKRKIFEKCHIPIERQVLLISGGEPLDSSKNLC
SYMAGTDTNPIYLFSTNFDVSQLDSGKYLQLDDEELRKRLIDARCLPISVNTVKTRTLVS
QDFASAAKDQLEFCENLVHEQHLQQQGWFAVIANLEDIGMEFRKRWELFQRMYREFRADR
ATYDDFLVSFEADKRILQKIPVVATLLESGNNTMEESKSEIASNVSESESDKEITLYDWI
SSDNKNSLDELYELCKSSLSKFEQEIMPSLTKNIDEALLNAETTERKEIEGLEKRLCDLD
DLVRKVKAYVECQTTMAQSFLQHKQSVTNIKDNSILPELSVSHMHQLTLILETHEKLMED
RNRIIKAKFELSKSLCFRIGWVQQVEGKLWELDNLLVYFHEHLQRLRKHLEVFQQLHIAP
IIYMNALVEVVRRRLFSQLFLLWASDLACQQLTIYNEEVTRRKDFNALFDGHFLSALFPG
MSDIPPTFATEAPTMFDAQLPNVSAEDIEKLRKQVPDFIENLIVPDMSHVANFFTGKVSG
KEKVDDIFRGIEDKLIQAVSDVGLASQLDQNMLKTSSESCLVSAPGVSVPKDDKGCESET
DTEEFEKVGQSPMELGFPQGEFTGTESKVTEKIDVSTITEENLQISRLEHEKLKNIVVNL
SGIAKLATANLRTDLNTFKVQFETESRSLSQQYGDLGSSWETLLIEVDKNEQEIVRCMRQ
ECSEQKDQYQYNLMEKEELIKRLDRDNRKLENDLKLTSVKVKSLEALLDKQNTETASKIE
TLTKQLQQKELDHRTELDNIKSRFKMITMEKSPSLTSLEKERSSDFALDSTLFLQMTENF
ELDKAQAVAEERARWELILEDKVQERCKVLSREITRRISHDKDLQIDALTRRETDLNLKI
IKYQTIIDQLTDRESNSETGLGQEFEKSEGRIEGALSRADIDHGAMTFSTFVDNEKKLES
TFAGLTKSEIGTGQADDLNFNGFKIGALVLVCWDEVYKNYTIYQHSKQLYFLHFDSLANL
GLNIVKGQPNKTRCIGQVIDKELCETLKETNRLNIPKGTKFFLVKVKPVNAIPEKANYPS
LEKGAECSETATGCNQTVSLGLDATCKLPDEVILSDIEKQLEQDSAIVDRIEQASITIND
SERSDVDSTLGQPHFSELGASQPPFERRSNSESEEIELLKRDNQQLKDQLASFTGEKSAL
MTTSVAVYEGKMDAATSPLEAFPAIPDMSRSETSTRPHRLSIDSCKIGDVVLLLWDPVHE
NFKILQESKHTYFPHSDCLEKLGLLVTEGKPNKLYCLGEVVDREYCQTRKSENRYKVPKG
AKFFRVKLKPISAAHREAADLSQSVYLPKQASAMSTSHSVATTFGPLVEETQCQFNFAEM
SVMTFGSIDNVGDRPCPSETVEIPSSDDRGLSELPAENPTADTNEKPFAEDSGIQEVFPG
LGDIDGIHRRIKSQSLECLRSNTTETYTSPRRSDWLEYYLRKKNGHNFYAYSIIIIIFII
FMLIATVVLKSSFEYIF
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacatattctttgtccagtctggaaccatgatgacttttgaaaatgagatctcc
attatgcagagtgtggcagatctcaagagaaaaattttcgaaaaatgccatattcccata
gaacgacaagtacttttgataagtggtggagagcctttagattcaagtaagaatctatgc
tcatatatggctggcactgataccaatcctatttacttgttctcaacaaattttgacgtg
tcacaactagatagtggaaaatatcttcagttagatgatgaagaattaagaaagcggctg
atagatgcccgatgcttgccgatttctgttaacacggtgaaaacacgcaccttggtatct
caagatttcgcgtctgcagccaaggatcaattggagttttgcgaaaacttggttcatgag
caacatttacaacaacaggggtggtttgctgttatagctaatctagaagacattggaatg
gagtttcggaaacgatgggagttattccaaagaatgtaccgagaatttagagcggaccgt
gctacctacgatgactttctcgtaagctttgaagctgacaagagaattctccaaaaaata
ccagtagttgcgacgttactggaatcgggaaacaacacaatggaagagtcaaagtctgaa
atagctagtaatgtatcagaatcagaatccgacaaggaaattactttatatgactggata
tcatctgacaataaaaattcgctggacgaattatacgaactttgcaaatccagtctgagc
aagttcgaacaggaaattatgccttctttaacaaaaaatattgatgaggctttgcttaat
gctgagacaacagaaaggaaagaaatcgaaggactggagaagcgactgtgcgatttggat
gatctggtcagaaaagtaaaggcttacgttgaatgtcagactacgatggcgcaaagtttt
ttacaacataaacagagtgttactaatattaaggacaattcaatacttcctgagttgtct
gttagtcatatgcatcaattgactttaatactagaaactcacgagaaactaatggaagat
agaaatcgcataatcaaagctaaatttgaattgagtaaaagcttatgcttcagaattggt
tgggttcaacaagtagagggaaaattgtgggagttggataatctattagtatattttcat
gagcatttacaaagattacgaaaacatttagaagtgtttcagcagcttcatattgctcca
ataatctatatgaatgcattagttgaagtggtcagacgacgattattttcacaattgttc
ttgctgtgggcatctgatcttgcctgtcaacaacttacgatttataatgaagaagttacg
agaagaaaggattttaatgccttatttgatggacattttctttctgcgcttttccctgga
atgagtgatatcccgcctacttttgctacagaggcacccactatgttcgacgctcagcta
cccaacgttagcgctgaagatattgagaaacttcggaagcaagttcccgattttatagag
