Dendroctonus ponderosae (mountain pine beetle): 109546237
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Entry
109546237 CDS
T04899
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpa03036
]
109546237
Chromosome and associated proteins [BR:
dpa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
109546237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
109546237
NCBI-ProteinID:
XP_019772689
EnsemblRapid:
LOC109546237
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MFYSHFILAKKGPLARIWLAAHWDKKITKAHVFETNIETSVDGIIKPKVKLALRTSGHLL
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGMVDLPEEHREAAVNAITLPEVFHDFDTA
IPELNDVDIEAQFSLNQSRAEEITMREEYGSISLVNPDDGFGDMGFDSDAPELMRHAGDL
EPSMEQSNLLFSEPVLEPESMHKDLSEPMPSTSGTQSHDQPMEIDTGVHDDNLISGGLFE
GGLFDEAPMGEVAPVDTSIPVSSNLPRPPLDSDDDDGDMDNFGGPPSVGGMSSVGGSRPP
TPLNDHSQHPSTRPQSPSHQSVPPQSPAHSMRSMRSLQPTPAPPDLPQVEEPPPAIDQTT
LLQNEEESFALPPVDTTALKDMYLLGVTKTKRKRKLIIDEVKNISGEEMKNQLSDTTDIV
TSLDLAPPTKRLMHWKETGGVEKLFALPARLIPARILFKIYQRHLTLKPIRNEDFAMLGD
ADSLALDQARDHEEPSLEPVVPVKRGRKRKVVEEPSQTPLHVPEETPIHMQSIYHPSPEQ
PLPPSTPMPLHSPLPPPGTPLHPPGTPMGTPMHHPGTPLHAPGTPMHPSQLGLPPGTPGN
VYGIPPPTPSYVGGGYPESSTGMPGQTPLHLPEGEMPHLAADQVQSILQQQENLGLPHMT
PHAHPDDLLTHQQMGLSHPQMSGSHLELPPHYGLDQQHMLSPHMPGVSHMSMGIPSDIVS
HQHLSQEGLASQTPLRSDHHIQPRLPEQPLDQLQEDLPPMDNMGYDQMANMGYDDQLPSQ
TPHAGMSERVHSPWAPDYDLPASVDPTEEQQVDETDEQFEERVLNKRAYQLYLMVRNRLN
DNNRLTLSELCLRNKRKQSAQKFYSLLVLKKFHVLELEQQGAYEEVYVTKGSKFENPVI
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcccattttattttggcgaaaaaggggccgctagcccggatttggctggcg
gctcactgggacaagaagattaccaaagcccatgtctttgagacgaatatcgaaacctca
gttgatggcatcattaagcctaaagtgaagctagcccttcgaacatcgggccatttactg
ctgggagtggttcggatctattcacgcaaagccaagtatttgttggctgattgcaatgaa
gccttcgtcaagattaaaatggcctttaggccgggcatggtggatctgccggaagaacat
cgggaggccgccgtaaacgccatcactttgccagaagttttccacgacttcgacacggcg
attcccgaattaaatgatgtggatatcgaggcccagttcagtctcaaccagtcacgagcc
gaagaaatcaccatgcgagaagagtatggaagcatatcactagtaaaccctgatgatgga
tttggggacatgggctttgattcggatgcgcctgaattgatgcgacatgccggcgatctg
gaaccttcaatggagcagagtaatttgctgttcagtgagcccgtgttggaacctgaatcc
atgcataaagatttaagtgaaccgatgccctcaacgtccggtactcaatcgcatgatcaa
ccaatggaaattgatactggcgtgcatgatgataatctgatatctggagggttgtttgaa
ggcggccttttcgatgaagcgcctatgggcgaagttgcgccagtagacacgagtattccg
gtatcttcaaacctgccacgaccgcccttagatagtgacgatgatgatggagatatggat
aattttggagggccaccatcagttgggggaatgagttcggttggaggatcgcgacctcca
acgccgctaaatgatcactcgcagcatccttccacccgacctcaatcaccatcccatcag
tcagtaccgcctcaatcacccgctcacagtatgaggtccatgagaagtttgcaaccaact
cccgcgccaccagatctccctcaagttgaggaaccccctccagccattgatcagacgact
cttctgcagaacgaagaagagagttttgcccttccgccagtcgacactactgcactaaaa
gatatgtatcttctaggcgtgaccaaaaccaaacggaaacgaaaactgatcattgacgag
gtgaagaatatcagcggcgaggagatgaagaaccaactgagcgacaccactgatatagtt
acctcgctcgacttggcgccgccaactaaacgattgatgcattggaaggaaactggaggt
gtggagaagttgtttgcgctgcccgctagattgatacctgctcgcattctcttcaaaatc
taccagaggcatttgacattgaaacccattcgaaatgaagactttgccatgctgggagac
gcagattcactggcgttggatcaggcaagagaccacgaagagccgagcttggagccggtt
gtgccggtcaaacgtggcagaaaaaggaaagttgtggaagagcctagccaaactccatta
catgtgcccgaagagacgccgattcatatgcaatcgatttaccatccctcgccggagcag
ccgcttccgccttccactccaatgccgcttcactctcctttgccaccaccaggcactccc
cttcatccgccaggtacgccaatggggactcctatgcaccaccctggtactccgcttcat
gcgccgggtactcctatgcatccctcccagctggggttgcctccaggtacgccagggaat
gtttatggcattcctccgccgactcccagttatgtaggcggcggatatccggaaagctca
accgggatgcctggtcaaactcccttacatttacccgaaggggaaatgccgcatttagct
gctgatcaagtgcagtccatcttgcaacagcaagaaaatcttgggcttccacacatgact
ccacatgctcatccagacgatctcctgacccatcaacaaatgggtctttctcatcctcaa
atgagcgggtctcatctggaactgcctcctcactacggattggatcagcagcatatgctc
agcccccacatgccaggtgtttctcacatgtcaatgggaattccatcggacatagtaagc
catcagcacctatcgcaggaagggttggcgtcgcaaacgcctttacgcagcgaccaccat
attcaaccaagattaccggagcaacctttggatcagctgcaggaggatttgccgcctatg
gacaacatgggttacgatcagatggccaatatgggctacgatgatcaattacccagtcaa
acgccccatgccggtatgtcggagcgagtgcactcgccttgggctcccgactacgatctg
cccgcttcggttgatcctacggaagagcaacaagtggacgagacagatgaacaatttgag
gagcgagttctgaacaaacgagcatatcagttgtacttgatggtgagaaatcggctaaac
gacaacaatcggctgactctgtcggagttgtgtcttcgcaacaaaaggaaacaatcggcc
cagaagttctacagtttattagtgttgaaaaagtttcatgttctcgaactggaacagcag
ggcgcctacgaggaagtgtatgtaaccaagggctcgaaattcgaaaatcctgtaatataa
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