aatttgattgttcctgacatgagtcacgttgcaaatttttttactggaaaagtttctggg
aaagagaaggtagatgatatttttcggggcattgaagataaattaatccaagcagtatct
gatgtgggacttgctagccaattagatcagaatatgttgaaaacaagcagcgaatcttgt
ttagtttccgctcctggggtatcggttcctaaagatgacaagggctgtgagtccgaaacg
gacacagaagaatttgaaaaagtgggtcaaagtcctatggaacttggttttcctcaaggt
gaattcactgggactgaatccaaagttactgaaaaaatcgacgtttcaactatcacagag
gaaaatcttcaaatttcaagattagaacatgaaaagctcaagaacattgtggttaacttg
agcggaattgcaaaactggcaacggcaaatttgcgcacagaccttaacacttttaaggta
cagtttgaaactgagtcacggtctttatctcagcagtatggagatttgggtagttcttgg
gagacgctgctgatagaggttgataaaaatgaacaagaaatcgtaagatgcatgaggcag
gaatgctctgaacaaaaagaccagtaccagtacaatttaatggaaaaagaagaactgatt
aaaagattagatcgcgacaatagaaaactggaaaacgatttaaagctaaccagtgttaaa
gtaaagtcattagaggcactattggataaacaaaatacggagacagcatcgaaaatcgag
acacttactaagcagttacaacaaaaagaattggaccatcgtactgagttagataatatt
aagtctaggttcaagatgattactatggagaaaagtccttcattaacatctttagagaag
gagagaagctccgattttgcattagattcgacattatttttacaaatgactgaaaatttc
gagttagataaagcccaggctgttgctgaagaaagagcgcgctgggaacttattttagaa
gataaagtgcaggaaaggtgtaaagtattgtcccgagagattacacgacgtataagtcat
gataaagatttacaaattgatgcgctaacacgacgagaaaccgatctcaacctaaagatt
ataaaataccaaacaataattgatcaactaactgatcgtgaaagtaactctgaaaccggt
ttgggtcaagaatttgaaaaaagtgaaggtcgcattgaaggcgcgttgtcaagagctgat
attgatcatggagcaatgacattttcaacatttgtggataacgaaaagaaactggaaagt
acattcgctggtcttactaaaagcgaaattggtactggtcaagctgatgatttgaatttt
aacggttttaagattggagcgcttgtcttagtatgctgggacgaagtgtataagaactat
acaatttatcagcattcaaaacagttgtattttttacattttgattcattagcaaatctt
ggattgaatatagttaaaggtcaaccaaacaagacacgttgcattggccaggttattgat
aaagagttatgtgaaactttgaaggagacaaaccgcttaaacattcctaaagggaccaag
ttttttttggttaaagtaaaaccggtcaatgccatacctgaaaaagcgaattacccttcg
ctcgaaaaaggtgcagaatgctcagagactgcaaccggttgcaatcaaacagtttcatta
ggcctagatgcaacatgtaaactgcctgatgaagtgattttaagtgatatcgaaaagcaa
ttggaacaggatagtgcaattgtggatagaattgagcaggcttctattacaataaatgac
agtgagcggtcggatgtcgatagtactttggggcaaccgcacttttcagaacttggagct
tcgcagcctccatttgaaagacgcagtaattctgaatctgaggaaatcgagttgctaaaa
agagacaatcagcagctcaaagatcagctcgctagtttcactggcgagaaaagtgcgttg
atgacaacatctgtggctgtgtatgaaggaaaaatggatgcagctacaagccccttagaa
gcttttccagcaataccagatatgagcagaagtgaaacatcaactcgtccacatcggtta
agtattgatagttgcaaaataggagatgtcgtattattgctgtgggatccagtacatgaa
aactttaaaatattgcaggagtctaaacatacatattttccccattcagattgtttagaa
aagcttgggttattagtcacggaaggtaaaccaaataaattgtactgcctgggagaagta
gtagatagggaatattgccaaacaagaaagagtgagaatcgttacaaagttccaaaagga
gctaaattcttccgagttaagttgaaaccgatatctgctgctcatcgtgaggctgcggat
ctatctcaatccgtttatttaccgaaacaagcttctgcaatgtcaaccagtcattcagta
gcaacaacattcggaccacttgtagaagaaacacaatgccaattcaatttcgctgaaatg
tcagttatgacgtttgggtccattgacaatgtgggagatcgtccatgcccatcagaaact
gtcgaaataccgtcaagtgatgaccgtggcttgtctgaattgccggcagaaaatcctact
gctgacacgaatgaaaagcctttcgccgaggacagcggaattcaagaggtttttcctgga
ctaggagacattgatggaattcacaggaggattaaatcccaaagtttggagtgtttgagg
tctaacactacagaaacatacacttcaccaagaagatctgactggttagaatattattta
cgcaagaaaaacgggcataatttttatgcttacagtataataataataatatttataata
tttatgctcattgctacagttgttttaaagagcagctttgaatacatattctag
DBGET
integrated database retrieval system
